Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30494
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75712-3|CAB00042.2| 223|Caenorhabditis elegans Hypothetical pr... 86 3e-17
AY691524-1|AAU01163.1| 213|Caenorhabditis elegans acyl protein ... 86 3e-17
AY691523-1|AAU01162.1| 213|Caenorhabditis elegans acyl protein ... 86 3e-17
U28742-3|AAA68333.3| 837|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z54342-13|CAH60747.1| 123|Caenorhabditis elegans Hypothetical p... 30 1.5
Z54342-12|CAA91145.2| 758|Caenorhabditis elegans Hypothetical p... 30 1.5
DQ407523-1|ABD85015.1| 856|Caenorhabditis elegans OGA-1c protein. 30 1.5
DQ407522-1|ABD85014.1| 854|Caenorhabditis elegans OGA-1b protein. 30 1.5
DQ407521-1|ABD85013.1| 870|Caenorhabditis elegans OGA-1d protein. 30 1.5
AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical... 30 1.5
U53340-7|AAA96211.2| 1383|Caenorhabditis elegans Npc1 (human nie... 28 6.0
AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 28 6.0
AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 28 6.0
AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical ... 28 6.0
AC006743-2|AAM97971.1| 474|Caenorhabditis elegans Synapsin prot... 28 8.0
>Z75712-3|CAB00042.2| 223|Caenorhabditis elegans Hypothetical
protein K04G2.5 protein.
Length = 223
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +3
Query: 39 NPVIIAAQARHTASLIFLHGLGDTGHGWASTI-AGIRGPHVKVICPTASTMPVTLNNGFR 215
NP I++ + H +LIFLHGLGD GHGWA + ++K ICP +S PVTLN G R
Sbjct: 8 NPSIVSPRGEHKGTLIFLHGLGDQGHGWADAFKTEAKHDNIKFICPHSSERPVTLNMGMR 67
Query: 216 MPSWFDLRTLD 248
MP+WFDL LD
Sbjct: 68 MPAWFDLFGLD 78
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/82 (46%), Positives = 49/82 (59%)
Frame = +2
Query: 260 EDEEGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLS 439
EDE+GI RAT VH LI EV AG+PA ++ +GGFS GG TYP++L G++ LS
Sbjct: 83 EDEQGINRATQYVHQLIDAEVAAGIPASRIAVGGFSMGGALAIYAGLTYPQKLGGIVGLS 142
Query: 440 CWLPRHGYFPGGLKAPVDLPIF 505
+ + FPG A PIF
Sbjct: 143 SFFLQRTKFPGSFTANNATPIF 164
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +1
Query: 511 HGDKDPVVSFKWGQMTASCLKTFMKNVKFSTYQGLAHSSSIAELKDMQEFI 663
HG D +V ++GQM+ +K F V+ TY+G+ HSS E++D++ F+
Sbjct: 167 HGTDDFLVPLQFGQMSEQYIKKFNPKVELHTYRGMQHSSCGEEMRDVKTFL 217
>AY691524-1|AAU01163.1| 213|Caenorhabditis elegans acyl protein
thioesterase 1 protein.
Length = 213
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +3
Query: 39 NPVIIAAQARHTASLIFLHGLGDTGHGWASTI-AGIRGPHVKVICPTASTMPVTLNNGFR 215
NP I++ + H +LIFLHGLGD GHGWA + ++K ICP +S PVTLN G R
Sbjct: 8 NPSIVSPRGEHKGTLIFLHGLGDQGHGWADAFKTEAKHDNIKFICPHSSERPVTLNMGMR 67
Query: 216 MPSWFDLRTLD 248
MP+WFDL LD
Sbjct: 68 MPAWFDLFGLD 78
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/82 (46%), Positives = 48/82 (58%)
Frame = +2
Query: 260 EDEEGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLS 439
EDE+GI RAT VH LI EV AG+PA ++ +GGFS GG TYP++L G++ LS
Sbjct: 83 EDEQGINRATQYVHQLIDAEVAAGIPASRIAVGGFSMGGALAIYAGLTYPQKLGGIVGLS 142
Query: 440 CWLPRHGYFPGGLKAPVDLPIF 505
+ FPG A PIF
Sbjct: 143 SXFLQRTKFPGSFTANNATPIF 164
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 511 HGDKDPVVSFKWGQMTASCLKTFMKNVKFSTYQGLAHSSSIAELKDM 651
HG D +V ++GQM+ +K F V+ TY+G+ HSS E++D+
Sbjct: 167 HGTDDFLVPLQFGQMSEQYIKKFNPKVELHTYRGMQHSSCGEEMRDV 213
>AY691523-1|AAU01162.1| 213|Caenorhabditis elegans acyl protein
thioesterase 1 protein.
