Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30480
(780 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 110 2e-25
SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces pom... 46 6e-06
SPBC3F6.03 |trr1|caf4|thioredoxin reductase Trr1|Schizosaccharom... 31 0.24
SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyc... 30 0.32
SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|... 28 1.3
SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi... 28 1.3
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.3
SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces p... 27 2.3
SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolo... 27 2.3
SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl modifica... 27 3.0
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 27 3.0
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 4.0
SPBC26H8.01 |thi2|nmt2|thiazole biosynthetic enzyme|Schizosaccha... 27 4.0
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 27 4.0
SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase Gut2|Schi... 26 5.3
SPBC776.03 |||homoserine dehydrogenase |Schizosaccharomyces pomb... 26 5.3
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 25 9.2
>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
Dld1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 110 bits (264), Expect = 2e-25
Identities = 51/86 (59%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Frame = +3
Query: 513 PNKVEVHGEKGV--ETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKML 686
P + V G G +T+ KN +IA+GSEV PFPGVT DEK+I++STGALSL VPKKM
Sbjct: 162 PQTLSVKGIDGAADQTIKAKNFIIATGSEVKPFPGVTIDEKKIVSSTGALSLSEVPKKMT 221
Query: 687 VIGAGVIGLELGSVYQRLGADVTAID 764
V+G G+IGLE+GSV+ RLGA+VT ++
Sbjct: 222 VLGGGIIGLEMGSVWSRLGAEVTVVE 247
Score = 109 bits (261), Expect = 6e-25
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 KDPTLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIVTGEVTFDFKKMMXYKANAVK 435
K TLGGTCLNVGCIPSKALL+NSH+YH KHD K+RGI V+ + +MM K ++VK
Sbjct: 76 KRGTLGGTCLNVGCIPSKALLNNSHIYHTVKHDTKRRGIDVSGVSVNLSQMMKAKDDSVK 135
Query: 436 GLTGGIAMLFQKNKVNLVKGVGTIV-PQ 516
LT GI LF+KNKV KG G+ + PQ
Sbjct: 136 SLTSGIEYLFKKNKVEYAKGTGSFIDPQ 163
Score = 49.6 bits (113), Expect = 5e-07
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +2
Query: 131 RIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 259
R+ + + + + DL VIG GPGGYVAAI+ AQLG+K + VE+
Sbjct: 34 RLYSAKASGNGEYDLCVIGGGPGGYVAAIRGAQLGLKTICVEK 76
>SPBC17A3.07 |pgr1||glutathione reductase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 464
Score = 46.0 bits (104), Expect = 6e-06
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 522 VEVHGEKGVETVNTKNILIASGSE-VTP--FPGVTFDEKQIITSTGALSLESVPKKMLVI 692
V+++ G + + K ILIA G + P PG + I S G LES PK++ ++
Sbjct: 129 VDMNDGSGTQVFSAKYILIAVGGHPIWPSHIPGAEYG----IDSDGFFELESQPKRVAIV 184
Query: 693 GAGVIGLELGSVYQRLGAD 749
GAG I +EL V+ LG +
Sbjct: 185 GAGYIAVELAGVFAALGTE 203
Score = 36.7 bits (81), Expect = 0.004
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 268 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIVTGEV-TFDFKKMMXYKANAVKGLT 444
LGGTC+N GC+P K + + + L K KQ G ++ +FD+ M+ K +A G
Sbjct: 42 LGGTCVNYGCVPKKIMWNIADLVAKMK-TAKQNGFPNSQLGSFDW-GMIKRKRDAYIGRL 99
Query: 445 GGI 453
GI
Sbjct: 100 NGI 102
>SPBC3F6.03 |trr1|caf4|thioredoxin reductase
Trr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 30.7 bits (66), Expect = 0.24
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 158 THDADLVVIGSGPGGYVAAIKAAQLGMKVVSVERTL 265
TH+ +V+IGSGP G+ AAI A+ +K V E L
Sbjct: 2 THNK-VVIIGSGPAGHTAAIYLARGELKPVMYEGML 36
>SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 457
Score = 30.3 bits (65), Expect = 0.32
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 158 THDADLVVIGSGPGGYVAAIKAAQLGMKVVSVERTL 265
T DAD+++IG+G G + G KV+ +ER +
Sbjct: 3 TQDADIIIIGAGITGCALGAALGRQGRKVLVLERDM 38
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 681 MLVIGAGVIGLELGSVYQRLGADVTAID 764
+++IGAG+ G LG+ R G V ++
Sbjct: 8 IIIIGAGITGCALGAALGRQGRKVLVLE 35
