BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30488 (306 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 25 0.21 DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 25 0.21 DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 3.4 DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 21 4.5 AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein. 21 4.5 AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 20 6.0 AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 20 7.9 >DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 25.0 bits (52), Expect = 0.21 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +1 Query: 181 LPPRRRNCCRPSLEKTKPR 237 + PR++NCCR L K R Sbjct: 393 MQPRKKNCCRSWLSKFPTR 411 >DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 25.0 bits (52), Expect = 0.21 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +1 Query: 181 LPPRRRNCCRPSLEKTKPR 237 + PR++NCCR L K R Sbjct: 393 MQPRKKNCCRSWLSKFPTR 411 >DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor protein. Length = 459 Score = 21.0 bits (42), Expect = 3.4 Identities = 8/26 (30%), Positives = 16/26 (61%) Frame = -2 Query: 173 LAALACLLYFIAAGLSLVAKHLRPGL 96 L L+C+L+F+ + + ++R GL Sbjct: 205 LYQLSCILFFLIPMVFIAVLYIRIGL 230 >DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein protein. Length = 250 Score = 20.6 bits (41), Expect = 4.5 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = +1 Query: 175 NVLPPRRRNCCRPSLEKTKPRLPLRSNTT 261 N L RR R LEK K +PL T+ Sbjct: 54 NELEKNRRAHLRNCLEKLKVLVPLGPETS 82 >AY656663-1|AAT68000.1| 148|Apis mellifera pteropsin protein. Length = 148 Score = 20.6 bits (41), Expect = 4.5 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -3 Query: 121 SLSIFVLAFSAFFLWMYSMSTRL 53 +LSI A F+W+Y++S L Sbjct: 9 ALSIRHAVILASFVWIYALSLSL 31 >AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type D2 protein. Length = 456 Score = 20.2 bits (40), Expect = 6.0 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = +3 Query: 33 KGNVFKNKRVLMEYIHRKKAEK 98 +GN F R L ++ KKA K Sbjct: 314 RGNNFSLSRKLAKFAKEKKAAK 335 >AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic acetylcholine Apisa7-2 subunit protein. Length = 461 Score = 19.8 bits (39), Expect = 7.9 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = +1 Query: 178 VLPPRRRNCC 207 V PPRR+N C Sbjct: 338 VEPPRRKNNC 347 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 60,164 Number of Sequences: 438 Number of extensions: 1091 Number of successful extensions: 7 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 49 effective length of database: 124,881 effective search space used: 6493812 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 38 (20.3 bits)
- SilkBase 1999-2023 -