Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30488
(306 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 83 2e-15
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 74 7e-13
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 74 7e-13
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 73 2e-12
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 66 1e-10
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 57 9e-08
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 56 1e-07
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 56 1e-07
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 54 5e-07
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 52 3e-06
UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus cabal... 52 3e-06
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 50 1e-05
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 47 7e-05
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 46 1e-04
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 42 0.003
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 33 1.2
UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31; Gam... 33 1.7
UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein ... 33 1.7
UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2; Anaer... 32 2.2
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 32 2.2
UniRef50_Q0VPP8 Cluster: ABC transporter, permease protein, puta... 32 2.9
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 31 3.8
UniRef50_A5E683 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_Q8VRI8 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_Q0YH46 Cluster: Putative uncharacterized protein precur... 30 8.8
UniRef50_Q10QC8 Cluster: Salt-inducible protein, putative, expre... 30 8.8
UniRef50_Q6NE28 Cluster: Putative methylase; n=1; Leptospira pha... 30 8.8
UniRef50_A5DYV8 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 30 8.8
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 82.6 bits (195), Expect = 2e-15
Identities = 42/81 (51%), Positives = 47/81 (58%)
Frame = +3
Query: 3 HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXX 182
HLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 118 HLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERI 177
Query: 183 XXXXXXLLQTFAREDEAALTA 245
L+ A+EDE A A
Sbjct: 178 ATKKQELIALHAKEDEIAAKA 198
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 73.7 bits (173), Expect = 7e-13
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +3
Query: 3 HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 125
H+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 110 HMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 150
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 73.7 bits (173), Expect = 7e-13
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +3
Query: 3 HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 125
H+YHSLY+K KGNVFKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 118 HMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 72.5 bits (170), Expect = 2e-12
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = +3
Query: 3 HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 125
H+YHS+Y+K KGNVFKNKRVLME IH+ KAEKAR K L+DQ
Sbjct: 138 HMYHSMYLKCKGNVFKNKRVLMEAIHKSKAEKAREKSLADQ 178
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 66.5 bits (155), Expect = 1e-10
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +3
Query: 3 HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 125
HLYH LY + KGN FKNKRVL+++IH+KKAE+ R K LSDQ
Sbjct: 118 HLYHLLYQQCKGNQFKNKRVLIDHIHKKKAERLRAKQLSDQ 158
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 56.8 bits (131), Expect = 9e-08
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = +3
Query: 3 HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 125
H+ HSLY++ K NVFKN+ +LME IH+ KA+KA K+L+DQ
Sbjct: 115 HMCHSLYLRVKRNVFKNQWILMEQIHKPKADKACKKLLADQ 155
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 56.4 bits (130), Expect = 1e-07
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +3
