Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30485
(624 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 109 5e-23
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 108 1e-22
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 103 5e-21
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 100 3e-20
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 99 4e-20
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 97 3e-19
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 96 5e-19
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 94 2e-18
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 92 9e-18
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 84 2e-15
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 83 5e-15
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 83 5e-15
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 82 9e-15
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 75 2e-12
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 69 7e-11
UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1; Encepha... 52 1e-05
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 46 6e-04
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 46 6e-04
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 42 0.012
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 38 0.20
UniRef50_Q580C7 Cluster: Putative uncharacterized protein; n=1; ... 35 1.4
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 35 1.4
UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 34 2.4
UniRef50_Q6ZRL6 Cluster: CDNA FLJ46261 fis, clone TESTI4025062; ... 34 3.2
UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering ... 33 4.2
UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.2
UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,... 33 5.6
UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome s... 33 7.3
UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putativ... 32 9.7
UniRef50_A1HGL3 Cluster: Putative uncharacterized protein; n=2; ... 32 9.7
UniRef50_Q4UCQ7 Cluster: Putative uncharacterized protein; n=2; ... 32 9.7
UniRef50_Q5AZL8 Cluster: Putative uncharacterized protein; n=1; ... 32 9.7
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 109 bits (262), Expect = 5e-23
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = +1
Query: 256 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 435
+EG I VVVG VT+D+R+Y +P + V AL TE ARARI AGGE LTFDQLALR P
Sbjct: 71 KEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPL-T 129
Query: 436 KTVLVQGQRNAREAVRHFGPAPG 504
TVL++G +NAREAV+HFGPAPG
Sbjct: 130 DTVLLRGPKNAREAVKHFGPAPG 152
Score = 58.4 bits (135), Expect = 1e-07
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +2
Query: 62 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 241
++K +RT KS DI T++ FN ++L+RLFMS++NRPP+S+SRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 242 MK 247
M+
Sbjct: 68 MQ 69
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 108 bits (259), Expect = 1e-22
Identities = 52/83 (62%), Positives = 63/83 (75%)
Frame = +1
Query: 256 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 435
RE AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G
Sbjct: 75 RENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGC 134
Query: 436 KTVLVQGQRNAREAVRHFGPAPG 504
TVL+ G R RE RHFG APG
Sbjct: 135 GTVLLSGPRKGREVYRHFGKAPG 157
Score = 85.4 bits (202), Expect = 1e-15
Identities = 41/73 (56%), Positives = 48/73 (65%)
Frame = +2
Query: 35 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 214
MG+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 215 ISVSRLARHMKKP 253
+S+SR+ R MK P
Sbjct: 61 LSLSRMIRKMKLP 73
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 103 bits (246), Expect = 5e-21
Identities = 47/76 (61%), Positives = 61/76 (80%)
Frame = +1
Query: 274 VVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 453
VVVGTVT+D R+++ PK TVAAL T ARA+I+ AGGE +T DQLA+RAP G+ T++++
Sbjct: 82 VVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILR 141
Query: 454 GQRNAREAVRHFGPAP 501
G RN+REAVRHFG P
Sbjct: 142 GPRNSREAVRHFGMGP 157
