Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30491
(746 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g37290.1 68418.m04479 armadillo/beta-catenin repeat family pr... 37 0.012
At3g47820.1 68416.m05211 armadillo/beta-catenin repeat family pr... 30 1.4
At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2) sim... 30 1.9
At3g05720.1 68416.m00640 importin alpha-1 subunit, putative simi... 29 2.5
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 29 3.3
At4g31590.1 68417.m04487 glycosyl transferase family 2 protein s... 29 3.3
At4g02150.1 68417.m00287 importin alpha-2 subunit identical to i... 29 3.3
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 3.3
At2g26780.1 68415.m03212 expressed protein contains Pfam profile... 29 4.3
At2g05810.2 68415.m00627 armadillo/beta-catenin repeat family pr... 29 4.3
At2g05810.1 68415.m00626 armadillo/beta-catenin repeat family pr... 29 4.3
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 29 4.3
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 29 4.3
At5g65200.1 68418.m08200 armadillo/beta-catenin repeat family pr... 28 5.7
At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family pr... 28 5.7
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 28 5.7
At3g28180.1 68416.m03521 glycosyl transferase family 2 protein s... 28 5.7
At5g42340.1 68418.m05155 armadillo/beta-catenin repeat family pr... 28 7.6
At3g06720.2 68416.m00797 importin alpha-1 subunit, putative (IMP... 28 7.6
At3g06720.1 68416.m00796 importin alpha-1 subunit, putative (IMP... 28 7.6
At1g27050.1 68414.m03298 homeobox-leucine zipper family protein ... 28 7.6
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 28 7.6
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 28 7.6
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 27 10.0
At1g70300.1 68414.m08088 potassium transporter, putative similar... 27 10.0
At1g28390.1 68414.m03488 protein kinase family protein contains ... 27 10.0
>At5g37290.1 68418.m04479 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 180
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 213 SLAYFSQRKPQQTTIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVE-KEGAEMIEAE 389
+LA F+ T +RQ NV+ +FV + E + G +C E K A ++EA+
Sbjct: 45 NLANFAYDPYNYTILRQLNVLELFVDCITEPNEKLVEFGIGGICNACAEPKNVATIVEAD 104
Query: 390 GQPL 401
G PL
Sbjct: 105 GIPL 108
>At3g47820.1 68416.m05211 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 509
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +3
Query: 213 SLAYFSQRKPQQTTIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKEGAEMIEAEG 392
S+ S KP + I + +P+ + +L + Q G L LAVE+E +I G
Sbjct: 248 SIVNLSLEKPNKLKIVRSGFVPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIGVLG 307
>At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2)
similar to importin alpha 2 [Capsicum annuum]
GI:13752562; contains Pfam profiles PF01749: Importin
beta binding domain, PF00514:
Armadillo/beta-catenin-like repeat; non-consensus GG
donor splice site at exon 1 and 6; CT acceptor splice
site at exon 2
Length = 444
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Frame = +3
Query: 210 WSLAYFSQRKPQQT-TIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKEGA-EMIE 383
W+L + + T + + +PIFVQLL ++ ++++ A L +A + +++
Sbjct: 143 WALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVREQAVWALGNVAGDSPRCRDLVL 202
Query: 384 AEGQ--PLRS-LN--CCIQEMKGSPRTLQPFCSACPK 479
+G PL S LN + ++ + TL FC P+
Sbjct: 203 GQGALIPLLSQLNEHAKLSMLRNATWTLSNFCRGKPQ 239
>At3g05720.1 68416.m00640 importin alpha-1 subunit, putative similar
to importin alpha subunit (Karyopherin alpha subunit)
(KAP alpha) SP:O22478 from [Lycopersicon esculentum]
Length = 528
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +1
Query: 43 SANYAPLREHGAVHHLVRLLMRAYNDTQRQRSSSGGGANTAYADGVRMEEIVEGAVGALH 222
S N + +HGAV LVRLL Y+ + Q + G + D R +IV G
Sbjct: 136 SENTEVVIDHGAVAILVRLLNSPYDVVREQVVWALGNIS---GDSPRCRDIVLGHAALPS 192
Query: 223 ILAKESHNRQLS 258
+L + +H +LS
Sbjct: 193 LLLQLNHGAKLS 204
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 521 VNSIGVSSCNRGACLRTCGTERLQRTW 441
VN + ++ NR C+ TCG ++L + W
Sbjct: 455 VNDLAFANPNRQLCVITCGDDKLIKVW 481
