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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30485
         (624 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11566-1|AAA16329.1|  188|Homo sapiens ribosomal protein L18 pro...   108   2e-23
DQ403032-1|ABD77165.1|  164|Homo sapiens ribosomal protein L18 p...   108   2e-23
BC021743-1|AAH21743.1|  188|Homo sapiens ribosomal protein L18 p...   108   2e-23
BC009708-1|AAH09708.1|  188|Homo sapiens ribosomal protein L18 p...   108   2e-23
BC000374-1|AAH00374.1|  188|Homo sapiens ribosomal protein L18 p...   108   2e-23
AB061825-1|BAB79463.1|  188|Homo sapiens ribosomal protein L18 p...   108   2e-23
AK128140-1|BAC87294.1|  280|Homo sapiens protein ( Homo sapiens ...    34   0.47 
AK125824-1|BAC86307.1|  280|Homo sapiens protein ( Homo sapiens ...    34   0.47 

>L11566-1|AAA16329.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  108 bits (259), Expect = 2e-23
 Identities = 52/83 (62%), Positives = 63/83 (75%)
 Frame = +1

Query: 256 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 435
           RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G 
Sbjct: 75  RENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGC 134

Query: 436 KTVLVQGQRNAREAVRHFGPAPG 504
            TVL+ G R  RE  RHFG APG
Sbjct: 135 GTVLLSGPRKGREVYRHFGKAPG 157



 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 41/73 (56%), Positives = 48/73 (65%)
 Frame = +2

Query: 35  MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 214
           MG+DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60

Query: 215 ISVSRLARHMKKP 253
           +S+SR+ R MK P
Sbjct: 61  LSLSRMIRKMKLP 73



 Score = 29.9 bits (64), Expect = 7.6
 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
 Frame = +3

Query: 513 SHTKPYVRTKGH--EKARPSRRAN 578
           SHTKPYVR+KG   E+AR  RRA+
Sbjct: 161 SHTKPYVRSKGRKFERAR-GRRAS 183


>DQ403032-1|ABD77165.1|  164|Homo sapiens ribosomal protein L18
           protein.
          Length = 164

 Score =  108 bits (259), Expect = 2e-23
 Identities = 52/83 (62%), Positives = 63/83 (75%)
 Frame = +1

Query: 256 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 435
           RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G 
Sbjct: 52  RENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGC 111

Query: 436 KTVLVQGQRNAREAVRHFGPAPG 504
            TVL+ G R  RE  RHFG APG
Sbjct: 112 GTVLLSGPRKGREVYRHFGKAPG 134



 Score = 56.4 bits (130), Expect = 8e-08
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = +2

Query: 149 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKP 253
           TN+ FNQ+VL+RLFMSR NRPP+S+SR+ R MK P
Sbjct: 16  TNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLP 50



 Score = 29.9 bits (64), Expect = 7.6
 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
 Frame = +3

Query: 513 SHTKPYVRTKGH--EKARPSRRAN 578
           SHTKPYVR+KG   E+AR  RRA+
Sbjct: 138 SHTKPYVRSKGRKFERAR-GRRAS 160


>BC021743-1|AAH21743.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  108 bits (259), Expect = 2e-23
 Identities = 52/83 (62%), Positives = 63/83 (75%)
 Frame = +1

Query: 256 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 435
           RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G 
Sbjct: 75  RENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGC 134

Query: 436 KTVLVQGQRNAREAVRHFGPAPG 504
            TVL+ G R  RE  RHFG APG
Sbjct: 135 GTVLLSGPRKGREVYRHFGKAPG 157



 Score = 83.4 bits (197), Expect = 6e-16
 Identities = 40/73 (54%), Positives = 47/73 (64%)
 Frame = +2

Query: 35  MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 214
           MG+DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60

Query: 215 ISVSRLARHMKKP 253
           + +SR+ R MK P
Sbjct: 61  LCLSRMIRKMKLP 73



 Score = 29.9 bits (64), Expect = 7.6
 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
 Frame = +3

Query: 513 SHTKPYVRTKGH--EKARPSRRAN 578
           SHTKPYVR+KG   E+AR  RRA+
Sbjct: 161 SHTKPYVRSKGRKFERAR-GRRAS 183


>BC009708-1|AAH09708.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  108 bits (259), Expect = 2e-23
 Identities = 52/83 (62%), Positives = 63/83 (75%)
 Frame = +1

