Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30486X
(635 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2, M... 162 2e-40
At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,... 162 2e-40
At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,... 162 2e-40
At5g65360.1 68418.m08221 histone H3 identical to histone H3 from... 160 6e-40
At5g10400.1 68418.m01206 histone H3 identical to several histone... 160 6e-40
At5g10390.1 68418.m01205 histone H3 identical to histone H3 from... 160 6e-40
At3g27360.1 68416.m03421 histone H3 identical to histone H3 from... 160 6e-40
At1g09200.1 68414.m01027 histone H3 identical to histone H3 from... 160 6e-40
At5g65350.1 68418.m08220 histone H3 nearly identical to histone ... 153 9e-38
At1g75600.1 68414.m08784 histone H3.2, putative strong similarit... 153 1e-37
At1g13370.1 68414.m01554 histone H3, putative strong similarity ... 151 5e-37
At1g19890.1 68414.m02494 histone H3, putative similar to histone... 138 2e-33
At5g12910.1 68418.m01481 histone H3, putative similar to histone... 104 4e-23
At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12) si... 64 6e-11
At5g08300.1 68418.m00977 succinyl-CoA ligase [GDP-forming] alpha... 29 3.4
At3g46710.1 68416.m05071 disease resistance protein (CC-NBS-LRR ... 27 7.9
>At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2,
MINOR, Medicago sativa, SWISSPROT:P11105, histone H3
variant H3.3 Lycopersicon esculentum GI:1435157;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 162 bits (393), Expect = 2e-40
Identities = 77/82 (93%), Positives = 81/82 (98%)
Frame = +2
Query: 8 MARAKQTARKSTGGKAPRKQLATKAARESAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 187
MAR KQTARKSTGGKAPRKQLATKAAR+SAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 188 LLIRKLPFQRLVRQIAQDFKTD 253
LLIRKLPFQRLVR+IAQDFKTD
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTD 82
Score = 99.1 bits (236), Expect = 2e-21
Identities = 49/58 (84%), Positives = 52/58 (89%)
Frame = +1
Query: 241 FQN*LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVAIMPKHIQLARRIRGERA 414
F+ LRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRV IMPK IQLARRIRGERA
Sbjct: 79 FKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 162 bits (393), Expect = 2e-40
Identities = 77/82 (93%), Positives = 81/82 (98%)
Frame = +2
Query: 8 MARAKQTARKSTGGKAPRKQLATKAARESAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 187
MAR KQTARKSTGGKAPRKQLATKAAR+SAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 188 LLIRKLPFQRLVRQIAQDFKTD 253
LLIRKLPFQRLVR+IAQDFKTD
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTD 82
Score = 99.1 bits (236), Expect = 2e-21
Identities = 49/58 (84%), Positives = 52/58 (89%)
Frame = +1
Query: 241 FQN*LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVAIMPKHIQLARRIRGERA 414
F+ LRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRV IMPK IQLARRIRGERA
Sbjct: 79 FKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 162 bits (393), Expect = 2e-40
Identities = 77/82 (93%), Positives = 81/82 (98%)
Frame = +2
Query: 8 MARAKQTARKSTGGKAPRKQLATKAARESAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 187
MAR KQTARKSTGGKAPRKQLATKAAR+SAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 188 LLIRKLPFQRLVRQIAQDFKTD 253
LLIRKLPFQRLVR+IAQDFKTD
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTD 82
Score = 99.1 bits (236), Expect = 2e-21
Identities = 49/58 (84%), Positives = 52/58 (89%)
Frame = +1
Query: 241 FQN*LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVAIMPKHIQLARRIRGERA 414
F+ LRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRV IMPK IQLARRIRGERA
Sbjct: 79 FKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At5g65360.1 68418.m08221 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 160 bits (389), Expect = 6e-40
