Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30492
(833 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 60 2e-11
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 1.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 2.0
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 4.6
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 23 4.6
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 4.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.0
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 8.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 8.0
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 60.5 bits (140), Expect = 2e-11
Identities = 35/95 (36%), Positives = 55/95 (57%)
Frame = -3
Query: 474 IVRSEFDASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVAVRGSYSYTNTDGK 295
I + + + DG Y NFETSNGI E+G+ K+ DN+ V+ +GS SYT DG+
Sbjct: 29 ITSQQLEVNFDGNYINNFETSNGISHQESGQPKQV---DNETPVVS--QGSDSYTAPDGQ 83
Query: 294 PETITYFADETGYLLRVNLFLRSPPPRAKLLNSLD 190
+ITY ADE G+ ++ + +PP ++ +L+
Sbjct: 84 QVSITYVADENGFQVQGSHIPTAPPIPPEIQRALE 118
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 24.2 bits (50), Expect = 1.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 642 WRQTAFCFYKVRRATTKN 589
W Q FC+++ AT KN
Sbjct: 533 WFQNTFCYFRRNAATWKN 550
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.8 bits (49), Expect = 2.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 417 TSNGIVRSETGELKEAL 367
TS G R TGE+KEA+
Sbjct: 403 TSKGEYRMSTGEMKEAI 419
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.6 bits (46), Expect = 4.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 349 RLVVVVESLLQLTSFATHDAVGSLEIVVVSSIGAGV 456
RL + +L FA+H+ VGS + V + AG+
Sbjct: 460 RLKAIRATLKASPFFASHEVVGSSLLFVHDTKNAGI 495
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 22.6 bits (46), Expect = 4.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 349 RLVVVVESLLQLTSFATHDAVGSLEIVVVSSIGAGV 456
RL + +L FA+H+ VGS + V + AG+
Sbjct: 375 RLKAIRATLKASPFFASHEVVGSSLLFVHDTKNAGI 410
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.6 bits (46), Expect = 4.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 349 RLVVVVESLLQLTSFATHDAVGSLEIVVVSSIGAGV 456
RL + +L FA+H+ VGS + V + AG+
Sbjct: 694 RLKAIRATLKASPFFASHEVVGSSLLFVHDTKNAGI 729
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 589 VLCCRAPHLI 618
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 589 VLCCRAPHLI 618
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 589 VLCCRAPHLI 618
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 589 VLCCRAPHLI 618
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 589 VLCCRAPHLI 618
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 589 VLCCRAPHLI 618
V+ CRAPH+I
Sbjct: 450 VILCRAPHII 459
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 8.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 589 VLCCRAPHLI 618
V+ CRAPH+I
Sbjct: 518 VILCRAPHII 527
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 8.0
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 589 VLCCRAPHLI 618
V+ CRAPH+I
Sbjct: 518 VILCRAPHII 527
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,996
Number of Sequences: 438
Number of extensions: 5030
Number of successful extensions: 21
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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