Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30488
         (306 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal prot...    83   9e-17
BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p pro...    83   9e-17
AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p pro...    83   9e-17
AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB...    83   9e-17
AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA...    83   9e-17
X95453-2|CAA64723.1|  980|Drosophila melanogaster homologous to ...    27   3.4  
X95453-1|CAA64722.1|  537|Drosophila melanogaster homologous to ...    27   3.4  
BT021276-1|AAX33424.1|  537|Drosophila melanogaster RE44971p pro...    27   3.4  
AE014297-1115|AAN13462.1|  537|Drosophila melanogaster CG3985-PA...    27   3.4  
AE014297-1114|AAO41538.2|  981|Drosophila melanogaster CG3985-PF...    27   3.4  
AE014297-1113|AAN13463.2|  597|Drosophila melanogaster CG3985-PE...    27   3.4  
AE014297-1112|AAF54506.3| 1041|Drosophila melanogaster CG3985-PD...    27   3.4  
AY071083-1|AAL48705.1|  637|Drosophila melanogaster RE15157p pro...    27   6.0  
AE014297-2197|AAN13707.1|  637|Drosophila melanogaster CG14880-P...    27   6.0  
AE014297-2196|AAF55306.2|  637|Drosophila melanogaster CG14880-P...    27   6.0  
AE014134-3011|AAF53736.3| 1318|Drosophila melanogaster CG31792-P...    26   7.9  

>X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal protein
           L19 protein.
          Length = 203

 Score = 82.6 bits (195), Expect = 9e-17
 Identities = 42/81 (51%), Positives = 47/81 (58%)
 Frame = +3

Query: 3   HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXX 182
           HLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ                   
Sbjct: 118 HLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERI 177

Query: 183 XXXXXXLLQTFAREDEAALTA 245
                 L+   A+EDE A  A
Sbjct: 178 ATKKQELIALHAKEDEIAAKA 198


>BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p
           protein.
          Length = 208

 Score = 82.6 bits (195), Expect = 9e-17
 Identities = 42/81 (51%), Positives = 47/81 (58%)
 Frame = +3

Query: 3   HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXX 182
           HLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ                   
Sbjct: 123 HLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERI 182

Query: 183 XXXXXXLLQTFAREDEAALTA 245
                 L+   A+EDE A  A
Sbjct: 183 ATKKQELIALHAKEDEIAAKA 203


>AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p
           protein.
          Length = 221

 Score = 82.6 bits (195), Expect = 9e-17
 Identities = 42/81 (51%), Positives = 47/81 (58%)
 Frame = +3

Query: 3   HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXX 182
           HLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ                   
Sbjct: 136 HLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERI 195

Query: 183 XXXXXXLLQTFAREDEAALTA 245
                 L+   A+EDE A  A
Sbjct: 196 ATKKQELIALHAKEDEIAAKA 216


>AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB,
           isoform B protein.
          Length = 203

 Score = 82.6 bits (195), Expect = 9e-17
 Identities = 42/81 (51%), Positives = 47/81 (58%)
 Frame = +3

Query: 3   HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXX 182
           HLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ                   
Sbjct: 118 HLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERI 177

Query: 183 XXXXXXLLQTFAREDEAALTA 245
                 L+   A+EDE A  A
Sbjct: 178 ATKKQELIALHAKEDEIAAKA 198


>AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA,
           isoform A protein.
          Length = 203

 Score = 82.6 bits (195), Expect = 9e-17
 Identities = 42/81 (51%), Positives = 47/81 (58%)
 Frame = +3

Query: 3   HLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXX 182
           HLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ                   
Sbjct: 118 HLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERI 177

Query: 183 XXXXXXLLQTFAREDEAALTA 245
                 L+   A+EDE A  A
Sbjct: 178 ATKKQELIALHAKEDEIAAKA 198


>X95453-2|CAA64723.1|  980|Drosophila melanogaster homologous to
           synapsin I protein.
          Length = 980