Length = 213
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +3
Query: 39 NPVIIAAQARHTASLIFLHGLGDTGHGWASTI-AGIRGPHVKVICPTASTMPVTLNNGFR 215
NP I++ + H +LIFLHGLGD GHGWA + ++K ICP +S PVTLN G R
Sbjct: 8 NPSIVSPRGEHKGTLIFLHGLGDQGHGWADAFKTEAKHDNIKFICPHSSERPVTLNMGMR 67
Query: 216 MPSWFDLRTLD 248
MP+WFDL LD
Sbjct: 68 MPAWFDLFGLD 78
Score = 79.0 bits (186), Expect = 3e-15
Identities = 38/82 (46%), Positives = 48/82 (58%)
Frame = +2
Query: 260 EDEEGIERATDLVHGLIADEVKAGVPADKVLLGGFSQGGXXXXXXXXTYPERLAGVMSLS 439
EDE+GI RAT VH LI EV AG+PA ++ +GGFS GG TYP++L G++ LS
Sbjct: 83 EDEQGINRATQYVHQLIDAEVAAGIPASRIAVGGFSMGGALAIYAGLTYPQKLGGIVGLS 142
Query: 440 CWLPRHGYFPGGLKAPVDLPIF 505
+ FPG A PIF
Sbjct: 143 SXFLQRTKFPGSFTANNATPIF 164
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 511 HGDKDPVVSFKWGQMTASCLKTFMKNVKFSTYQGLAHSSSIAELKDM 651
HG D +V ++GQM+ +K F V+ TY+G+ HSS E++D+
Sbjct: 167 HGTDDFLVPLQFGQMSEQYIKKFNPKVELHTYRGMQHSSCGEEMRDV 213
>U28742-3|AAA68333.3| 837|Caenorhabditis elegans Hypothetical
protein T20B5.3 protein.
Length = 837
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 117 GWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSWF-DLRTLD 248
G A+T IR + ++C T + NG R+ S F D RTLD
Sbjct: 448 GLATTAEEIRNQRLSLLCATCEMYYLPFENGPRVQSMFKDFRTLD 492
>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical protein
W05B2.4 protein.
Length = 2265
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 613 LAHSSSIAELKDMQEFIEKTLPASK*MYHLLLEKIIIHSVV 735
L H + I+E ++ +E +EK + AS M+ L+ ++ H VV
Sbjct: 1917 LKHIAQISEEEEEEEGVEKRMTASLDMFDLIYSEVDAHDVV 1957
>Z54342-13|CAH60747.1| 123|Caenorhabditis elegans Hypothetical
protein C08H9.3b protein.
Length = 123
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 80 AYIFTRFG*HRSWMGKHDCWHQRPSCQSYMSYGFDYARDAQQRFPY 217
AY+ T F HR+WM W QRP C+ Y ++ D F Y
Sbjct: 24 AYVSTDFEVHRNWMAV--TW-QRPLCEWYTEATSEWTLDYPPFFAY 66
>Z54342-12|CAA91145.2| 758|Caenorhabditis elegans Hypothetical
protein C08H9.3a protein.
Length = 758
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 80 AYIFTRFG*HRSWMGKHDCWHQRPSCQSYMSYGFDYARDAQQRFPY 217
AY+ T F HR+WM W QRP C+ Y ++ D F Y
Sbjct: 24 AYVSTDFEVHRNWMAV--TW-QRPLCEWYTEATSEWTLDYPPFFAY 66
>DQ407523-1|ABD85015.1| 856|Caenorhabditis elegans OGA-1c protein.
