Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30492
(833 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-26|CAC48128.1| 922|Caenorhabditis elegans Hypothetical... 34 0.14
AL132876-25|CAH04764.1| 930|Caenorhabditis elegans Hypothetical... 34 0.14
AL132876-9|CAD21661.1| 959|Caenorhabditis elegans Hypothetical ... 34 0.14
D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase su... 33 0.25
D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase su... 33 0.25
AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical... 33 0.25
U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF139520-1|AAD33830.1| 176|Caenorhabditis elegans warthog prote... 29 3.1
AF000298-2|AAC48258.1| 176|Caenorhabditis elegans Warthog (hedg... 29 3.1
Z66520-11|CAA91383.1| 269|Caenorhabditis elegans Hypothetical p... 29 5.4
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 29 5.4
U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical p... 28 7.2
Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical p... 28 7.2
Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 28 9.5
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 28 9.5
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 28 9.5
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 28 9.5
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 28 9.5
>AL132876-26|CAC48128.1| 922|Caenorhabditis elegans Hypothetical
protein Y105E8A.10c protein.
Length = 922
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Frame = -3
Query: 654 GRSVWRQTAFCF---YKVRRATTKNTEKEQERTKTIKNEIDHRCSSRPCGYRIAAPPTED 484
G W + A C ++ K T QE+ + + H SS PC Y +A E
Sbjct: 252 GNRRWEREAECSGVKFETEEEGLKPTTTAQEKISGVS--LYHTISSMPCTYGLATTHREH 309
Query: 483 YPKIVRSEFDASPDGAYNYNFETSNGIVRS 394
V FD S +GA +N G V S
Sbjct: 310 TTTTVCERFDPSRNGAALWNHLKQTGDVPS 339
>AL132876-25|CAH04764.1| 930|Caenorhabditis elegans Hypothetical
protein Y105E8A.10b protein.
Length = 930
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Frame = -3
Query: 654 GRSVWRQTAFCF---YKVRRATTKNTEKEQERTKTIKNEIDHRCSSRPCGYRIAAPPTED 484
G W + A C ++ K T QE+ + + H SS PC Y +A E
Sbjct: 260 GNRRWEREAECSGVKFETEEEGLKPTTTAQEKISGVS--LYHTISSMPCTYGLATTHREH 317
Query: 483 YPKIVRSEFDASPDGAYNYNFETSNGIVRS 394
V FD S +GA +N G V S
Sbjct: 318 TTTTVCERFDPSRNGAALWNHLKQTGDVPS 347
>AL132876-9|CAD21661.1| 959|Caenorhabditis elegans Hypothetical
protein Y105E8A.10a protein.
Length = 959
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Frame = -3
Query: 654 GRSVWRQTAFCF---YKVRRATTKNTEKEQERTKTIKNEIDHRCSSRPCGYRIAAPPTED 484
G W + A C ++ K T QE+ + + H SS PC Y +A E
Sbjct: 289 GNRRWEREAECSGVKFETEEEGLKPTTTAQEKISGVS--LYHTISSMPCTYGLATTHREH 346
Query: 483 YPKIVRSEFDASPDGAYNYNFETSNGIVRS 394
V FD S +GA +N G V S
Sbjct: 347 TTTTVCERFDPSRNGAALWNHLKQTGDVPS 376
>D86741-2|BAA21841.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3
Query: 777 TTSVTKDIDSAAKFIGAGA 833
TT KDIDSAAK+IGAGA
Sbjct: 12 TTVARKDIDSAAKYIGAGA 30
>D86740-2|BAA13165.1| 92|Caenorhabditis elegans ATP synthase
subunit protein.
Length = 92
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3
Query: 777 TTSVTKDIDSAAKFIGAGA 833
TT KDIDSAAK+IGAGA
Sbjct: 12 TTVARKDIDSAAKYIGAGA 30
>AC090999-18|AAK26152.1| 116|Caenorhabditis elegans Hypothetical
protein Y82E9BR.3 protein.
Length = 116
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3
Query: 777 TTSVTKDIDSAAKFIGAGA 833
TT KDIDSAAK+IGAGA
Sbjct: 36 TTVARKDIDSAAKYIGAGA 54
>U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical
protein C49C8.5 protein.
Length = 451
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 500 PPLQRTTLRSFGLNSTPAPMELTTTISRLPT 408
PP + TT G TP P E TT ++LP+
Sbjct: 162 PPSETTTTEITGTTPTPGPTEPPTTTAKLPS 192
>AF139520-1|AAD33830.1| 176|Caenorhabditis elegans warthog protein
WRT-5 protein.
Length = 176
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 375 PSAHQFRYARCRWKSRNCSCKLHRGWRRIQTERS*GS 485
PS H+ +YA C ++ + +C + W T+ S GS
Sbjct: 48 PSCHEKKYAECPERATSTTCSTNSSWVGGVTQHSDGS 84
>AF000298-2|AAC48258.1| 176|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 5, isoform a protein.
Length = 176
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 375 PSAHQFRYARCRWKSRNCSCKLHRGWRRIQTERS*GS 485
PS H+ +YA C ++ + +C + W T+ S GS
Sbjct: 48 PSCHEKKYAECPERATSTTCSTNSSWVGGVTQHSDGS 84
>Z66520-11|CAA91383.1| 269|Caenorhabditis elegans Hypothetical
protein F49E12.9a protein.
