Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30492
         (833 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69907-1|CAA49532.1|  136|Homo sapiens P1 gene for c subunit of ...    42   0.003
D13118-1|BAA02420.1|  136|Homo sapiens ATP synthase subunit c pr...    42   0.003
CR533449-1|CAG38480.1|  136|Homo sapiens ATP5G1 protein.               42   0.003
BT007230-1|AAP35894.1|  136|Homo sapiens ATP synthase, H+ transp...    42   0.003
BC004963-1|AAH04963.1|  136|Homo sapiens ATP synthase, H+ transp...    42   0.003
X69908-1|CAA49533.1|  141|Homo sapiens protein ( H.sapiens gene ...    40   0.011
D13119-1|BAA02421.1|  141|Homo sapiens ATP synthase subunit c pr...    40   0.011
BC020826-1|AAH20826.1|  141|Homo sapiens ATP5G2 protein protein.       40   0.011
M16453-1|AAA51806.1|  100|Homo sapiens ATP5A protein.                  39   0.019
U09813-1|AAA78807.1|  142|Homo sapiens mitochondrial ATP synthas...    38   0.045
CR407601-1|CAG28411.1|  142|Homo sapiens ATP5G3 protein.               38   0.045
BC106881-1|AAI06882.1|  142|Homo sapiens ATP synthase, H+ transp...    38   0.045
AC096649-1|AAX88970.1|  142|Homo sapiens unknown protein.              38   0.045
DQ012014-1|AAY59750.1|   62|Homo sapiens beta-defensin 110 protein.    33   0.96 
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio...    30   9.0  
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ...    30   9.0  
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio...    30   9.0  

>X69907-1|CAA49532.1|  136|Homo sapiens P1 gene for c subunit of
           human mitochondrial ATP protein.
          Length = 136

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
 Frame = +3

Query: 678 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAGGPFQTTSVTKDIDSAAKFIGAGA 833
           C   L+RP++A     P ++   P+    P Q+ A   FQT+ V++DID+AAKFIGAGA
Sbjct: 17  CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGA 74


>D13118-1|BAA02420.1|  136|Homo sapiens ATP synthase subunit c
           precursor protein.
          Length = 136

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
 Frame = +3

Query: 678 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAGGPFQTTSVTKDIDSAAKFIGAGA 833
           C   L+RP++A     P ++   P+    P Q+ A   FQT+ V++DID+AAKFIGAGA
Sbjct: 17  CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGA 74


>CR533449-1|CAG38480.1|  136|Homo sapiens ATP5G1 protein.
          Length = 136

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
 Frame = +3

Query: 678 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAGGPFQTTSVTKDIDSAAKFIGAGA 833
           C   L+RP++A     P ++   P+    P Q+ A   FQT+ V++DID+AAKFIGAGA
Sbjct: 17  CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGA 74


>BT007230-1|AAP35894.1|  136|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit c
           (subunit 9), protein.
          Length = 136

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
 Frame = +3

Query: 678 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAGGPFQTTSVTKDIDSAAKFIGAGA 833
           C   L+RP++A     P ++   P+    P Q+ A   FQT+ V++DID+AAKFIGAGA
Sbjct: 17  CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGA 74


>BC004963-1|AAH04963.1|  136|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit C1
           (subunit 9) protein.
          Length = 136

 Score = 41.9 bits (94), Expect = 0.003
 Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
 Frame = +3

Query: 678 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAGGPFQTTSVTKDIDSAAKFIGAGA 833
           C   L+RP++A     P ++   P+    P Q+ A   FQT+ V++DID+AAKFIGAGA
Sbjct: 17  CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGA 74


>X69908-1|CAA49533.1|  141|Homo sapiens protein ( H.sapiens gene for
           mitochondrial ATP synthase c subunit (P2 form). ).
          Length = 141

 Score = 39.9 bits (89), Expect = 0.011
 Identities = 17/29 (58%), Positives = 24/29 (82%)
 Frame = +3

Query: 747 TQLSAGGPFQTTSVTKDIDSAAKFIGAGA 833
           T L +   FQT+++++DID+AAKFIGAGA
Sbjct: 51  TSLVSSRSFQTSAISRDIDTAAKFIGAGA 79


>D13119-1|BAA02421.1|  141|Homo sapiens ATP synthase subunit c
           precursor protein.
          Length = 141

 Score = 39.9 bits (89), Expect = 0.011
 Identities = 17/29 (58%), Positives = 24/29 (82%)
 Frame = +3

