Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30494
(741 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 72 6e-13
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 71 7e-13
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 68 9e-12
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 66 2e-11
04_04_1530 - 34182235-34182336,34182436-34182543,34183627-341837... 49 3e-06
04_04_1532 - 34187153-34187308,34187426-34187551,34187856-341879... 44 1e-04
04_04_1531 - 34184899-34185030,34185130-34185240,34185344-341854... 42 5e-04
08_02_1422 - 26971803-26971900,26974083-26975061 32 0.55
05_04_0074 - 17677298-17677591,17679060-17679197,17682705-17683130 31 0.73
01_06_0962 + 33402971-33403345,33403633-33403767,33408316-33408597 31 0.73
05_04_0076 - 17697893-17697922,17698312-17698707 30 2.2
01_05_0331 - 21057957-21058205,21059213-21059791 29 3.9
12_02_0361 - 17979979-17979982,17980093-17981045 29 5.1
10_08_0047 + 14430437-14430463,14430615-14430714,14431076-144311... 29 5.1
02_01_0144 - 1038547-1039650 29 5.1
10_08_0485 + 18235597-18236256,18236353-18236400,18236522-182366... 28 9.0
08_01_0074 + 530207-532603 28 9.0
06_01_0495 - 3546131-3547588 28 9.0
02_01_0636 + 4768852-4769775,4770638-4771021 28 9.0
01_07_0275 + 42434082-42435152 28 9.0
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 71.7 bits (168), Expect = 6e-13
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = +3
Query: 48 IIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSW 227
I+ + RH A++++LHGLGD G W+ + + P++K ICPTA+T PVT GF +W
Sbjct: 24 IVRPKGRHQATIVWLHGLGDNGASWSQLLDSLSLPNIKWICPTAATRPVTAFGGFPCTAW 83
Query: 228 FDLRTL 245
FD+ +
Sbjct: 84 FDVEDI 89
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 71.3 bits (167), Expect = 7e-13
Identities = 27/63 (42%), Positives = 42/63 (66%)
Frame = +3
Query: 48 IIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSW 227
++ + RH A++++LHGLGD G W+ + + P++K ICPTA+T PVT GF +W
Sbjct: 24 VVRPKGRHQATIVWLHGLGDNGASWSQLLDSLSLPNIKWICPTAATQPVTAFGGFPCTAW 83
Query: 228 FDL 236
FD+
Sbjct: 84 FDV 86
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 67.7 bits (158), Expect = 9e-12
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = +3
Query: 48 IIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSW 227
++ + RH A++++LHGLGD G W+ + + P++K ICPTA T PV GF +W
Sbjct: 57 VVRPKGRHQATIVWLHGLGDNGASWSQLLDSLPLPNIKWICPTAPTRPVAAFGGFPCTAW 116
Query: 228 FDL 236
FD+
Sbjct: 117 FDV 119
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 508 THGDKDPVVSFKWGQMTASCLK-TFMKNVKFSTYQGLAHSSSIAELKDMQEFIEKTL 675
+HG D VV+++ G+ +A L+ + + + F Y GL H + E+ D+ +++ L
Sbjct: 225 SHGRADEVVTYRNGEKSADFLRGSGFQYLNFKPYNGLGHYTIPEEMDDVCKWLSSRL 281
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +3
Query: 48 IIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSW 227
++ + H A++++LHGLGD G W+ + + P++K ICPTA T PV + GF +W
Sbjct: 25 VVRPKGAHKATIVWLHGLGDNGASWSQLLETLPLPNIKWICPTAPTRPVAVFGGFPSTAW 84
Query: 228 FDLRTL 245
FD+ L
Sbjct: 85 FDVADL 90
Score = 36.7 bits (81), Expect = 0.019
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 511 HGDKDPVVSFKWGQMTASCLKTF-MKNVKFSTYQGLAHSSSIAELKDMQEFIEKTLPAS 684
HG D VV +K G+ +A LKT NV F +Y L H + E+ ++ +++ L S
Sbjct: 194 HGKADDVVLYKHGEKSADALKTTGFSNVVFKSYNRLGHYTVPEEMDEVCKWLTANLGVS 252