Length = 269
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 184 KSIQGI*KFSSWRRRPEE*IHPEQ 255
KSI+G + SW +P + IHPEQ
Sbjct: 242 KSIEGKRNYMSWSMKPIKQIHPEQ 265
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +2
Query: 626 NAVCRQTDRPCSQVCHLLQLCTGATTCSSTHPYTDGTCCPYT 751
N C P + C+ T C+S + +G CCP T
Sbjct: 106 NTQCGSNSSPQVSASGQVVTCSTNTQCASGYTCNNGACCPNT 147
>U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical
protein D1044.7 protein.
Length = 400
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 731 HLCMGGYCCKWSHQCRVAEDGRPGCRGDQSGGRQHFVFIRCGARQQRT 588
++C G CC ++ + G P G S G Q F + G R QR+
Sbjct: 103 YICSNGACCPNTNSNTCSTTGTPCFTGQISVGGQCFNSVNIGDRCQRS 150
>Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -2
Query: 778 VW--KGPPAESCVGTAGTICVWVGTAASG-RTSAELQK 674
VW P CVG GT+C + +G +TS +LQK
Sbjct: 364 VWLTASPLLAECVGVLGTVCDVIQLGVTGSKTSPDLQK 401
>Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -2
Query: 778 VW--KGPPAESCVGTAGTICVWVGTAASG-RTSAELQK 674
VW P CVG GT+C + +G +TS +LQK
Sbjct: 405 VWLTASPLLAECVGVLGTVCDVIQLGVTGSKTSPDLQK 442
>Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -2
Query: 778 VW--KGPPAESCVGTAGTICVWVGTAASG-RTSAELQK 674
VW P CVG GT+C + +G +TS +LQK
Sbjct: 364 VWLTASPLLAECVGVLGTVCDVIQLGVTGSKTSPDLQK 401
>Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -2
Query: 778 VW--KGPPAESCVGTAGTICVWVGTAASG-RTSAELQK 674
VW P CVG GT+C + +G +TS +LQK
Sbjct: 405 VWLTASPLLAECVGVLGTVCDVIQLGVTGSKTSPDLQK 442
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 683 LCTGATTCSSTHPYTDGTCCPYTALCRRSF 772
LC TTC D CP ALC +F
Sbjct: 575 LCANGTTCREDRVKCDKRPCPIRALCLPNF 604
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical protein
T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -3
Query: 642 WRQTAFCFYKVRRATTKNTEKEQERTKTIKNEIDHRCSSRPCGYRIAAPPTEDYPKIVRS 463
W +T + + TT + ++E KTI E+D + C + P E+ K +
Sbjct: 858 WGETETPLSEGEKTTTSSPKEEAATLKTIGQEVDDDSLLKGCIVHFQSQPIEERNKEFTA 917
Query: 462 EFD 454
F+
Sbjct: 918 PFE 920
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -3
Query: 642 WRQTAFCFYKVRRATTKNTEKEQERTKTIKNEIDHRCSSRPCGYRIAAPPTEDYPKIVRS 463
W +T + + TT + ++E KTI E+D + C + P E+ K +
Sbjct: 858 WGETETPLSEGEKTTTSSPKEEAATLKTIGQEVDDDSLLKGCIVHFQSQPIEERNKEFTA 917
Query: 462 EFD 454
F+
Sbjct: 918 PFE 920
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 779 GLERTACRELCRDSRYHLCMGGYCCKWSHQCRVAEDGRPGCRGDQS 642
G E T C+ ++ LC G CC WS C + + C G QS
Sbjct: 683 GQEATTCQGPSIETT--LCEGQSCCNWSEWCHWSMCDKE-CGGGQS 725
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -3
Query: 642 WRQTAFCFYKVRRATTKNTEKEQERTKTIKNEIDHRCSSRPCGYRIAAPPTEDYPKIVRS 463
W +T + + TT + ++E KTI E+D + C + P E+ K +
Sbjct: 858 WGETETPLSEGEKTTTSSPKEEAATLKTIGQEVDDDSLLKGCIVHFQSQPIEERNKEFTA 917
Query: 462 EFD 454
F+
Sbjct: 918 PFE 920
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical protein
T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -3
Query: 642 WRQTAFCFYKVRRATTKNTEKEQERTKTIKNEIDHRCSSRPCGYRIAAPPTEDYPKIVRS 463
W +T + + TT + ++E KTI E+D + C + P E+ K +
Sbjct: 858 WGETETPLSEGEKTTTSSPKEEAATLKTIGQEVDDDSLLKGCIVHFQSQPIEERNKEFTA 917
Query: 462 EFD 454
F+
Sbjct: 918 PFE 920
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -3
Query: 642 WRQTAFCFYKVRRATTKNTEKEQERTKTIKNEIDHRCSSRPCGYRIAAPPTEDYPKIVRS 463
W +T + + TT + ++E KTI E+D + C + P E+ K +
Sbjct: 858 WGETETPLSEGEKTTTSSPKEEAATLKTIGQEVDDDSLLKGCIVHFQSQPIEERNKEFTA 917
Query: 462 EFD 454
F+
Sbjct: 918 PFE 920
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -3
Query: 642 WRQTAFCFYKVRRATTKNTEKEQERTKTIKNEIDHRCSSRPCGYRIAAPPTEDYPKIVRS 463
W +T + + TT + ++E KTI E+D + C + P E+ K +
Sbjct: 858 WGETETPLSEGEKTTTSSPKEEAATLKTIGQEVDDDSLLKGCIVHFQSQPIEERNKEFTA 917
Query: 462 EFD 454
F+
Sbjct: 918 PFE 920
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,883,047
Number of Sequences: 27780
Number of extensions: 400420
Number of successful extensions: 1404
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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