Query: 747 TQLSAGGPFQTTSVTKDIDSAAKFIGAGA 833
           T L +   FQT+++++DID+AAKFIGAGA
Sbjct: 51  TSLVSSRSFQTSAISRDIDTAAKFIGAGA 79


>BC020826-1|AAH20826.1|  141|Homo sapiens ATP5G2 protein protein.
          Length = 141

 Score = 39.9 bits (89), Expect = 0.011
 Identities = 17/29 (58%), Positives = 24/29 (82%)
 Frame = +3

Query: 747 TQLSAGGPFQTTSVTKDIDSAAKFIGAGA 833
           T L +   FQT+++++DID+AAKFIGAGA
Sbjct: 51  TSLVSSRSFQTSAISRDIDTAAKFIGAGA 79


>M16453-1|AAA51806.1|  100|Homo sapiens ATP5A protein.
          Length = 100

 Score = 39.1 bits (87), Expect = 0.019
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = +3

Query: 744 PTQLSAGGPFQTTSVTKDIDSAAKFIGAGA 833
           P Q++  G FQT+ V++DID+AAKFIGAGA
Sbjct: 10  PLQVARRG-FQTSVVSRDIDTAAKFIGAGA 38


>U09813-1|AAA78807.1|  142|Homo sapiens mitochondrial ATP synthase
           subunit 9 precursor protein.
          Length = 142

 Score = 37.9 bits (84), Expect = 0.045
 Identities = 15/21 (71%), Positives = 21/21 (100%)
 Frame = +3

Query: 771 FQTTSVTKDIDSAAKFIGAGA 833
           FQT+++++DID+AAKFIGAGA
Sbjct: 60  FQTSAISRDIDTAAKFIGAGA 80


>CR407601-1|CAG28411.1|  142|Homo sapiens ATP5G3 protein.
          Length = 142

 Score = 37.9 bits (84), Expect = 0.045
 Identities = 15/21 (71%), Positives = 21/21 (100%)
 Frame = +3

Query: 771 FQTTSVTKDIDSAAKFIGAGA 833
           FQT+++++DID+AAKFIGAGA
Sbjct: 60  FQTSAISRDIDTAAKFIGAGA 80


>BC106881-1|AAI06882.1|  142|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit C3
           (subunit 9) protein.
          Length = 142

 Score = 37.9 bits (84), Expect = 0.045
 Identities = 15/21 (71%), Positives = 21/21 (100%)
 Frame = +3

Query: 771 FQTTSVTKDIDSAAKFIGAGA 833
           FQT+++++DID+AAKFIGAGA
Sbjct: 60  FQTSAISRDIDTAAKFIGAGA 80


>AC096649-1|AAX88970.1|  142|Homo sapiens unknown protein.
          Length = 142

 Score = 37.9 bits (84), Expect = 0.045
 Identities = 15/21 (71%), Positives = 21/21 (100%)
 Frame = +3

Query: 771 FQTTSVTKDIDSAAKFIGAGA 833
           FQT+++++DID+AAKFIGAGA
Sbjct: 60  FQTSAISRDIDTAAKFIGAGA 80


>DQ012014-1|AAY59750.1|   62|Homo sapiens beta-defensin 110 protein.
          Length = 62

 Score = 33.5 bits (73), Expect = 0.96
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = -1

Query: 788 DRCGLERTACRELCRDSRYHLCMGGYCCKWSHQCRV 681
           +RC   R  C+  C D  Y     GYC KW  QC V
Sbjct: 30  ERCEKVRGICKTFCDDVEYDY---GYCIKWRSQCCV 62


>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
           regulator 1 protein.
          Length = 1077

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 705 AAVPTHTQMVPAVPTQLSAGGPFQTTSVTKDIDSAAKFI 821
           A+ PT +   PAV T  S+  P  TTS T    S A+ +
Sbjct: 258 ASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTV 296


>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
           factor CA150 protein.
          Length = 1098

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 705 AAVPTHTQMVPAVPTQLSAGGPFQTTSVTKDIDSAAKFI 821
           A+ PT +   PAV T  S+  P  TTS T    S A+ +
Sbjct: 258 ASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTV 296


>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
           regulator 1 variant protein.
          Length = 1081

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 705 AAVPTHTQMVPAVPTQLSAGGPFQTTSVTKDIDSAAKFI 821
           A+ PT +   PAV T  S+  P  TTS T    S A+ +
Sbjct: 262 ASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTV 300


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,518,328
Number of Sequences: 237096
Number of extensions: 2574251
Number of successful extensions: 7403
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7400
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)