>At4g31590.1 68417.m04487 glycosyl transferase family 2 protein
similar to cellulose synthase from Agrobacterium
tumeficiens [gi:710492] and Agrobacterium radiobacter
[gi:710493]; contains Pfam glycosyl transferase, group 2
family protein domain PF00535
Length = 692
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 259 RIVVCCGFLWLKYARLQRRLPRSP 188
R+V+C G W+KY +++ R P
Sbjct: 190 RLVLCLGCFWIKYKKIKPRFDEEP 213
>At4g02150.1 68417.m00287 importin alpha-2 subunit identical to
importin alpha-2 subunit (Karyopherin alpha-2 subunit)
(KAP alpha) SP:O04294 from [Arabidopsis thaliana]
Length = 531
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Frame = +3
Query: 210 WSLAYFSQRKPQQTT-IRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEK-EGAEMIE 383
W+L + + T I + +PIF+QLL + E+++ A L +A + + +++
Sbjct: 141 WALTNIASGTSENTNVIIESGAVPIFIQLLSSASEDVREQAVWALGNVAGDSPKCRDLVL 200
Query: 384 AEG--QPLRSL---NCCIQEMKGSPRTLQPFCSACP 476
+ G PL S N + ++ + TL FC P
Sbjct: 201 SYGAMTPLLSQFNENTKLSMLRNATWTLSNFCRGKP 236
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -2
Query: 196 RSPPYERRQRKQYWLHRPKSCVVSGCRCRHASAG-APDDERRRVPATERS-WRNRAP 32
+S P R Q+ + + R V+ R +SA +PD RRR P++ RS R+R+P
Sbjct: 567 KSSPSSRHQKARSPVRRRSPTPVNRRSRRSSSASRSPDRRRRRSPSSSRSPSRSRSP 623
>At2g26780.1 68415.m03212 expressed protein contains Pfam profile TBP
(TATA-binding protein) -interacting protein 120 (TIP120);
contains TIGRFAM profile TIGR01612: reticulocyte binding
protein
Length = 1866
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +3
Query: 264 QNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKEGAEMIEAEGQPLRSLNCCIQEMKGSP 443
+ +IP QL+ + RV L V+K G+E+ G LR L +E K S
Sbjct: 1375 EQLIPRLTQLVRGGVGLNTRVGVASFISLLVQKVGSEIKPFTGMLLRLLFPVAKEEKSS- 1433
Query: 444 RTLQPFCSAC 473
+ F SAC
Sbjct: 1434 AAKRAFSSAC 1443
>At2g05810.2 68415.m00627 armadillo/beta-catenin repeat family
protein weak similarity to CCLS 65 [Silene latifolia]
GI:2570102; contains Pfam profile PF00514:
Armadillo/beta-catenin-like repeat
Length = 580
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 246 QTTIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKE-GAEMIEAEGQPLRSLNCCI 422
+TT+ ++ IP+ +QLL + ++Q A + ++ E ++I E L+ L +
Sbjct: 319 RTTLAEEGAIPVLIQLLISGSSSVQEKTANFISLISSSGEYYRDLIVRERGGLQILIHLV 378
Query: 423 QEMKGSPRTLQ 455
QE +P T++
Sbjct: 379 QE-SSNPDTIE 388
>At2g05810.1 68415.m00626 armadillo/beta-catenin repeat family
protein weak similarity to CCLS 65 [Silene latifolia]
GI:2570102; contains Pfam profile PF00514:
Armadillo/beta-catenin-like repeat
Length = 580
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 246 QTTIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKE-GAEMIEAEGQPLRSLNCCI 422
+TT+ ++ IP+ +QLL + ++Q A + ++ E ++I E L+ L +
Sbjct: 319 RTTLAEEGAIPVLIQLLISGSSSVQEKTANFISLISSSGEYYRDLIVRERGGLQILIHLV 378
Query: 423 QEMKGSPRTLQ 455
QE +P T++
Sbjct: 379 QE-SSNPDTIE 388
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 521 VNSIGVSSCNRGACLRTCGTERLQRTW 441
VN I S+ N+ C+ TCG ++ + W
Sbjct: 465 VNDIAFSTPNKQLCVTTCGDDKTIKVW 491
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 521 VNSIGVSSCNRGACLRTCGTERLQRTW 441
VN I S+ N+ C+ TCG ++ + W
Sbjct: 465 VNDIAFSTPNKQLCVTTCGDDKTIKVW 491
>At5g65200.1 68418.m08200 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 556
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 213 SLAYFSQRKPQQTTIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKEGAEMIEAEG 392
SL S K + TI + +PI + +L + Q AAG + L++E + I G
Sbjct: 289 SLVNLSLDKKNKLTIVRLGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLG 348
Query: 393 --QPL 401
QPL
Sbjct: 349 ALQPL 353
>At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 636
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 246 QTTIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKE 365
+T +R + IP V+LL +QR AAG L LA + +
Sbjct: 192 KTRVRVEGGIPPLVELLEFSDSKVQRAAAGALRTLAFKND 231
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 246 QTTIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKE 365
+T +R + IP V+LL +QR AAG L LA + +
Sbjct: 191 KTRVRVEGGIPPLVELLEFSDSKVQRAAAGALRTLAFKND 230
>At3g28180.1 68416.m03521 glycosyl transferase family 2 protein