>04_04_1530 -
34182235-34182336,34182436-34182543,34183627-34183748,
34183817-34183961,34184045-34184097,34184187-34184478
Length = 273
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +3
Query: 27 RMEPNPVIIAAQARHTASLIFLHGLGDTGHGWASTIAGIRGPHVKVI---CPTASTMPVT 197
R+ P P+ AA AR+ + +++LHGLGD+G P ++ P+A PV+
Sbjct: 37 RLVPAPMAAAA-ARNRSFVLWLHGLGDSGPANEPIRNFFSAPEFRLTKWAFPSAPNSPVS 95
Query: 198 LNNGFRMPSWFDLRTL 245
N+G MPSWFD+ L
Sbjct: 96 CNHGAVMPSWFDIHEL 111
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Frame = +2
Query: 254 TPEDEEGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGG-------XXXXXXXXTYPE 412
+P+D+ G+ +A + VH +I EV G+P + + + GFSQGG YP+
Sbjct: 117 SPQDDSGVLKAVENVHAMIDKEVADGIPPENIFVCGFSQGGRTSALHCALTLASVLLYPK 176
Query: 413 RLAGVMSLSCWLP 451
L G S WLP
Sbjct: 177 TLGGGAVFSGWLP 189
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +1
Query: 508 THGDKDPVVSFKWGQMTASCLKTFMKNVKFSTYQGLAHSSSIAELKDMQEFIEKTLPASK 687
+HG D VV F+ GQ L+ + +F Y GL HS S EL ++ +I+ L AS+
Sbjct: 210 SHGIADNVVLFEAGQAGPPFLQNAGFSCEFKAYPGLGHSISKEELYSLESWIKNHLKASQ 269
>04_04_1532 -
34187153-34187308,34187426-34187551,34187856-34187977,
34188058-34188181,34189671-34189821,34190506-34190720,
34191142-34191343,34191423-34191597,34191746-34192055,
34192141-34192356
Length = 598
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = +2
Query: 263 DEEGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLSC 442
DEE + RA VH +I E+ AG V + G SQGG +P+ L G S
Sbjct: 428 DEEDVLRAVQSVHAMIDREIAAGTNPQDVFVFGLSQGGALGIASVLLHPKTLGGCAVFSG 487
Query: 443 WLPRHGYF 466
+LP + F
Sbjct: 488 FLPFNSSF 495
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +1
Query: 511 HGDKDPVVSFKWGQMTASCLKTFMKNVKFSTYQGLAHSSSIAELKDMQEFIEKTLPAS 684
HG ++ K G+ L+ + +F Y L HS EL Q ++EK L S
Sbjct: 518 HGQAGSLIPIKEGRDGIKFLRGLGMSCEFKVYDRLGHSLEYYELDYCQRWVEKILHRS 575
>04_04_1531 -
34184899-34185030,34185130-34185240,34185344-34185465,
34185541-34185664,34185815-34185867,34185984-34186146
Length = 234
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +2
Query: 254 TPEDEEGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGGXXXXXXXXTYPERLAGVMS 433
T DE+ + +A + VH ++ EV AG + + G SQGG YP L G +
Sbjct: 74 TARDEKEVLKAVERVHEMLDGEVAAGTSPSNIFVCGLSQGGALAIASVLLYPMTLGGCVV 133
Query: 434 LSCWLP 451
S LP
Sbjct: 134 FSGSLP 139
>08_02_1422 - 26971803-26971900,26974083-26975061
Length = 358
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 90 LHGLGDTGHGWASTIAGIRGPHVKVICPTASTMPVTLNNG 209
LHG GD G W+S++ + PHV + P + N G
Sbjct: 112 LHGYGDNGESWSSSLEQVPLPHVYPL-PVIEEFGIVPNGG 150
>05_04_0074 - 17677298-17677591,17679060-17679197,17682705-17683130
Length = 285
Score = 31.5 bits (68), Expect = 0.73
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 329 GVPADKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLSCWLPRHG 460
G ++V+L G SQGG +PER+A V+ L+ +P G
Sbjct: 90 GDDEERVVLVGHSQGGFSVALAAERFPERVAAVVFLTAAMPPVG 133
>01_06_0962 + 33402971-33403345,33403633-33403767,33408316-33408597
Length = 263
Score = 31.5 bits (68), Expect = 0.73
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 335 PADKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLSCWLPRH 457
P +KV+L G S GG +P+++A + L ++P H
Sbjct: 75 PGEKVVLVGHSLGGINVALAAELFPDKIAAAVFLCAFMPDH 115