Identities = 76/82 (92%), Positives = 81/82 (98%)
Frame = +2
Query: 8 MARAKQTARKSTGGKAPRKQLATKAARESAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 187
MAR KQTARKSTGGKAPRKQLATKAAR+SAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 188 LLIRKLPFQRLVRQIAQDFKTD 253
LLIRKLPFQRLVR+IAQDFKTD
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTD 82
Score = 101 bits (243), Expect = 3e-22
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +1
Query: 241 FQN*LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVAIMPKHIQLARRIRGERA 414
F+ LRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRV IMPK IQLARRIRGERA
Sbjct: 79 FKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At5g10400.1 68418.m01206 histone H3 identical to several histone H3
proteins, including Zea mays SP|P05203, Medicago sativa
GI:166384, Encephalartos altensteinii SP|P08903, Pisum
sativum SP|P02300; contains Pfam profile PF00125 Core
histone H2A/H2B/H3/H4
Length = 136
Score = 160 bits (389), Expect = 6e-40
Identities = 76/82 (92%), Positives = 81/82 (98%)
Frame = +2
Query: 8 MARAKQTARKSTGGKAPRKQLATKAARESAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 187
MAR KQTARKSTGGKAPRKQLATKAAR+SAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 188 LLIRKLPFQRLVRQIAQDFKTD 253
LLIRKLPFQRLVR+IAQDFKTD
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTD 82
Score = 101 bits (243), Expect = 3e-22
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +1
Query: 241 FQN*LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVAIMPKHIQLARRIRGERA 414
F+ LRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRV IMPK IQLARRIRGERA
Sbjct: 79 FKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At5g10390.1 68418.m01205 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 160 bits (389), Expect = 6e-40
Identities = 76/82 (92%), Positives = 81/82 (98%)
Frame = +2
Query: 8 MARAKQTARKSTGGKAPRKQLATKAARESAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 187
MAR KQTARKSTGGKAPRKQLATKAAR+SAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 188 LLIRKLPFQRLVRQIAQDFKTD 253
LLIRKLPFQRLVR+IAQDFKTD
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTD 82
Score = 101 bits (243), Expect = 3e-22
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +1
Query: 241 FQN*LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVAIMPKHIQLARRIRGERA 414
F+ LRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRV IMPK IQLARRIRGERA
Sbjct: 79 FKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At3g27360.1 68416.m03421 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 160 bits (389), Expect = 6e-40
Identities = 76/82 (92%), Positives = 81/82 (98%)
Frame = +2
Query: 8 MARAKQTARKSTGGKAPRKQLATKAARESAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 187
MAR KQTARKSTGGKAPRKQLATKAAR+SAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 188 LLIRKLPFQRLVRQIAQDFKTD 253
LLIRKLPFQRLVR+IAQDFKTD
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTD 82
Score = 101 bits (243), Expect = 3e-22
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +1
Query: 241 FQN*LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVAIMPKHIQLARRIRGERA 414
F+ LRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRV IMPK IQLARRIRGERA
Sbjct: 79 FKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At1g09200.1 68414.m01027 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 160 bits (389), Expect = 6e-40
Identities = 76/82 (92%), Positives = 81/82 (98%)
Frame = +2
Query: 8 MARAKQTARKSTGGKAPRKQLATKAARESAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 187
MAR KQTARKSTGGKAPRKQLATKAAR+SAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 188 LLIRKLPFQRLVRQIAQDFKTD 253
