Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30494
(741 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr 1||... 77 3e-15
SPAC607.06c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 30 0.40
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 1.2
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 1.6
SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces pomb... 27 2.1
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 27 3.7
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 27 3.7
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 4.9
SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr 2|||M... 26 4.9
SPAC25B8.03 |||phosphatidylserine decarboxylase|Schizosaccharomy... 26 6.5
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 25 8.6
>SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 224
Score = 77.0 bits (181), Expect = 3e-15
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = +3
Query: 39 NPVIIAAQARHTASLIFLHGLGDTGHGW---ASTIAGIRGPHVKVICPTASTMPVTLNNG 209
N VII HTA++IFLHGLGD+G GW A+T + + H+K I P A ++PVT+NNG
Sbjct: 6 NSVIINPSVAHTATVIFLHGLGDSGQGWSFMANTWSNFK--HIKWIFPNAPSIPVTVNNG 63
Query: 210 FRMPSWFDL 236
+MP+W+D+
Sbjct: 64 MKMPAWYDI 72
Score = 71.7 bits (168), Expect = 1e-13
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +2
Query: 260 EDEEGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLS 439
EDE GI R+ +H LI E+ G+P+D++L+GGFSQG TYP+RLAG+M S
Sbjct: 81 EDENGILRSAGQLHELIDAELALGIPSDRILIGGFSQGCMVSLYAGLTYPKRLAGIMGHS 140
Query: 440 CWLPRHGYFPGGL-KAPVDLPI 502
+LP FP L + ++PI
Sbjct: 141 GFLPLASKFPSALSRVAKEIPI 162
>SPAC607.06c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 612
Score = 29.9 bits (64), Expect = 0.40
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 620 CASPWYVENLTFFINVLRHD 561
C SPW E LT IN+LR D
Sbjct: 165 CLSPWGTERLTATINILRSD 184
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -3
Query: 376 STLRETTKQNFICRHTGFNFISNQPMDEISGSLNTFFIFRSVASSVLKS 230
+TL ET HT I+ P + IS + NTF S+ SS++ S
Sbjct: 419 TTLTETILTTTYDSHTFLTTITPSPSNSISYTNNTFIPSSSIKSSIVYS 467
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + + LN +T
Sbjct: 723 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSILNSST 766
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + + LN +T
Sbjct: 435 STVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSST 478
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + + LN +T
Sbjct: 615 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSST 658
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + + LN +T
Sbjct: 1899 STVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSST 1942
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + + LN +T
Sbjct: 2091 STVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSST 2134
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + + +N +T
Sbjct: 3063 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSSIVNSST 3106
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + LN +T
Sbjct: 675 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTAITSSTALNTST 718
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + + LN +T
Sbjct: 963 STVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNTST 1006
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + LN +T
Sbjct: 1599 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSST 1642
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + LN +T
Sbjct: 1863 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSST 1906
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + + LN +T
Sbjct: 1959 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNTST 2002
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + LN +T
Sbjct: 2055 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSST 2098
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + LN +T
Sbjct: 651 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTST 694
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + LN +T
Sbjct: 1767 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTST 1810
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + LN +T
Sbjct: 2835 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTST 2878
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + +N +T
Sbjct: 519 SSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTST 562
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S +++ TP +S+A+N T + S+ +SS+ + LN +T
Sbjct: 1059 STVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSST 1102
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + +N +T
Sbjct: 1287 SSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTST 1330
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + +N +T
Sbjct: 2151 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSST 2194
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + +N +T
Sbjct: 2631 SSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTST 2674
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + +N +T
Sbjct: 2859 SSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTST 2902
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + +N +T
Sbjct: 2955 SSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTST 2998
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + +N +T
Sbjct: 855 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTST 898
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + +N +T
Sbjct: 1791 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTST 1834
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S L++ TP +S+A+N T + S+ +SS+ + +N +T
Sbjct: 2463 SSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTST 2506
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = -1
Query: 354 SRTLSAGTPALTSSAINPWTRSVALSIPSSSSGV*RPAFLNQTT 223
S +++ TP +S+A+N T + ++ +SS+ + + LN +T
Sbjct: 3411 STVVNSSTPITSSTALNTSTPITSSTVVNSSTPITSSSVLNSST 3454
>SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 415
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -2
Query: 545 HLKDTTGSLSP*VGI-LVNQQ-EPLSLQGNNHVEVASRIG 432
H+K TG +P + +NQQ EP ++GNN ++S G
Sbjct: 31 HIKLNTGVRAPFKAVDNINQQDEPTLIEGNNESSISSSTG 70
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 521 RTQLYLSNGDK*RHHASRHL*KMLNFQHTKDSHIAHPLPNSKTC 652
RT LYL + R+H+ L + ++ +KD +AH + +C
Sbjct: 530 RTTLYLQHPVFNRYHSETELMRYIHHLQSKDLSLAHAMTPLGSC 573
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/67 (22%), Positives = 30/67 (44%)
Frame = -2
Query: 293 DQWLSQYLLHLQECSVQRS*IKPRGHTETVVERHGHSRSRRTYNFDMRASDASNRACPSM 114
D++LS +Q C P GH++T+++ H S + N + A+ + P+
Sbjct: 653 DEYLSAVSEFIQRCFHFADEASPDGHSDTLIDISDHMSSTGSENRSVGANSDIKVSLPTF 712
Query: 113 TGVTQTV 93
V ++
Sbjct: 713 RMVVLSI 719
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 4.9
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -1
Query: 366 EKPPSRTLSAGT--PALTSSAINPWTRSVALSIPSSS 262
E PS T S+ P+ SSAI P + SV +SI SSS
Sbjct: 127 EYTPSSTESSSLLDPSSVSSAILPSSTSVEVSISSSS 163
>SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1258
Score = 26.2 bits (55), Expect = 4.9
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -3
Query: 340 CRHTGFNFISNQPMDEISGSLNTFFIFRSVASSV 239
C+++ F F+ ++ S N FF+F +V +
Sbjct: 165 CKYSAFTFLPKFLKEQFSKYANLFFLFTAVVQQI 198
>SPAC25B8.03 |||phosphatidylserine decarboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 516
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 544 WGQMTASCLKTFMKNVKFSTYQGLAHSSSIAELKD 648
WGQ + L TF++ F Y +++ELKD
Sbjct: 91 WGQFNRAHLPTFLRTPGFKLY-AWVFGCNLSELKD 124
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -2
Query: 263 LQECSVQRS*IKPRGHTETVVERH--GHSRSRRTYNFDMRASDAS 135
L+E +V R KP + + +V ++S +TY+ D+R +D S
Sbjct: 717 LEELNVYRLIQKPEAYLKRIVHEKLCKPNKSNKTYDGDLRITDIS 761
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,237,816
Number of Sequences: 5004
Number of extensions: 71032
Number of successful extensions: 278
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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