Query: 3 HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 125
HLY SLY+K+KGNVFKNK++L E+IH+ K E+ R + D+
Sbjct: 118 HLYRSLYLKSKGNVFKNKKILTEFIHKAKNEQKRKEEFLDK 158
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 56.4 bits (130), Expect = 1e-07
Identities = 23/41 (56%), Positives = 33/41 (80%)
Frame = +3
Query: 3 HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 125
H+Y LYM+AKGNVF+NKR L+E+IH+ K EK + + L++Q
Sbjct: 138 HVYRDLYMRAKGNVFRNKRNLVEHIHKIKNEKKKERQLAEQ 178
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 54.4 bits (125), Expect = 5e-07
Identities = 23/40 (57%), Positives = 33/40 (82%)
Frame = +3
Query: 6 LYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 125
+YHSL +K KGNVFKNK L+++IH+ KA++A K+L+DQ
Sbjct: 574 MYHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQ 613
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = +3
Query: 3 HLYHSLYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQ 125
HLY SLY+K KGNV K +KR+ E+I + KA+ A+ K+LSDQ
Sbjct: 111 HLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQ 153
>UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus
caballus|Rep: Ribosomal protein L19 - Equus caballus
(Horse)
Length = 81
Score = 52.0 bits (119), Expect = 3e-06
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = +1
Query: 22 T*RRRVMCSRTSVCSWSTSTGXXXXXXXXXXXXXXXXPAAIK*RRHASAARNVLPPRRRN 201
T +RR MCS+T SW+TST PA ++ R+HASAA++ PR+R
Sbjct: 1 TRKRRAMCSKTRGFSWNTSTSRRQTRLARSFWRTRLRPAGLRPRKHASAAKSGSRPRKRK 60
Query: 202 CCRPSLEKTKPR 237
R S + +PR
Sbjct: 61 SSRLSPRRKRPR 72
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 49.6 bits (113), Expect = 1e-05
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +3
Query: 3 HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 125
H+ HSLY KAKG VFKNK +L+E+ ++ KA+K K+L+ Q
Sbjct: 65 HMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQ 105
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 47.2 bits (107), Expect = 7e-05
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +3
Query: 3 HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 125
HLY +LY KAKGN+FKNKRVL+E+I + E+ K ++
Sbjct: 118 HLYETLYAKAKGNMFKNKRVLLEHIVGMQKEQELEKKKKEE 158
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 46.4 bits (105), Expect = 1e-04
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = -2
Query: 191 LGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVE 18
+GGN + LA LL +AA L L+ L LL L DVL E+ L+LEH+TL L +E
Sbjct: 51 VGGNLLCSLLASLLCLLAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIE 108
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 9 YHSLYMKAKGNVFKNKRVLMEYIHRKKAEK 98
YH ++MK KG V+KNK VLME +H+ E+
Sbjct: 62 YHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 24 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 125
MK KGN+ NKR + +AEKAR + LSDQ
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQ 34
>UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31;
Gammaproteobacteria|Rep: Flagellar motor protein MotB -
Vibrio vulnificus
Length = 300
Score = 32.7 bits (71), Expect = 1.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 143 IAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 24
I G S++A+ RPG P+DV+ + T+ + TL H
Sbjct: 51 IPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFH 90
>UniRef50_A3QGM1 Cluster: Tetratricopeptide TPR_2 repeat protein
precursor; n=1; Shewanella loihica PV-4|Rep:
Tetratricopeptide TPR_2 repeat protein precursor -
Shewanella loihica (strain BAA-1088 / PV-4)
Length = 718
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = -2
Query: 197 LLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHI 39
L LG +T+L A A L+ ++ GL+ A +RPGL+ LL ++ ++ H + E I
Sbjct: 553 LNLGNDTYLEATARLMDTLSRGLAGEAYLIRPGLI-LLTLNEVNAHQALQERI 604
>UniRef50_A7HD11 Cluster: Polysulphide reductase NrfD; n=2;
Anaeromyxobacter|Rep: Polysulphide reductase NrfD -
Anaeromyxobacter sp. Fw109-5
Length = 417
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 233 GFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLS 90
G V +G + +L GG + A +A LL +A G + A +R GL++