>SPCC1450.07c |||D-amino acid oxidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 348
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 654 LSLESVPKKMLVIGAGVIGLELGSVYQRLG 743
++ E+ P+ ++++GAGVIGL + LG
Sbjct: 1 MTKENKPRDIVIVGAGVIGLTTAWILSDLG 30
>SPAC20G8.04c |||mitochondrial electron transfer
flavoprotein-ubiquinone
oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 164 DADLVVIGSGPGGYVAAIKAAQLGMK 241
D D+ ++G+GP G AAI+ Q K
Sbjct: 90 DVDVCIVGAGPAGLSAAIRIKQQAAK 115
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = -1
Query: 300 YTSNIETSTS*SRVLSTETTFMPS*AALMAATYPPGPEPITTRSAS 163
++S++ +S+S S T+ + S A+++++TY GP IT S S
Sbjct: 146 HSSSVPSSSSSYHSSSMTTSGLSSSASIVSSTYRDGPSIITLVSTS 191
>SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 360
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +3
Query: 555 VNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQ 734
+ T++ +++ G F+ + ++LV+G G +GL + +V +
Sbjct: 131 ITTEDFCTKLPKQISVEEGALFEPMSVAVHAMTRGNLKCGSRVLVMGCGTVGLLMMAVAK 190
Query: 735 RLGA-DVTAIDS 767
GA D+ A+D+
Sbjct: 191 AYGAIDIVAVDA 202
>SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolog
Aif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 27.5 bits (58), Expect = 2.3
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Frame = +3
Query: 552 TVNTKNILIASGSEVTPFPGVTFDEKQII--------TSTGALSLESVPKK-MLVIGAGV 704
T + +++A+G E P D K + + A++ E+ KK +++IG+
Sbjct: 252 TESYTKLILATGGEPNKLPIPGLDSKNVYLLRSIADASKLAAVTTEAGDKKNIVIIGSSF 311
Query: 705 IGLELGSVYQRLGADVTAIDS 767
IGLEL V + V ++S
Sbjct: 312 IGLELAVVLKDHNVSVIGMES 332
>SPBC30B4.06c |||tRNA uridine 5-carboxymethylaminomethyl
modification enzyme|Schizosaccharomyces pombe|chr
2|||Manual
Length = 666
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 125 LVRIATRQYATTHDA--DLVVIGSGPGGYVAAIKAAQLGMKVVSVERT 262
+ R R + T+ + ++VVIG G G AA A++LG K + ++
Sbjct: 1 MFRTTKRYFCTSFNRRKNVVVIGGGHAGVEAAAAASRLGAKTTLLTKS 48
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 675 KKMLVIGAGVIGLELGSVYQRLGADVTAI 761
K ++VIG G G+E + RLGA T +
Sbjct: 17 KNVVVIGGGHAGVEAAAAASRLGAKTTLL 45
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 173 LVVIGSGPGGYVAAIKAAQLGMKVVSVER 259
+ +IGSGP G AA + + G VV ER
Sbjct: 1758 VAIIGSGPAGLAAADQLNRAGHHVVIYER 1786
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 644 DWSTFLGVSTEKNVGDWSWSYRFG 715
+W T+ G +T N+ WS S R+G
Sbjct: 892 EWQTYDGNNTYCNLSGWSQSSRYG 915
>SPBC26H8.01 |thi2|nmt2|thiazole biosynthetic
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 328
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Frame = +2
Query: 113 RSGSLVRIATRQYATTHD----ADLVVIGSGPGGYVAA--IKAAQLGMKVVSVERTL 265
R ++ R TR+Y + D +D+V++G+G G AA I + +K+ +E ++
Sbjct: 55 RESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASV 111
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 675 KKMLVIGAGVIGLELGSVYQRLGADVTAIDS 767
KK+L IG G G L RLGA VTA+D+
Sbjct: 79 KKILDIGCG--GGILSESMARLGASVTAVDA 107
>SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase
Gut2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 649
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 170 DLVVIGSGPGGYVAAIKAAQLGMKVVSVERT 262
D+++IG G G A+ A+ G+ V +E+T
Sbjct: 69 DVLIIGGGATGTGVAVDASTRGLNVCLLEKT 99
>SPBC776.03 |||homoserine dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 376
Score = 26.2 bits (55), Expect = 5.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 116 SGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 259
S +++ T++Y H LVVIG+G G V A +K++S R
Sbjct: 325 SDNIISFTTKRY---HTRPLVVIGAGAGAAVTAAGVLGDMIKIMSQVR 369
>SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1205
Score = 25.4 bits (53), Expect = 9.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 471 LLKEHCD-TSCEAFNSISFIXHHLFKVKCNFTSYNTPLL 358
LL H D +S E+ NS+ FI + F V S N P++
Sbjct: 983 LLSHHPDISSIESENSLDFIAYIRFYVDTVVNSENVPIV 1021
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,223,959
Number of Sequences: 5004
Number of extensions: 67676
Number of successful extensions: 221
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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