Query: 256 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 435
           RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G 
Sbjct: 75  RENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGC 134

Query: 436 KTVLVQGQRNAREAVRHFGPAPG 504
            TVL+ G R  RE  RHFG APG
Sbjct: 135 GTVLLSGPRKGREVYRHFGKAPG 157



 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 41/73 (56%), Positives = 48/73 (65%)
 Frame = +2

Query: 35  MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 214
           MG+DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60

Query: 215 ISVSRLARHMKKP 253
           +S+SR+ R MK P
Sbjct: 61  LSLSRMIRKMKLP 73



 Score = 29.9 bits (64), Expect = 7.6
 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
 Frame = +3

Query: 513 SHTKPYVRTKGH--EKARPSRRAN 578
           SHTKPYVR+KG   E+AR  RRA+
Sbjct: 161 SHTKPYVRSKGRKFERAR-GRRAS 183


>BC000374-1|AAH00374.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  108 bits (259), Expect = 2e-23
 Identities = 52/83 (62%), Positives = 63/83 (75%)
 Frame = +1

Query: 256 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 435
           RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G 
Sbjct: 75  RENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGC 134

Query: 436 KTVLVQGQRNAREAVRHFGPAPG 504
            TVL+ G R  RE  RHFG APG
Sbjct: 135 GTVLLSGPRKGREVYRHFGKAPG 157



 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 41/73 (56%), Positives = 48/73 (65%)
 Frame = +2

Query: 35  MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 214
           MG+DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60

Query: 215 ISVSRLARHMKKP 253
           +S+SR+ R MK P
Sbjct: 61  LSLSRMIRKMKLP 73



 Score = 29.9 bits (64), Expect = 7.6
 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
 Frame = +3

Query: 513 SHTKPYVRTKGH--EKARPSRRAN 578
           SHTKPYVR+KG   E+AR  RRA+
Sbjct: 161 SHTKPYVRSKGRKFERAR-GRRAS 183


>AB061825-1|BAB79463.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  108 bits (259), Expect = 2e-23
 Identities = 52/83 (62%), Positives = 63/83 (75%)
 Frame = +1

Query: 256 REGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 435
           RE   AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G 
Sbjct: 75  RENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGC 134

Query: 436 KTVLVQGQRNAREAVRHFGPAPG 504
            TVL+ G R  RE  RHFG APG
Sbjct: 135 GTVLLSGPRKGREVYRHFGKAPG 157



 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 41/73 (56%), Positives = 48/73 (65%)
 Frame = +2

Query: 35  MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 214
           MG+DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60

Query: 215 ISVSRLARHMKKP 253
           +S+SR+ R MK P
Sbjct: 61  LSLSRMIRKMKLP 73



 Score = 29.9 bits (64), Expect = 7.6
 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
 Frame = +3

Query: 513 SHTKPYVRTKGH--EKARPSRRAN 578
           SHTKPYVR+KG   E+AR  RRA+
Sbjct: 161 SHTKPYVRSKGRKFERAR-GRRAS 183


>AK128140-1|BAC87294.1|  280|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46261 fis, clone TESTI4025062. ).
          Length = 280

 Score = 33.9 bits (74), Expect = 0.47
 Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
 Frame = +3

Query: 270 CRGSGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF*SAGSSCSDWQEDSTG 449
           CR SG S   R           CS     +S T   CW   + F    +SCS W   ++ 
Sbjct: 30  CRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSF----TSCSCWSSGTSS 85

Query: 450 T----RSAKCS*GSASLWPCSRSTRS 515
           T    RS+  S  S S W    S+ S
Sbjct: 86  TPCSCRSSGTSSTSCSCWSSGTSSTS 111


>AK125824-1|BAC86307.1|  280|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43836 fis, clone TESTI4005857. ).
          Length = 280

 Score = 33.9 bits (74), Expect = 0.47
 Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
 Frame = +3

Query: 270 CRGSGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF*SAGSSCSDWQEDSTG 449
           CR SG S   R           CS     +S T   CW   + F    +SCS W   ++ 
Sbjct: 30  CRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSF----TSCSCWSSGTSS 85

Query: 450 T----RSAKCS*GSASLWPCSRSTRS 515
           T    RS+  S  S S W    S+ S
Sbjct: 86  TPCSCRSSGTSSTSCSCWSSGTSSTS 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,004,014
Number of Sequences: 237096
Number of extensions: 2238769
Number of successful extensions: 4865
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4862
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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