LLIRKLPFQRLVR+IAQDFKTD
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTD 82
Score = 101 bits (243), Expect = 3e-22
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +1
Query: 241 FQN*LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVAIMPKHIQLARRIRGERA 414
F+ LRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRV IMPK IQLARRIRGERA
Sbjct: 79 FKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At5g65350.1 68418.m08220 histone H3 nearly identical to histone H3
from Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 139
Score = 153 bits (371), Expect = 9e-38
Identities = 72/82 (87%), Positives = 79/82 (96%)
Frame = +2
Query: 8 MARAKQTARKSTGGKAPRKQLATKAARESAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 187
MAR KQTAR STGGKAPRKQLA KAAR+SAP+TGGVKKPHR+RPGTVALR+IR+YQKSTE
Sbjct: 1 MARTKQTARISTGGKAPRKQLAPKAARQSAPATGGVKKPHRFRPGTVALRDIRKYQKSTE 60
Query: 188 LLIRKLPFQRLVRQIAQDFKTD 253
+LIRKLPFQRLVR+IAQDFKTD
Sbjct: 61 ILIRKLPFQRLVREIAQDFKTD 82
Score = 102 bits (244), Expect = 2e-22
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +1
Query: 241 FQN*LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVAIMPKHIQLARRIRGERA 414
F+ LRFQS+A+ ALQEA+EAYLVGLFEDTNLCAIHAKRV IMPK IQLARRIRGERA
Sbjct: 79 FKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKEIQLARRIRGERA 136
>At1g75600.1 68414.m08784 histone H3.2, putative strong similarity
to histone H3.2 SP|P11105 GI:417103 from Lolium
temulentum, histone H3.2 from Mus pahari GI:515005;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 153 bits (370), Expect = 1e-37
Identities = 73/82 (89%), Positives = 78/82 (95%)
Frame = +2
Query: 8 MARAKQTARKSTGGKAPRKQLATKAARESAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 187
MAR KQTARKS GGKAPR LATKAAR+SAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSHGGKAPRTLLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 188 LLIRKLPFQRLVRQIAQDFKTD 253
LLIRKLPFQRLVR+IAQD+KTD
Sbjct: 61 LLIRKLPFQRLVREIAQDYKTD 82
Score = 97.5 bits (232), Expect = 7e-21
Identities = 47/54 (87%), Positives = 50/54 (92%)
Frame = +1
Query: 253 LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVAIMPKHIQLARRIRGERA 414
LRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRV IMPK +QLARRIRGERA
Sbjct: 83 LRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
>At1g13370.1 68414.m01554 histone H3, putative strong similarity to
Histone H3.2, minor Medicago sativa SP|P11105, histone
H3 Rubus idaeus GI:10732809; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 151 bits (365), Expect = 5e-37
Identities = 72/82 (87%), Positives = 78/82 (95%)
Frame = +2
Query: 8 MARAKQTARKSTGGKAPRKQLATKAARESAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 187
MAR KQ+ARKS GGKAP KQLATKAAR+SAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQSARKSHGGKAPTKQLATKAARKSAPTTGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 188 LLIRKLPFQRLVRQIAQDFKTD 253
LL RKLPFQRLVR+IAQDFKTD
Sbjct: 61 LLNRKLPFQRLVREIAQDFKTD 82
Score = 96.3 bits (229), Expect = 2e-20
Identities = 47/58 (81%), Positives = 51/58 (87%)
Frame = +1
Query: 241 FQN*LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVAIMPKHIQLARRIRGERA 414
F+ LRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRV IMPK +QLARRIR ERA
Sbjct: 79 FKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRAERA 136
>At1g19890.1 68414.m02494 histone H3, putative similar to histone H3
from Chlamydomonas reinhardtii GI:571470, Volvox carteri
SP|P08437, histone H3.2 minor from Lolium temulentum
SP|P11105; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 137
Score = 138 bits (335), Expect = 2e-33
Identities = 67/83 (80%), Positives = 75/83 (90%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 MARAKQTARKSTGGKAPRKQLATKAARESA-PSTGGVKKPHRYRPGTVALREIRRYQKST 184