>05_04_0076 - 17697893-17697922,17698312-17698707
Length = 141
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 341 DKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLSCWLPRHG 460
++V+L G S GG +PERLA V+ L+ +P G
Sbjct: 84 ERVVLVGHSHGGFSVALAAEWFPERLAAVVFLTASMPPVG 123
>01_05_0331 - 21057957-21058205,21059213-21059791
Length = 275
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 308 IADEVKAGVPADKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLSCWLP 451
+ D V+A ++ +L G S GG T+P+++A + ++ +LP
Sbjct: 70 LLDAVRALPDGERAVLVGHSFGGMSVALAAETFPDKVAAAVFVAAFLP 117
>12_02_0361 - 17979979-17979982,17980093-17981045
Length = 318
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2
Query: 242 AGRYTPEDEEGIERATDLVHGLIADEVKAG 331
A RY E+EE +E VHGLIA E+ AG
Sbjct: 232 ASRYW-EEEEKLEAEIAKVHGLIAAEMAAG 260
>10_08_0047 +
14430437-14430463,14430615-14430714,14431076-14431153,
14431340-14431427,14431536-14431640,14431998-14432540,
14433023-14433157,14433256-14433364,14433578-14433726,
14433800-14434046
Length = 526
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -2
Query: 299 GRDQWLSQYLLHLQECSVQRS*IKPRGHTETVVERHGHSRSRRTYNFDMRASDAS 135
G D+W S + C+V++S TE R H RSRR+ D+ A++A+
Sbjct: 46 GEDEWRSSSFSRRESCTVKKS------RTER-ASRRSHERSRRS-KIDLDAAEAT 92
>02_01_0144 - 1038547-1039650
Length = 367
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = -1
Query: 483 AFKPPGK*PCRGSQQDRDMTPANLSGYVSAAYRANAPP*EKPPSRTLSAGTPALTSSA 310
A +PP P R S TPA S + A A PP EK P +T S A+ ++A
Sbjct: 26 ASQPPA--PPRPSNPRHRKTPAKASKTPAPATAAAPPPVEKRPIKTASDLAAAIRAAA 81
>10_08_0485 +
18235597-18236256,18236353-18236400,18236522-18236644,
18237062-18237211,18237702-18237873,18237965-18238025,
18238129-18238237
Length = 440
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = -2
Query: 716 IFSSNKWYIYFDAGRVFSINSCMS--LSSAMDELCASPWY--VENLTFF-INVLRHDAVI 552
I+ S +W+++ A + ++ + M +S D + A+ W+ + L I+VL HD +
Sbjct: 290 IWGSGEWWMFLSA-QSMAVGTIMVRWVSKYSDPIMATGWHMIIGGLPLLVISVLNHDPAL 348
Query: 551 CPHLKDTT 528
HL++ T
Sbjct: 349 NGHLQELT 356
>08_01_0074 + 530207-532603
Length = 798
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 263 DEEGIERATDLVHGLIADEVKAGVPADKV 349
DE ++A L+H ++AD+ + G P D V
Sbjct: 179 DENRSQQALHLLHTMMADDTRGGCPPDVV 207
>06_01_0495 - 3546131-3547588
Length = 485
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 421 RSHVPILLATSTWLFPWRLKGSC*FTNIPTHG 516
R H P +L + W P + +G+ F + P HG
Sbjct: 89 RHHPPSMLVLADWCVPEQWRGTIDFFSYPGHG 120
>02_01_0636 + 4768852-4769775,4770638-4771021
Length = 435
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +3
Query: 3 IDFPVINWRMEPNPVIIAAQARHTASLIFLHGLGDTGHGWASTI 134
+D P+++ R+ PV++A+ A + H + W+STI
Sbjct: 71 LDAPLMSLRLGEVPVVVASSADAAREITKTHDVAFATRPWSSTI 114
>01_07_0275 + 42434082-42435152
Length = 356
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 153 HVKVICPTASTMPVTLNNGFRMPSWFD 233
H+KV CP +T T+N+ R P+ FD
Sbjct: 235 HLKVTCPVLNTNDTTVND-IRTPNTFD 260
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,197,064
Number of Sequences: 37544
Number of extensions: 478075
Number of successful extensions: 1357
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1353
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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