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +1

Query: 190 RRRNCCRPSLEKTKP-RLPLRSNTT 261
           R +N CRPS+ +T P +LP RS+ +
Sbjct: 391 RMQNVCRPSMAQTGPGKLPSRSSVS 415


>X95453-1|CAA64722.1|  537|Drosophila melanogaster homologous to
           synapsin I protein.
          Length = 537

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +1

Query: 190 RRRNCCRPSLEKTKP-RLPLRSNTT 261
           R +N CRPS+ +T P +LP RS+ +
Sbjct: 391 RMQNVCRPSMAQTGPGKLPSRSSVS 415


>BT021276-1|AAX33424.1|  537|Drosophila melanogaster RE44971p
           protein.
          Length = 537

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +1

Query: 190 RRRNCCRPSLEKTKP-RLPLRSNTT 261
           R +N CRPS+ +T P +LP RS+ +
Sbjct: 391 RMQNVCRPSMAQTGPGKLPSRSSVS 415


>AE014297-1115|AAN13462.1|  537|Drosophila melanogaster CG3985-PA,
           isoform A protein.
          Length = 537

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +1

Query: 190 RRRNCCRPSLEKTKP-RLPLRSNTT 261
           R +N CRPS+ +T P +LP RS+ +
Sbjct: 391 RMQNVCRPSMAQTGPGKLPSRSSVS 415


>AE014297-1114|AAO41538.2|  981|Drosophila melanogaster CG3985-PF,
           isoform F protein.
          Length = 981

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +1

Query: 190 RRRNCCRPSLEKTKP-RLPLRSNTT 261
           R +N CRPS+ +T P +LP RS+ +
Sbjct: 391 RMQNVCRPSMAQTGPGKLPSRSSVS 415


>AE014297-1113|AAN13463.2|  597|Drosophila melanogaster CG3985-PE,
           isoform E protein.
          Length = 597

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +1

Query: 190 RRRNCCRPSLEKTKP-RLPLRSNTT 261
           R +N CRPS+ +T P +LP RS+ +
Sbjct: 451 RMQNVCRPSMAQTGPGKLPSRSSVS 475


>AE014297-1112|AAF54506.3| 1041|Drosophila melanogaster CG3985-PD,
           isoform D protein.
          Length = 1041

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +1

Query: 190 RRRNCCRPSLEKTKP-RLPLRSNTT 261
           R +N CRPS+ +T P +LP RS+ +
Sbjct: 451 RMQNVCRPSMAQTGPGKLPSRSSVS 475


>AY071083-1|AAL48705.1|  637|Drosophila melanogaster RE15157p
           protein.
          Length = 637

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 169 ARNVLPPRRRNCCR-PSLEKTKPRLPLRSNTT 261
           +R +LPP        PS +  KPR+P+ ++TT
Sbjct: 195 SRTILPPAYEPQIELPSAQSAKPRIPIITSTT 226


>AE014297-2197|AAN13707.1|  637|Drosophila melanogaster CG14880-PB,
           isoform B protein.
          Length = 637

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 169 ARNVLPPRRRNCCR-PSLEKTKPRLPLRSNTT 261
           +R +LPP        PS +  KPR+P+ ++TT
Sbjct: 195 SRTILPPAYEPQIELPSAQSAKPRIPIITSTT 226


>AE014297-2196|AAF55306.2|  637|Drosophila melanogaster CG14880-PA,
           isoform A protein.
          Length = 637

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 169 ARNVLPPRRRNCCR-PSLEKTKPRLPLRSNTT 261
           +R +LPP        PS +  KPR+P+ ++TT
Sbjct: 195 SRTILPPAYEPQIELPSAQSAKPRIPIITSTT 226


>AE014134-3011|AAF53736.3| 1318|Drosophila melanogaster CG31792-PA
           protein.
          Length = 1318

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 209 LQQFLLLGGNTFLAALACLLYFI-AAGLSLVAKHLR 105
           +Q FLL GGN  + A+   L+ I A    +V  +LR
Sbjct: 825 IQDFLLFGGNIIVIAIVNPLFLIPALAFGIVIYYLR 860


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,985,963
Number of Sequences: 53049
Number of extensions: 160854
Number of successful extensions: 686
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)