Score = 61.7 bits (143), Expect = 1e-08
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +2
Query: 35 MGIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRP 211
MGID K H R RT KS ++ T+A FN++VL+ LF+S+INRP
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 212 PISVSRLARHMKK 250
P+SVSR+AR +K+
Sbjct: 61 PVSVSRIARALKQ 73
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 100 bits (239), Expect = 3e-20
Identities = 47/73 (64%), Positives = 58/73 (79%)
Frame = +1
Query: 271 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 450
AVVVGTVTND R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+PTG + L+
Sbjct: 79 AVVVGTVTNDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLL 138
Query: 451 QGQRNAREAVRHF 489
+G AREAV+HF
Sbjct: 139 RGATKAREAVKHF 151
Score = 39.9 bits (89), Expect = 0.048
Identities = 16/34 (47%), Positives = 27/34 (79%)
Frame = +2
Query: 149 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKK 250
T+ FN++VL+RL M R + P+S+S+L++HM+K
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK 73
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 99 bits (238), Expect = 4e-20
Identities = 48/85 (56%), Positives = 60/85 (70%)
Frame = +1
Query: 250 ANREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPT 429
+N + +AVVVG++T+D RL+ M V AL TE AR RI+ AGGE LTFDQLALR PT
Sbjct: 128 SNNQNSVAVVVGSITDDKRLFSCRNMKVCALRFTETARKRIVDAGGECLTFDQLALRYPT 187
Query: 430 GKKTVLVQGQRNAREAVRHFGPAPG 504
GK +L++G AR A +HFG APG
Sbjct: 188 GKDCILLRGPTKARTAEKHFGSAPG 212
Score = 41.9 bits (94), Expect = 0.012
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 23 LVVKMGIDI-NHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSR 199
+++ MGID+ N +K R + S++ T+ FN+I+ +RL M +
Sbjct: 53 ILINMGIDLKNVGRIKKHGRKNLVSKNPYLRLLVKLYRFLARRTDVNFNKIIAKRLIMPK 112
Query: 200 INRPPISVSRLARHM 244
RPP+S+S+L +HM
Sbjct: 113 RFRPPLSLSKLQQHM 127
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 97.1 bits (231), Expect = 3e-19
Identities = 48/84 (57%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Frame = +1
Query: 268 IAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVL 447
IAVVVG V +DVR+ +IP M V AL ++ AR I+AAGGE LTFDQLA+ APTGK T L
Sbjct: 86 IAVVVGDVLDDVRMARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYL 145
Query: 448 VQGQRNAREAVRHFGPA--PGARA 513
++G+++ RE+VRHFG + PG+ +
Sbjct: 146 LRGRKSGRESVRHFGASGVPGSHS 169
Score = 39.9 bits (89), Expect = 0.048
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 149 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPIV 259
T++ FN++V +RL SR NR PIS+SR+A MK+ V
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAV 76
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 96.3 bits (229), Expect = 5e-19
Identities = 44/76 (57%), Positives = 61/76 (80%)
Frame = +1
Query: 256 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 435
REG AVVVG +T+DVR++K+PK+ + AL VT +ARARI+ AGGEI+TFDQLAL++P G+
Sbjct: 45 REGKTAVVVGCITDDVRIHKLPKLKICALRVTARARARIIKAGGEIITFDQLALQSPKGQ 104
Query: 436 KTVLVQGQRNAREAVR 483
TVL+QG ++ + R
Sbjct: 105 NTVLMQGFKSETDMER 120
Score = 46.8 bits (106), Expect = 4e-04
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +2
Query: 149 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKK 250
TNAKFN IVL+RLFMSR N+ +S++R+ R M K
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNK 42
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 94.3 bits (224), Expect = 2e-18
Identities = 47/77 (61%), Positives = 58/77 (75%)
Frame = +1
Query: 274 VVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 453
VVVGTVT+D RL +PK+ V AL TE AR RILAAGG+ LTFDQLA + PTG T+L++
Sbjct: 297 VVVGTVTDDARLLTVPKLNVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLR 356
Query: 454 GQRNAREAVRHFGPAPG 504
G + REA++HFG A G
Sbjct: 357 GPK-VREALKHFGRAAG 372
Score = 35.9 bits (79), Expect = 0.79
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 23 LVVKMGIDINHKH--DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMS 196
L ++ G+D K R V R +V S ++ T+++FN VLRRL +
Sbjct: 212 LSIQQGVDAYKKTRVQRNVGR-KVTSTNLYLKLLIKLYKFLARRTDSQFNATVLRRLQST 270
Query: 197 RINRPPISVSRLARHM 244
R R PISVSRL + +
Sbjct: 271 RTARYPISVSRLVKQI 286
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 92.3 bits (219), Expect = 9e-18
Identities = 45/74 (60%), Positives = 56/74 (75%)
Frame = +1
Query: 271 AVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 450
AV V TVT D R Y +PKM V AL T+ A A I AGG+ L FD+LAL+APTG+KTVL+
Sbjct: 78 AVCVNTVTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKCLRFDELALKAPTGRKTVLI 136
Query: 451 QGQRNAREAVRHFG 492
+G+RN REA++HFG
Sbjct: 137 RGKRNVREALKHFG 150
Score = 43.6 bits (98), Expect = 0.004
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +2
Query: 35 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 214
M ID++ H RK + + T +KF + +L RL +SR+NRP
Sbjct: 1 MAIDLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPI 60
Query: 215 ISVSRLARHMKK 250
+S S+LA MKK
Sbjct: 61 VSTSKLACLMKK 72
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 84.2 bits (199), Expect = 2e-15
Identities = 46/77 (59%), Positives = 56/77 (72%)
Frame = +1
Query: 274 VVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 453
VVVGTVT+DVRL +PK+ V TE AR RILAAGG+ LTFDQLA + PTG T+L++
Sbjct: 377 VVVGTVTDDVRLLTVPKIKV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLR 432
Query: 454 GQRNAREAVRHFGPAPG 504
G R RE ++HFG A G
Sbjct: 433 GPR-VREELKHFGRAAG 448
Score = 34.7 bits (76), Expect = 1.8
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 149 TNAKFNQIVLRRLFMSRINRPPISVSRLARHM 244
T++ FN VLRRL +R R PISVSRL + +
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQI 366
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 83.0 bits (196), Expect = 5e-15
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = +1
Query: 295 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 474
+D R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+P G K L++G+ ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 475 AVRHF 489
AV+HF
Sbjct: 185 AVKHF 189
Score = 38.3 bits (85), Expect = 0.15
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = +2
Query: 149 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMK 247
T+ FN+IVL+RL M R + P+S+S+L++HM+
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME 72
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 83.0 bits (196), Expect = 5e-15
Identities = 43/88 (48%), Positives = 55/88 (62%)
Frame = +1
Query: 241 HEEANREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 420
H RE IAVV TVTND RL IP+MT+ AL + AR+RI AGG ++FD+L
Sbjct: 69 HLMHKREDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGRCMSFDELLAE 128
Query: 421 APTGKKTVLVQGQRNAREAVRHFGPAPG 504
PTG VL+QG+R+ R + FG +PG
Sbjct: 129 KPTGDNCVLLQGRRSCRAVCKKFG-SPG 155
Score = 42.7 bits (96), Expect = 0.007
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 35 MGIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRP 211
MGID+ RKV R E KS + T F +++ +RL +S+ NRP
Sbjct: 1 MGIDLKTGIKKRKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRP 60
Query: 212 PISVSRLARHMKK 250
+SVSRLA M K
Sbjct: 61 VLSVSRLAHLMHK 73
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 82.2 bits (194), Expect = 9e-15
Identities = 42/83 (50%), Positives = 55/83 (66%)
Frame = +1
Query: 256 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 435
+E AVVVGT+T+DV + ++PK+ V AL VT +AR+ I+ GG+ LTFDQLAL +P
Sbjct: 111 QENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRVGGKNLTFDQLALDSPKVC 170
Query: 436 KTVLVQGQRNAREAVRHFGPAPG 504
TVL+ G R RE HF A G
Sbjct: 171 STVLLSGPRKGREVYWHFDKALG 193
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = +2
Query: 35 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 214
+G+DI H DRKVRR E KSQDI TN+ FN++VL+RLFMSR NRPP
Sbjct: 110 LGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPP 169
Query: 215 ISVSRL 232
+++SR+
Sbjct: 170 LALSRM 175
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 69.3 bits (162), Expect = 7e-11
Identities = 34/69 (49%), Positives = 49/69 (71%)
Frame = +1
Query: 259 EGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKK 438
E A V+GTVT+++R+ +PK+ V+AL VT AR+RIL A G+IL+FDQLA+ +P G +
Sbjct: 64 ENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANGKILSFDQLAMTSPKGPQ 123
Query: 439 TVLVQGQRN 465
QG R+
Sbjct: 124 K-CYQGYRH 131
>UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L18
- Encephalitozoon cuniculi
Length = 200
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/87 (34%), Positives = 44/87 (50%)
Frame = +1
Query: 268 IAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVL 447
+AVVV V +D + IP + V AL ++ + +I GG I T DQL P L
Sbjct: 82 VAVVVAKVLDDDEVMVIPAVKVVALQWSKGVKEKIERYGGTIGTLDQLFELCPNMDDICL 141
Query: 448 VQGQRNAREAVRHFGPAPGARALTLNP 528
V + +R + + +GPAPG + T P
Sbjct: 142 VSTNKFSRRSAKFWGPAPGEKGSTTYP 168
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 46.4 bits (105), Expect = 6e-04
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +2
Query: 35 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 214
+G+ ++ K +K + T KS DI T +KFN + L+R FMS++N+ P
Sbjct: 3 IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61
Query: 215 ISVSRLARHM 244
+ +SRL R M
Sbjct: 62 LLLSRLVRFM 71
Score = 35.9 bits (79), Expect = 0.79
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +1
Query: 256 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 372
++G I VV+G+VT+D+R+Y++ + V L T++ R I
Sbjct: 74 KKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 46.4 bits (105), Expect = 6e-04
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +2
Query: 35 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 214
+G+ ++ K +K + T KS DI T +KFN + L+R FMS++N+ P
Sbjct: 3 IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61
Query: 215 ISVSRLARHM 244
+ +SRL R M
Sbjct: 62 LLLSRLVRFM 71
Score = 35.9 bits (79), Expect = 0.79
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +1
Query: 256 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 372
++G I VV+G+VT+D+R+Y++ + V L T++ R I
Sbjct: 74 KKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 41.9 bits (94), Expect = 0.012
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 256 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 435
+EG + VV G + +L K K+ VAA+ ++ KA +++ AGGE+LT +L + P G
Sbjct: 59 KEGDVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRKYPRGS 116
Query: 436 KTVLV 450
+V
Sbjct: 117 GVRIV 121
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 37.9 bits (84), Expect = 0.20
Identities = 15/63 (23%), Positives = 35/63 (55%)
Frame = +1
Query: 274 VVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 453
+ V + ND R+ K PK+ + AL+ + + +I+ GG+I +++ + K + ++
Sbjct: 104 LTVSKILNDERISKTPKLKIFALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIR 163
Query: 454 GQR 462
G++
Sbjct: 164 GKK 166
>UniRef50_Q580C7 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 350
Score = 35.1 bits (77), Expect = 1.4
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +1
Query: 139 GQTYKCQIQSDRSTPALYEPYQPATNLCVSFGAPHEEANREGLIAVVVGTVTNDVRLYKI 318
G ++CQ++ R +P++ +T+ CVS + G+ ++T + +
Sbjct: 223 GMLHRCQVKRTRVSPSVLHKSPTSTSGCVSSSIQMDSTGSCGVSVGREQSITTQLLPSDV 282
Query: 319 PKMTVAALHVTEKARARILA 378
++ VAA + E+ RAR LA
Sbjct: 283 WEVCVAAKNAEEEVRARALA 302
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 35.1 bits (77), Expect = 1.4
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +1
Query: 256 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 435
+EG + VV G V + K+T+ ++ A ++L++GG + F +L PTGK
Sbjct: 63 KEGDVVVVPGRVLGTGSMPH--KITLCPFGISGAAAEKVLSSGGRVTGFAELTKEFPTGK 120
Query: 436 KTVLV 450
VL+
Sbjct: 121 GVVLL 125
>UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 306
Score = 34.7 bits (76), Expect = 1.8
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -3
Query: 289 LSPLPRQSNPHDWLLHVA--RQTRHRDWWPVDTAHKEP 182
+ P R +P+ L + RQ+ DWWP D HKEP
Sbjct: 159 IEPKKRAKHPYKGLKRLKGDRQSTKPDWWPSDVPHKEP 196
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 34.3 bits (75), Expect = 2.4
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Frame = +1
Query: 259 EGLIAVVVGTVTNDVRLYKIPKMTVAALHVT---EKARARILAAGGEILTFDQLALRAPT 429
E AVVVG VT+DVR+ ++ ++ V AL + E +R+ ++ L+L
Sbjct: 11 ENKTAVVVGMVTDDVRILEVHRLKVCALRGSTGPEVGSSRLRVRSSPSTSW-PLSLPRDE 69
Query: 430 GKKTVLVQGQRNAREAVRHFGPAPGARALTLNPMFAPR 543
+ LV G R T NPMF PR
Sbjct: 70 APSSFLVLG--TVERCTDTLARPQELRTATPNPMFVPR 105
>UniRef50_Q6ZRL6 Cluster: CDNA FLJ46261 fis, clone TESTI4025062;