Sbjct: 3 GVVEFVKGCARLVLTGGRAYKAWMAALLALVAIGATAYAHQMRAGLIA 50
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/39 (33%), Positives = 27/39 (69%)
Frame = +3
Query: 9 YHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 125
+ Y +AKG++FK++ + + I ++KA++ R K L++Q
Sbjct: 120 FRVFYKQAKGHLFKHRFHMKDCIIKRKADEQRAKELAEQ 158
>UniRef50_Q0VPP8 Cluster: ABC transporter, permease protein,
putative; n=1; Alcanivorax borkumensis SK2|Rep: ABC
transporter, permease protein, putative - Alcanivorax
borkumensis (strain SK2 / ATCC 700651 / DSM 11573)
Length = 801
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -2
Query: 263 NVVLLLSGKRGFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLL 84
++++++ G+R + + LQ F L GG LA L L I G+ L L LL
Sbjct: 715 HLLVVIGGRRALLRKTAALQAFYLFGGAALLANLIHLAALIPLGMRLFDSQLPLSPWLLL 774
Query: 83 P 81
P
Sbjct: 775 P 775
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2
Query: 101 GLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*M 3
GL+ L VDVLHE+ L LE+I L ++ V+ M
Sbjct: 65 GLVCLQFVDVLHENPLALEYIPFDLQIQGVIYM 97
>UniRef50_A5E683 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 2219
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 272 IVYNV-VLLLSGKRGFVFSSEGLQQFLLLGGN 180
I YN VL GF+FS+E L Q L LGGN
Sbjct: 893 IKYNEDVLRRYDTMGFIFSNESLNQILYLGGN 924
>UniRef50_Q8VRI8 Cluster: Putative uncharacterized protein; n=1;
Serratia marcescens|Rep: Putative uncharacterized
protein - Serratia marcescens
Length = 178
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -2
Query: 209 LQQFLLLGGNTFLAALACLLYFIAAGLSLVA 117
L LLGG +LA L LY+I AGL L+A
Sbjct: 20 LSGLYLLGGGIWLAKLGGSLYYIIAGLVLLA 50
>UniRef50_Q0YH46 Cluster: Putative uncharacterized protein
precursor; n=1; Geobacter sp. FRC-32|Rep: Putative
uncharacterized protein precursor - Geobacter sp. FRC-32
Length = 344
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = -2
Query: 272 IVYNVVLLLSGKRGFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSL 123
I+ + +L SG FVF + L FLL+G ++AA+A + + A +++
Sbjct: 125 IIGGIFVLFSGLLYFVFMAAWLNFFLLVGRLKYIAAVAGAVAIVIATINI 174
>UniRef50_Q10QC8 Cluster: Salt-inducible protein, putative,
expressed; n=3; Oryza sativa|Rep: Salt-inducible
protein, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 796
Score = 30.3 bits (65), Expect = 8.8
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -2
Query: 197 LLLGGNTFLAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVL-HEHTLVLEHI 39
LLL L+ +CL + L +HL P LLS +P+D L H H +L H+
Sbjct: 79 LLLAYRRHLSPPSCLPSLVPLLPVLPYRHLLPLLLSFVPLDPLRHLHRHLLAHL 132
>UniRef50_Q6NE28 Cluster: Putative methylase; n=1; Leptospira phage
LE1|Rep: Putative methylase - Leptospira phage LE1
Length = 1971
Score = 30.3 bits (65), Expect = 8.8
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = -2
Query: 248 LSGKRGFVFSSEGLQQFLLLGGNTFLAALACLLYFIAAGLSLVAKHLRPG--LLSLLPVD 75
++GK + ++ +++ + L GNT +A +C+ + + +H RPG L +++ VD
Sbjct: 1638 INGKCKIIIGTDVIKEGVDLNGNTAVAYNSCIDWNPTTEVQKRGRHHRPGNLLSNVMWVD 1697
Query: 74 VLHEHTL 54
VL E ++
Sbjct: 1698 VLMEDSI 1704
>UniRef50_A5DYV8 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 993
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 173 LAALACLLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHI 39
LA L CLL A S H++P L L +DV + ++EH+
Sbjct: 720 LAVLDCLLSLAAVSNSNSNTHVKPNLSDELIIDVKNARHPIIEHL 764
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 30.3 bits (65), Expect = 8.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 9 YHSLYMKAKGNVFKNKRVLMEYIHRK 86
Y LY K KGN+FK++ L+ Y+ +K
Sbjct: 119 YWDLYKKVKGNLFKSRSHLLLYLKQK 144
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,459,192
Number of Sequences: 1657284
Number of extensions: 3349323
Number of successful extensions: 11823
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 11629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11816
length of database: 575,637,011
effective HSP length: 78
effective length of database: 446,368,859
effective search space used: 10266483757
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -