Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30487
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81055-3|CAB02892.2|  434|Caenorhabditis elegans Hypothetical pr...    32   0.37 
AL132898-3|CAC14412.1|  346|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z81542-5|CAB04420.2|  433|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF016685-8|AAG24150.1|  340|Caenorhabditis elegans Seven tm rece...    28   6.0  
Z81147-9|CAB03538.1|  349|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U53342-1|AAA96213.2|  371|Caenorhabditis elegans Suppressor of a...    28   7.9  

>Z81055-3|CAB02892.2|  434|Caenorhabditis elegans Hypothetical
           protein F01G10.3 protein.
          Length = 434

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 314 NLCSRIFNRFLYLYIDEKLLIVYKINYI*QNLELFVTAIIFCM 442
           N  S +FNR L++Y D+   ++Y+  Y+   ++  +T   F M
Sbjct: 216 NCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIITNFGFLM 258


>AL132898-3|CAC14412.1|  346|Caenorhabditis elegans Hypothetical
           protein Y59A8B.4 protein.
          Length = 346

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = -1

Query: 320 INYSIRRMPTNHYTKCD*NIASNYVSNKYQFQKGYILCVHRFPYNETLV*KLKRIQYCC 144
           I Y I    T H+ +   NIA N+++         +L VH+ PY E ++  + R++Y C
Sbjct: 258 IVYLITAFITKHFDQIANNIALNFLALHGLTSSTVMLIVHK-PYREAVI-NIFRLRYIC 314


>Z81542-5|CAB04420.2|  433|Caenorhabditis elegans Hypothetical
           protein F49A5.8 protein.
          Length = 433

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 311 NNLCSRIFNRFLYLYIDEKLLIVYKINY--I*QNLELFVTAIIFCMIHEMIL 460
           N+    ++N + Y +  E   + + I Y  +  N+ + + AII C++H MIL
Sbjct: 47  NDYYGFVYNEYEYDFPTETPTLKHNIQYGILDSNVFIGILAIILCLVHLMIL 98


>AF016685-8|AAG24150.1|  340|Caenorhabditis elegans Seven tm
           receptor protein 85 protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 530 IYFFNICYINRIIPSILLRTFIYITIIACPSNRLGTKYLDG 652
           I+    C I   + ++L+  FIY  I+ C S +L  KY DG
Sbjct: 87  IFLLGFCAIYYTLITLLVVHFIYRYIVICDSAKL--KYFDG 125


>Z81147-9|CAB03538.1|  349|Caenorhabditis elegans Hypothetical
           protein T09E11.11 protein.
          Length = 349

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 107 FSCRRPVLVFKNDSNIVFALISRLGFHCTETCERKVYNL 223
           FS R+ +LV+   S IV  L   L     E C+R  +NL
Sbjct: 85  FSQRKQILVYVTISFIVLVLFYSLSLTTEENCQRIGWNL 123


>U53342-1|AAA96213.2|  371|Caenorhabditis elegans Suppressor of
           activated let-60ras protein 7, isoform b protein.
          Length = 371

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 544 YLLYKSNNTVHIIADVYLHNNHCL 615
           +LLY++  TV  IA ++L+  HCL
Sbjct: 100 FLLYRTAGTVFFIACLFLNLTHCL 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,934,970
Number of Sequences: 27780
Number of extensions: 326207
Number of successful extensions: 663
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)