Length = 856
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 117 GWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSWF-DLRTLDATLLKMKKVLRE 284
G A+T IR + ++C T + NG R+ S F D R L MKK +E
Sbjct: 448 GLATTAEEIRNQRLSLLCATCEMYYLPFENGPRVQSMFKDFRWLMQNASVMKKSFKE 504
>DQ407522-1|ABD85014.1| 854|Caenorhabditis elegans OGA-1b protein.
Length = 854
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 117 GWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSWF-DLRTLDATLLKMKKVLRE 284
G A+T IR + ++C T + NG R+ S F D R L MKK +E
Sbjct: 448 GLATTAEEIRNQRLSLLCATCEMYYLPFENGPRVQSMFKDFRWLMQNASVMKKSFKE 504
>DQ407521-1|ABD85013.1| 870|Caenorhabditis elegans OGA-1d protein.
Length = 870
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 117 GWASTIAGIRGPHVKVICPTASTMPVTLNNGFRMPSWF-DLRTLDATLLKMKKVLRE 284
G A+T IR + ++C T + NG R+ S F D R L MKK +E
Sbjct: 464 GLATTAEEIRNQRLSLLCATCEMYYLPFENGPRVQSMFKDFRWLMQNASVMKKSFKE 520
>AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical
protein Y113G7B.15 protein.
Length = 328
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = -2
Query: 380 MLHLERNHQAELYLQAHRL*LHQQSTHGRDQWLSQYLLHLQECSVQRS*IKPRGHTETVV 201
+ H +NHQ L A + T G +++ + + QE S + S I P+ HT+ +
Sbjct: 17 LAHFAKNHQKIQELNAKARREGRNVTFGWNKFADK---NRQELSARNSKIHPKNHTDLPI 73
Query: 200 ERHGHSRSRRTYN 162
+ H R R ++
Sbjct: 74 YKPRHPRGSRNHH 86
>U53340-7|AAA96211.2| 1383|Caenorhabditis elegans Npc1 (human
niemann pick c disease)related protein 1 protein.
Length = 1383
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = -2
Query: 662 INSCMSLSSAMDELCASPWYVENLTFFINVLRHDAVICPHLKDTTGSLSP*VGILVNQQE 483
+ C L + ++LC +P E LT I RH CP D L NQQ+
Sbjct: 62 VEFCPHLLTGDNKLCCTPSQAEGLTKQIAQARHILGRCPSCFDNFAKLWCEFTCSPNQQD 121
Query: 482 PLSLQGNNHVE 450
+S+ +E
Sbjct: 122 FVSISEMKPIE 132
>AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical
protein Y37A1B.2d protein.
Length = 564
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -1
Query: 405 YVSAAYRANAPP*EKPPSRTLSAGTPALTSSAINPWTRSVALSIPSS 265
YV+ + PP PP S+G PA +S + W + ++ P S
Sbjct: 55 YVTPYQASRPPPVLPPPLPPTSSGPPAASSRPFDDWGGASEVAAPPS 101
>AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical
protein Y37A1B.2c protein.
Length = 566
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -1
Query: 405 YVSAAYRANAPP*EKPPSRTLSAGTPALTSSAINPWTRSVALSIPSS 265
YV+ + PP PP S+G PA +S + W + ++ P S
Sbjct: 55 YVTPYQASRPPPVLPPPLPPTSSGPPAASSRPFDDWGGASEVAAPPS 101
>AL023835-1|CAA19486.1| 164|Caenorhabditis elegans Hypothetical
protein Y37A1B.2a protein.
Length = 164
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -1
Query: 405 YVSAAYRANAPP*EKPPSRTLSAGTPALTSSAINPWTRSVALSIPSS 265
YV+ + PP PP S+G PA +S + W + ++ P S
Sbjct: 55 YVTPYQASRPPPVLPPPLPPTSSGPPAASSRPFDDWGGASEVAAPPS 101
>AC006743-2|AAM97971.1| 474|Caenorhabditis elegans Synapsin protein
1, isoform b protein.
Length = 474
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 349 NFICRHTGFNFISNQPMDEISGSLNTFFIFRSVASSV 239
NF R F+ +PMD+++ + F F+S+A+ V
Sbjct: 2 NFFKRKFSFSEDEGEPMDDVNSGPPSSFSFQSIANKV 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,930,639
Number of Sequences: 27780
Number of extensions: 404151
Number of successful extensions: 1034
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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