MAR KQTARKSTGGK PRK+LATKAAR++ P GGVK+ HR+RPGTVALREIR+YQKST
Sbjct: 1 MARTKQTARKSTGGKGPRKELATKAARKTRRPYRGGVKRAHRFRPGTVALREIRKYQKST 60
Query: 185 ELLIRKLPFQRLVRQIAQDFKTD 253
+LLIRKLPFQRLVR+IAQDFK D
Sbjct: 61 DLLIRKLPFQRLVREIAQDFKVD 83
Score = 94.7 bits (225), Expect = 5e-20
Identities = 47/54 (87%), Positives = 49/54 (90%)
Frame = +1
Query: 253 LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVAIMPKHIQLARRIRGERA 414
LRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRV IM K IQLARRIRGERA
Sbjct: 84 LRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMSKDIQLARRIRGERA 137
>At5g12910.1 68418.m01481 histone H3, putative similar to histone H3
from Mus musculus GI:51301, Gallus gallus GI:211859,
Medicago sativa GI:166384, Pisum sativum SP|P02300;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 131
Score = 104 bits (250), Expect = 4e-23
Identities = 52/82 (63%), Positives = 65/82 (79%)
Frame = +2
Query: 8 MARAKQTARKSTGGKAPRKQLATKAARESAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 187
MAR+ QTARK+TGGKAP A + + S P +KKP+RY+PGTVALREIR+YQK+T+
Sbjct: 1 MARSNQTARKATGGKAPH--FAMRVWQHSTPP---LKKPYRYKPGTVALREIRKYQKTTD 55
Query: 188 LLIRKLPFQRLVRQIAQDFKTD 253
L+IRKLPFQRLV++IAQ K D
Sbjct: 56 LVIRKLPFQRLVKEIAQSLKAD 77
Score = 87.4 bits (207), Expect = 7e-18
Identities = 38/53 (71%), Positives = 48/53 (90%)
Frame = +1
Query: 253 LRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVAIMPKHIQLARRIRGER 411
LRFQ+ A+ ALQEA+EA++VG+FEDTNLCA+HAKR IMPK IQLA+R+RG+R
Sbjct: 78 LRFQTGAVSALQEAAEAFMVGMFEDTNLCAMHAKRSTIMPKDIQLAKRLRGDR 130
>At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12)
similar to histone H3 GB:X17141 GI:10795 from
Tetrahymena pyriformis, GI:161790 from Tetrahymena
thermophila; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 178
Score = 64.5 bits (150), Expect = 6e-11
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +1
Query: 256 RFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVAIMPKHIQLARRIRGE 408
R+ + A+ ALQEA+E YLVGLF D+ LCAIHA+RV +M K +LARR+ G+
Sbjct: 124 RWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLMRKDFELARRLGGK 174
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/64 (48%), Positives = 38/64 (59%)
Frame = +2
Query: 41 TGGKAPRKQLATKAARESAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRL 220
T A + K +R++ P G KK +RYRPGTVAL+EIR +QK T LLI F R
Sbjct: 51 TTSPATGTRRGAKRSRQAMPR-GSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIRE 109
Query: 221 VRQI 232
VR I
Sbjct: 110 VRSI 113
>At5g08300.1 68418.m00977 succinyl-CoA ligase [GDP-forming]
alpha-chain, mitochondrial, putative / succinyl-CoA
synthetase, alpha chain, putative / SCS-alpha, putative
identical to SP|P53586 Succinyl-CoA ligase [GDP-forming]
alpha-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, alpha chain) (SCS-alpha)
{Arabidopsis thaliana}; strong similarity to SP|P13086
Succinyl-CoA ligase [GDP-forming] alpha-chain,
mitochondrial precursor {Rattus norvegicus}; contains
Pfam profiles PF00549: CoA-ligase, PF02629: CoA binding
domain
Length = 347
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 281 LSRRQARLISLACSKTPTCVLFTPNVWPSCRSI 379
+SR+ ARLI SK C V+PSC+S+
Sbjct: 1 MSRQVARLIGSLSSKARRCSTGGSEVFPSCQSL 33
>At3g46710.1 68416.m05071 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 847
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = -2
Query: 280 LRWRQTGNAI--SFEILSDLSHKTLERQLTDKQLSRLLI 170
LR+ QT +A SFE ++DLS+ T R LT + + LLI
Sbjct: 610 LRFLQTLDASGNSFERMTDLSNLTSLRHLTGRFIGELLI 648
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,169,637
Number of Sequences: 28952
Number of extensions: 247856
Number of successful extensions: 628
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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