similar to beta-(1-3)-glucosyl transferase GB:AAC62210
GI:3687658 from [Bradyrhizobium japonicum], cellulose
synthase from Agrobacterium tumeficiens [gi:710492] and
Agrobacterium radiobacter [gi:710493]; contains Pfam
glycosyl transferase, group 2 family protein domain
PF00535
Length = 673
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -2
Query: 307 ISLNNSCTNIGMTFCC-RIVVCCGFLWLKYARLQRRL 200
ISL+ CT + + R+V+C G W+K+ +++ +L
Sbjct: 149 ISLSRFCTVLFLIQSLDRLVLCLGCFWIKFKKIEPKL 185
>At5g42340.1 68418.m05155 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein low similarity
to immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200, GI:14582198;
contains Pfam profiles PF04564: U-box domain, PF00514:
Armadillo/beta-catenin-like repeat
Length = 656
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 255 IRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKEGAEMIEAEG 392
I IP+ VQLL IQ A L L++++ ++I EG
Sbjct: 413 IANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEG 458
>At3g06720.2 68416.m00797 importin alpha-1 subunit, putative (IMPA1)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 532
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Frame = +3
Query: 210 WSLAYFSQRKPQQT-TIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKEGA-EMIE 383
W+L + T + N +PIFVQLL + ++++ A L +A + +++
Sbjct: 138 WALTNIASGTSDHTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVAGDSPRCRDLVL 197
Query: 384 AEGQPLRSLN-----CCIQEMKGSPRTLQPFCSACPK 479
G L LN + ++ + TL FC P+
Sbjct: 198 GCGALLPLLNQLNEHAKLSMLRNATWTLSNFCRGKPQ 234
>At3g06720.1 68416.m00796 importin alpha-1 subunit, putative (IMPA1)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 532
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Frame = +3
Query: 210 WSLAYFSQRKPQQT-TIRQQNVIPIFVQLLFNEIENIQRVAAGVLCELAVEKEGA-EMIE 383
W+L + T + N +PIFVQLL + ++++ A L +A + +++
Sbjct: 138 WALTNIASGTSDHTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVAGDSPRCRDLVL 197
Query: 384 AEGQPLRSLN-----CCIQEMKGSPRTLQPFCSACPK 479
G L LN + ++ + TL FC P+
Sbjct: 198 GCGALLPLLNQLNEHAKLSMLRNATWTLSNFCRGKPQ 234
>At1g27050.1 68414.m03298 homeobox-leucine zipper family protein
contains Pfam profile:PF00046 Homeobox domain and Pfam
profile:PF00076 RNA recognition motif
Length = 444
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 58 PLREHGAVHHLVRLLMRAYNDTQRQRSSSGGGANTAYADGVRMEEIV 198
PLR+HG L ++ +D + S GG ++ A V+ IV
Sbjct: 392 PLRKHGRSSRLASAIVNPRSDNTKGISGDGGISSPATTSEVKQRNIV 438
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 521 VNSIGVSSCNRGACLRTCGTERLQRTW 441
VN I S+ N+ C+ TCG ++ + W
Sbjct: 465 VNDISFSTPNKQLCVITCGDDKTIKVW 491
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 521 VNSIGVSSCNRGACLRTCGTERLQRTW 441
VN I S+ N+ C+ TCG ++ + W
Sbjct: 465 VNDISFSTPNKQLCVITCGDDKTIKVW 491
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 27.5 bits (58), Expect = 10.0
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 684 HRIYRYLIVALLVKGWSGPIQALVTLLW-PEHVLYIGL 574
H+IY + LVK GP +AL+ L W P H + + +
Sbjct: 317 HKIYIWDRAGHLVKILEGPKEALIDLAWHPVHPIIVSV 354
>At1g70300.1 68414.m08088 potassium transporter, putative similar to
potassium transporter HAK2p [Mesembryanthemum
crystallinum] gi|14091471|gb|AAK53759; KUP/HAK/KT
Transporter family member, PMID:11500563; contains Pfam
profile PF02705: K+ potassium transporter
Length = 782
Score = 27.5 bits (58), Expect = 10.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 368 SFFLYGQFTEHAGGNALNIFNLIEQQLHEYRND 270
+F LY HA N+L L ++QL EY+ D
Sbjct: 93 TFALYSLLCRHARVNSLPSCQLADEQLIEYKTD 125
>At1g28390.1 68414.m03488 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 470
Score = 27.5 bits (58), Expect = 10.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 210 NGAFHDLLHTNAVSVSSIGSTARRAALSLGVVVGTH 103
NG HD LH+ + S + S RR +L + + H
Sbjct: 138 NGTLHDQLHSRSSLDSRLSSWNRRIKHALQIAIAVH 173
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,076,480
Number of Sequences: 28952
Number of extensions: 368089
Number of successful extensions: 1219
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1653386488
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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