Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30487
         (737 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q12VP3 Cluster: Transmembrane oligosaccharyl transferas...    34   4.2  
UniRef50_A7IXN3 Cluster: Putative uncharacterized protein b708R;...    33   7.3  
UniRef50_Q0YUE8 Cluster: Putative uncharacterized protein; n=1; ...    33   7.3  
UniRef50_Q74M36 Cluster: NEQ529; n=1; Nanoarchaeum equitans|Rep:...    33   7.3  
UniRef50_O51408 Cluster: Putative uncharacterized protein BB0452...    33   9.7  
UniRef50_A0BLH5 Cluster: Chromosome undetermined scaffold_114, w...    33   9.7  

>UniRef50_Q12VP3 Cluster: Transmembrane oligosaccharyl transferase;
           n=1; Methanococcoides burtonii DSM 6242|Rep:
           Transmembrane oligosaccharyl transferase -
           Methanococcoides burtonii (strain DSM 6242)
          Length = 824

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = -3

Query: 237 ISISKRLYTLRSQVSVQ*NPSLEIKANTILLSFL--NTRTGRRHENGYETLRNMFFLTIR 64
           +S+S   +  RS +    +   E   +T+   FL    +T R H+  +E L+N  F ++R
Sbjct: 150 VSVSSGQFLSRSMIGFNDHHIAETLLSTVTAMFLIMAVKTARDHDISFEGLKNGKFSSLR 209

Query: 63  YNILYFVL 40
            ++ YF+L
Sbjct: 210 SSLPYFIL 217


>UniRef50_A7IXN3 Cluster: Putative uncharacterized protein b708R;
           n=3; Chlorovirus|Rep: Putative uncharacterized protein
           b708R - Paramecium bursaria Chlorella virus NY2A
           (PBCV-NY2A)
          Length = 131

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = +2

Query: 230 IDICSIRNLTQ--YFSHISYSGL*ACDEWNNLCSRIFNRFLYLYI--DEKLLIVYKIN 391
           I +CS+  +T   +FSHI Y  L        L  R+F  FLY+Y+  ++   ++ K N
Sbjct: 66  IRVCSLPTITSTIFFSHIKYDELRETQHHVLLRLRVFVHFLYVYVLWNDVFFVIRKCN 123


>UniRef50_Q0YUE8 Cluster: Putative uncharacterized protein; n=1;
           Chlorobium ferrooxidans DSM 13031|Rep: Putative
           uncharacterized protein - Chlorobium ferrooxidans DSM
           13031
          Length = 600

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
 Frame = -1

Query: 212 LCVHRFPYNETLV*KLK-RIQYCCRF*TLEPGVDMKMAMK-HFEICF---SLLFVIIYC 51
           LC H FP  E    K   ++QYCC +   +P +  ++  K H+ + F   SLL V+I+C
Sbjct: 45  LCQHFFPLAELHQRKGGIKLQYCCNYHGSQPSLRARINRKCHYILSFVTKSLLAVVIFC 103


>UniRef50_Q74M36 Cluster: NEQ529; n=1; Nanoarchaeum equitans|Rep:
           NEQ529 - Nanoarchaeum equitans
          Length = 133

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -1

Query: 146 CRF*TLEPGVDMKMAMKHFEICFSLLFVIIYCILF*RNNHIFIE 15
           C + T  P +D+ + +KH  I  SLL V+++ IL+      F E
Sbjct: 34  CAYLTFLPDLDLVLGIKHRTITHSLLIVLLFFILYYLTKFFFFE 77


>UniRef50_O51408 Cluster: Putative uncharacterized protein BB0452;
           n=3; Borrelia burgdorferi group|Rep: Putative
           uncharacterized protein BB0452 - Borrelia burgdorferi
           (Lyme disease spirochete)
          Length = 234

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 16/57 (28%), Positives = 31/57 (54%)
 Frame = +2

Query: 563 IIPSILLRTFIYITIIACPSNRLGTKYLDGTKII*LACKIQVIIKYGLSFMNIAPIK 733
           I+PSI+    +++ +   P +    K+L+G KI  +   I V++K+    +N + IK
Sbjct: 136 ILPSIIAIIMVFLYLKLVPDSIHVKKFLEGAKISSIIIMITVVLKFSKKMLNDSIIK 192


>UniRef50_A0BLH5 Cluster: Chromosome undetermined scaffold_114,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_114,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 501

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
 Frame = -3

Query: 456 IISCIMQNIIAVTNSSRFCYM*LILYTINNFSSIYKYRKRLKILEHKLFHS---SHAYKP 286
           +I CIM  +I +  S +F  + L     NN+S + K  K++K+++ +L+++    H  + 
Sbjct: 306 VIDCIMNKLIELNISLKFSEVQLEKEYQNNYSYL-KLLKKIKMIDKQLYYNEIQKHIIQQ 364

Query: 285 LYEM*LKYCVKLRIEQISISK 223
            Y   LK     ++EQ+++SK
Sbjct: 365 SYY--LKNVTIDQVEQLTLSK 383


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,434,359
Number of Sequences: 1657284
Number of extensions: 12576330
Number of successful extensions: 26778
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26770
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)