n=2; Homo sapiens|Rep: CDNA FLJ46261 fis, clone
TESTI4025062 - Homo sapiens (Human)
Length = 280
Score = 33.9 bits (74), Expect = 3.2
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Frame = +3
Query: 270 CRGSGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF*SAGSSCSDWQEDSTG 449
CR SG S R CS +S T CW + F +SCS W ++
Sbjct: 30 CRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSF----TSCSCWSSGTSS 85
Query: 450 T----RSAKCS*GSASLWPCSRSTRS 515
T RS+ S S S W S+ S
Sbjct: 86 TPCSCRSSGTSSTSCSCWSSGTSSTS 111
>UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering
factor SEC34; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to tethering factor SEC34 -
Strongylocentrotus purpuratus
Length = 781
Score = 33.5 bits (73), Expect = 4.2
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = -1
Query: 495 RAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRY 316
+A+ CL+ +LTL + + + +Q + K+ +S+S+NA T F+G +S+ ++
Sbjct: 198 QARFKQCLSK-ALTLIKAAVFTILNGATQQVVPKDVTSTSENAFTLFYGKFRSNAPKIKA 256
Query: 315 LVQ 307
L++
Sbjct: 257 LME 259
>UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 123
Score = 33.5 bits (73), Expect = 4.2
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = -2
Query: 389 SPPAAKMRARAFSVT*RAATVIFGILYSLTSFVTVPTTTAI 267
SPP K+ + A +V +AA V FG + S VTVPTTT +
Sbjct: 3 SPPFFKISSLAPAVNLKAAIVAFGNSNNSLSSVTVPTTTMV 43
>UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG4917-PA, isoform A - Tribolium castaneum
Length = 838
Score = 33.1 bits (72), Expect = 5.6
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 392 FLLLISWLFVLRLARRQYWYKVSEMLVRQCVTLALLQ 502
FL + L ++++A RQ W +ML+ CVTL+ LQ
Sbjct: 455 FLYMFIPLLLVKIASRQDWKGTYQMLIPHCVTLSWLQ 491
>UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 19
SCAF15045, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 598
Score = 32.7 bits (71), Expect = 7.3
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 501 WSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQ 373
W K T +I+LT Q+CLL R+T + NF+ SS+
Sbjct: 73 WKYFKYTMAPYTIALTPEQHCLLGLRNTGEHFCSTSNFARSSK 115
>UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putative;
n=1; Clostridium perfringens SM101|Rep:
CRISPR-associated protein Csx8, putative - Clostridium
perfringens (strain SM101 / Type A)
Length = 447
Score = 32.3 bits (70), Expect = 9.7
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -1
Query: 411 QLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQ 307
+L KS +F +S+N T+ FGNMK S ++ + V+
Sbjct: 220 ELKKSNSFIENSENTRTTLFGNMKESAEYIGFDVE 254
>UniRef50_A1HGL3 Cluster: Putative uncharacterized protein; n=2;
Ralstonia pickettii|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 435
Score = 32.3 bits (70), Expect = 9.7
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 136 LGQTY-KCQIQSDRSTPALYE-PYQPATNLCVSFGAPHEEANR 258
+G+T + Q + R AL E P+Q N V FG PH EA R
Sbjct: 237 VGRTVGEIQFKISRKVSALEEEPHQDLVNTVVKFGVPHSEAKR 279
>UniRef50_Q4UCQ7 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 1007
Score = 32.3 bits (70), Expect = 9.7
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = -1
Query: 483 THCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYL 313
+HC + I LT Q CL S S L +F +SS F N + +R+ YL
Sbjct: 598 SHCCSKIPLTTLQECLEKSSSYGEALTDLNSFPNSSTIHLAFIFKNFLNVNRYKYYL 654
>UniRef50_Q5AZL8 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 451
Score = 32.3 bits (70), Expect = 9.7
Identities = 28/99 (28%), Positives = 38/99 (38%)
Frame = -2
Query: 524 FSVRARAPGAGPK*RTASRAFR*PCTSTVFLPVGARRAS*SKVRISPPAAKMRARAFSVT 345
F++ A P G ASR P+ A++A I PP A +T
Sbjct: 177 FAIPATGPATGESPNLASRTEALNIADNQTTPLQAQQAQDQSSDIQPPIPNDNAGKLEIT 236
Query: 344 *RAATVIFGILYSLTSFVTVPTTTAIKPSRLASSCGAPN 228
A I + SLTS VP TA PS ++ P+
Sbjct: 237 TDAIPEIPVLPQSLTSATAVP--TAEPPSTTTTTSSTPS 273
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,997,920
Number of Sequences: 1657284
Number of extensions: 13751237
Number of successful extensions: 38337
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 36853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38308
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -