Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30480
(780 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g48030.2 68414.m05351 dihydrolipoamide dehydrogenase 1, mitoc... 107 1e-23
At1g48030.1 68414.m05350 dihydrolipoamide dehydrogenase 1, mitoc... 107 1e-23
At3g17240.3 68416.m02203 dihydrolipoamide dehydrogenase 2, mitoc... 104 8e-23
At3g17240.1 68416.m02202 dihydrolipoamide dehydrogenase 2, mitoc... 104 8e-23
At3g16950.1 68416.m02166 dihydrolipoamide dehydrogenase 1, plast... 67 1e-11
At4g16155.1 68417.m02451 dihydrolipoamide dehydrogenase 2, plast... 64 8e-11
At3g24170.1 68416.m03034 glutathione reductase, putative identic... 56 3e-08
At3g17240.2 68416.m02204 dihydrolipoamide dehydrogenase 2, mitoc... 54 1e-07
At3g54660.1 68416.m06048 gluthatione reductase, chloroplast near... 46 2e-05
At3g23410.1 68416.m02951 alcohol oxidase-related similar to long... 37 0.013
At4g28570.1 68417.m04087 alcohol oxidase-related low similarity ... 36 0.040
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 36 0.040
At1g03990.1 68414.m00385 alcohol oxidase-related low similarity ... 35 0.070
At5g57030.1 68418.m07118 lycopene epsilon cyclase identical to l... 34 0.092
At4g35460.1 68417.m05040 thioredoxin reductase 1 / NADPH-depende... 34 0.092
At5g24155.1 68418.m02841 squalene monooxygenase, putative / squa... 32 0.37
At4g19380.1 68417.m02853 alcohol oxidase-related similar to long... 32 0.37
At5g03630.1 68418.m00322 monodehydroascorbate reductase, putativ... 31 0.65
At4g37760.1 68417.m05345 squalene monooxygenase, putative / squa... 30 1.5
At1g06820.1 68414.m00727 carotenoid isomerase, putative similar ... 30 1.5
At4g30720.1 68417.m04354 expressed protein hypothetical protein ... 30 2.0
At3g10230.1 68416.m01224 lycopene beta cyclase (LYC) identical t... 30 2.0
At3g04910.1 68416.m00533 protein kinase family protein contains ... 30 2.0
At5g52430.1 68418.m06506 hydroxyproline-rich glycoprotein family... 29 2.6
At2g17420.1 68415.m02010 thioredoxin reductase 2 / NADPH-depende... 29 2.6
At1g57770.1 68414.m06554 amine oxidase family contains similarit... 29 2.6
At5g24160.1 68418.m02842 squalene monooxygenase 1,2 / squalene e... 29 3.5
At2g37820.1 68415.m04643 DC1 domain-containing protein contains ... 29 3.5
At1g74470.1 68414.m08627 geranylgeranyl reductase identical to g... 29 3.5
At5g07800.1 68418.m00894 flavin-containing monooxygenase family ... 29 4.6
At3g52880.1 68416.m05827 monodehydroascorbate reductase, putativ... 29 4.6
At1g62830.1 68414.m07093 amine oxidase family protein / SWIRM do... 29 4.6
At5g24150.1 68418.m02839 squalene monooxygenase 1,1 / squalene e... 28 6.0
At4g34215.2 68417.m04859 expressed protein 28 6.0
At4g34215.1 68417.m04858 expressed protein 28 6.0
At5g11320.2 68418.m01322 flavin-containing monooxygenase family ... 28 8.0
At5g11320.1 68418.m01321 flavin-containing monooxygenase family ... 28 8.0
At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquino... 28 8.0
At2g06990.1 68415.m00800 HUA enhancer 2 (HEN2) / DExH-box RNA he... 28 8.0
>At1g48030.2 68414.m05351 dihydrolipoamide dehydrogenase 1,
mitochondrial / lipoamide dehydrogenase 1 (MTLPD1)
identical to GB:AAF34795 [gi:12704696] from [Arabidopsis
thaliana]
Length = 507
Score = 107 bits (256), Expect = 1e-23
Identities = 51/85 (60%), Positives = 56/85 (65%)
Frame = +1
Query: 256 KDPTLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIVTGEVTFDFKKMMXYKANAVK 435
K LGGTCLNVGCIPSKALLH+SH+YH AKH F GI V D M+ K NAVK
Sbjct: 74 KRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGIKVSSVEVDLPAMLAQKDNAVK 133
Query: 436 GLTGGIAMLFQKNKVNLVKGVGTIV 510
LT GI LF+KNKV VKG G +
Sbjct: 134 NLTRGIEGLFKKNKVTYVKGYGKFI 158
Score = 101 bits (243), Expect = 4e-22
Identities = 48/88 (54%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
Frame = +3
Query: 504 YSAPNKVEVHGEKGVET-VNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKK 680
+ +PN+V V G T V K+I++A+GS+V PG+T DEK+I++STGALSL VPKK
Sbjct: 157 FISPNEVSVETIDGGNTIVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLSEVPKK 216
Query: 681 MLVIGAGVIGLELGSVYQRLGADVTAID 764
++VIGAG IGLE+GSV+ RLG++VT ++
Sbjct: 217 LIVIGAGYIGLEMGSVWGRLGSEVTVVE 244
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +2
Query: 170 DLVVIGSGPGGYVAAIKAAQLGMKVVSVER 259
D+V+IG GPGGYVAAIKA+QLG+K +E+
Sbjct: 45 DVVIIGGGPGGYVAAIKASQLGLKTTCIEK 74
>At1g48030.1 68414.m05350 dihydrolipoamide dehydrogenase 1,
mitochondrial / lipoamide dehydrogenase 1 (MTLPD1)
identical to GB:AAF34795 [gi:12704696] from [Arabidopsis
thaliana]
Length = 507
Score = 107 bits (256), Expect = 1e-23
Identities = 51/85 (60%), Positives = 56/85 (65%)
Frame = +1
Query: 256 KDPTLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIVTGEVTFDFKKMMXYKANAVK 435
K LGGTCLNVGCIPSKALLH+SH+YH AKH F GI V D M+ K NAVK
Sbjct: 74 KRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGIKVSSVEVDLPAMLAQKDNAVK 133
Query: 436 GLTGGIAMLFQKNKVNLVKGVGTIV 510
LT GI LF+KNKV VKG G +
Sbjct: 134 NLTRGIEGLFKKNKVTYVKGYGKFI 158
Score = 101 bits (243), Expect = 4e-22
Identities = 48/88 (54%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
Frame = +3
Query: 504 YSAPNKVEVHGEKGVET-VNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKK 680
+ +PN+V V G T V K+I++A+GS+V PG+T DEK+I++STGALSL VPKK
Sbjct: 157 FISPNEVSVETIDGGNTIVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLSEVPKK 216
Query: 681 MLVIGAGVIGLELGSVYQRLGADVTAID 764
++VIGAG IGLE+GSV+ RLG++VT ++
Sbjct: 217 LIVIGAGYIGLEMGSVWGRLGSEVTVVE 244
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +2
Query: 170 DLVVIGSGPGGYVAAIKAAQLGMKVVSVER 259
D+V+IG GPGGYVAAIKA+QLG+K +E+
Sbjct: 45 DVVIIGGGPGGYVAAIKASQLGLKTTCIEK 74
>At3g17240.3 68416.m02203 dihydrolipoamide dehydrogenase 2,
mitochondrial / lipoamide dehydrogenase 2 (MTLPD2)
nearly identical to GB:AAF34796 [gi:6984216] from
[Arabidopsis thaliana]; alternative splice form exists
Length = 507
Score = 104 bits (249), Expect = 8e-23
Identities = 49/82 (59%), Positives = 55/82 (67%)
Frame = +1
Query: 256 KDPTLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIVTGEVTFDFKKMMXYKANAVK 435
K LGGTCLNVGCIPSKALLH+SH+YH AKH F G+ V D M+ K AVK
Sbjct: 74 KRGALGGTCLNVGCIPSKALLHSSHMYHEAKHVFANHGVKVSSVEVDLPAMLAQKDTAVK 133
Query: 436 GLTGGIAMLFQKNKVNLVKGVG 501
LT G+ LF+KNKVN VKG G
Sbjct: 134 NLTRGVEGLFKKNKVNYVKGYG 155
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/88 (51%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Frame = +3
Query: 504 YSAPNKVEVHGEKGVETV-NTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKK 680
+ +P++V V G V K+I++A+GS+V PG+T DEK+I++STGALSL +PKK
Sbjct: 157 FLSPSEVSVDTIDGENVVVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLTEIPKK 216
Query: 681 MLVIGAGVIGLELGSVYQRLGADVTAID 764
++VIGAG IGLE+GSV+ RLG++VT ++
Sbjct: 217 LIVIGAGYIGLEMGSVWGRLGSEVTVVE 244
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Frame = +2
Query: 140 TRQYATT--HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 259
TR +A++ D D+V+IG GPGGYVAAIKAAQLG+K +E+
Sbjct: 33 TRGFASSGSDDNDVVIIGGGPGGYVAAIKAAQLGLKTTCIEK 74
>At3g17240.1 68416.m02202 dihydrolipoamide dehydrogenase 2,
mitochondrial / lipoamide dehydrogenase 2 (MTLPD2)
nearly identical to GB:AAF34796 [gi:6984216] from
[Arabidopsis thaliana]; alternative splice form exists
Length = 507
Score = 104 bits (249), Expect = 8e-23
Identities = 49/82 (59%), Positives = 55/82 (67%)
Frame = +1
Query: 256 KDPTLGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIVTGEVTFDFKKMMXYKANAVK 435
K LGGTCLNVGCIPSKALLH+SH+YH AKH F G+ V D M+ K AVK
Sbjct: 74 KRGALGGTCLNVGCIPSKALLHSSHMYHEAKHVFANHGVKVSSVEVDLPAMLAQKDTAVK 133
Query: 436 GLTGGIAMLFQKNKVNLVKGVG 501
LT G+ LF+KNKVN VKG G
Sbjct: 134 NLTRGVEGLFKKNKVNYVKGYG 155
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/88 (51%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
Frame = +3
Query: 504 YSAPNKVEVHGEKGVETV-NTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKK 680
+ +P++V V G V K+I++A+GS+V PG+T DEK+I++STGALSL +PKK
Sbjct: 157 FLSPSEVSVDTIDGENVVVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLTEIPKK 216
Query: 681 MLVIGAGVIGLELGSVYQRLGADVTAID 764
++VIGAG IGLE+GSV+ RLG++VT ++
Sbjct: 217 LIVIGAGYIGLEMGSVWGRLGSEVTVVE 244
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Frame = +2
Query: 140 TRQYATT--HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 259
TR +A++ D D+V+IG GPGGYVAAIKAAQLG+K +E+
Sbjct: 33 TRGFASSGSDDNDVVIIGGGPGGYVAAIKAAQLGLKTTCIEK 74
>At3g16950.1 68416.m02166 dihydrolipoamide dehydrogenase 1,
plastidic / lipoamide dehydrogenase 1 (PTLPD1) identical
to plastidic lipoamide dehydrogenase from Arabidopsis
thaliana [gi:7159282]
Length = 570
Score = 66.9 bits (156), Expect = 1e-11
Identities = 36/85 (42%), Positives = 55/85 (64%)
Frame = +3
Query: 513 PNKVEVHGEKGVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVI 692
P KV+ +G+ + + K+I+IA+GS G+ D K +ITS AL LESVP+ + ++
Sbjct: 204 PQKVK-YGKDNI--ITAKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLESVPEWIAIV 260
Query: 693 GAGVIGLELGSVYQRLGADVTAIDS 767
G+G IGLE VY LG++VT I++
Sbjct: 261 GSGYIGLEFSDVYTALGSEVTFIEA 285
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = +1
Query: 268 LGGTCLNVGCIPSKALLHNSHLYH--MAKHDFKQRGIVTGEVTFDFKKMMXYKANAVKGL 441
+GGTC+N GC+PSKALL S +H K G+ +D + + + N +
Sbjct: 120 VGGTCVNRGCVPSKALLAVSGRMRELQNEHHMKSFGLQVSAAGYDRQGVADHANNLATKI 179
Query: 442 TGGIAMLFQKNKVNLVKGVGTIVPQIKLKYTERRVL 549
+ + V+++ G G+++ K+KY + ++
Sbjct: 180 RNNLTNSMKAIGVDILTGFGSVLGPQKVKYGKDNII 215
Score = 35.5 bits (78), Expect = 0.040
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 164 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 256
D DL++IG+G GG+ AA+ A + G+K +E
Sbjct: 86 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIE 116
>At4g16155.1 68417.m02451 dihydrolipoamide dehydrogenase 2,
plastidic / lipoamide dehydrogenase 2 (PTLPD2) identical
to plastidic lipoamide dehydrogenase from Arabidopsis
thaliana [gi:7159284]
Length = 567
Score = 64.5 bits (150), Expect = 8e-11
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +3
Query: 543 GVETVNTKNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLVIGAGVIGLELG 722
G + K+I+IA+GS G+ D K +ITS AL LESVP + ++G+G IGLE
Sbjct: 208 GDNIITGKDIIIATGSVPFVPKGIEVDGKTVITSDHALKLESVPDWIAIVGSGYIGLEFS 267
Query: 723 SVYQRLGADVTAIDS 767
VY LG++VT I++
Sbjct: 268 DVYTALGSEVTFIEA 282
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +1
Query: 268 LGGTCLNVGCIPSKALLHNSHLYH--MAKHDFKQRGIVTGEVTFDFKKMMXYKANAVKGL 441
+GGTC+N GC+PSKALL S +H K G+ +D + + + +N +
Sbjct: 118 VGGTCVNRGCVPSKALLAVSGRMRELQNEHHMKAFGLQVSAAGYDRQGVADHASNLATKI 177
Query: 442 TGGIAMLFQKNKVNLVKGVGTIVPQIKLKY 531
+ + V+++ G G ++ K+KY
Sbjct: 178 RNNLTNSMKALGVDILTGFGAVLGPQKVKY 207
Score = 35.5 bits (78), Expect = 0.040
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 164 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 256
D DL++IG+G GG+ AA+ A + G+K +E
Sbjct: 84 DYDLIIIGAGVGGHGAALHAVEKGLKTAIIE 114
>At3g24170.1 68416.m03034 glutathione reductase, putative identical
to GB:P48641 from [Arabidopsis thaliana]
Length = 499
Score = 55.6 bits (128), Expect = 3e-08
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +3
Query: 513 PNKVEVHGEKGVETVNT-KNILIASGSEVTPFPGVTFDEKQIITSTGALSLESVPKKMLV 689
PN+VEV G + T K+ILIA+GS P + E I TS ALSLE PK+ +V
Sbjct: 151 PNEVEVRQIDGTKISYTAKHILIATGSRAQK-PNIPGHELAI-TSDEALSLEEFPKRAIV 208
Query: 690 IGAGVIGLELGSVYQRLGADV 752
+G G I +E S+++ +GA V
Sbjct: 209 LGGGYIAVEFASIWRGMGATV 229
Score = 41.1 bits (92), Expect = 8e-04
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 268 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRG-IVTGEVTFDFKKMMXYKANAVKGLT 444
+GGTC+ GC+P K L++ + Y D K G + +V F +KK++ K + + L
Sbjct: 69 VGGTCVIRGCVPKKILVYGA-TYGGELEDAKNYGWEINEKVDFTWKKLLQKKTDEILRLN 127
Query: 445 GGIAMLFQKNKVNLVKGVGTIV 510
L V L +G G +V
Sbjct: 128 NIYKRLLANAAVKLYEGEGRVV 149
>At3g17240.2 68416.m02204 dihydrolipoamide dehydrogenase 2,
mitochondrial / lipoamide dehydrogenase 2 (MTLPD2)
nearly identical to GB:AAF34796 [gi:6984216] from
[Arabidopsis thaliana]; alternative splice form exists
Length = 127
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 2/42 (4%)
Frame = +2
Query: 140 TRQYATT--HDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 259
TR +A++ D D+V+IG GPGGYVAAIKAAQLG+K +E+
Sbjct: 33 TRGFASSGSDDNDVVIIGGGPGGYVAAIKAAQLGLKTTCIEK 74
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1
Query: 256 KDPTLGGTCLNVGCIPSKALL 318
K LGGTCLNVGCIPSK +L
Sbjct: 74 KRGALGGTCLNVGCIPSKVIL 94
>At3g54660.1 68416.m06048 gluthatione reductase, chloroplast nearly
identical to SP|P42770 Glutathione reductase,
chloroplast precursor (EC 1.8.1.7) (GR) (GRASE)
{Arabidopsis thaliana}; identical to cDNA glutathione
reductase GI:451197
Length = 565
Score = 46.4 bits (105), Expect = 2e-05
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +3
Query: 450 YRNALSEEQG*SCQRCRNYSAPNKVEVHGEKGVETVNTKNILIASGSE--VTPFPGVTFD 623
Y+N LS+ + P+ V+V G+ T+NILIA G + PG F
Sbjct: 192 YKNILSKANVKLIEGRGKVIDPHTVDVDGK----IYTTRNILIAVGGRPFIPDIPGKEF- 246
Query: 624 EKQIITSTGALSLESVPKKMLVIGAGVIGLELGSVYQRLGADV 752
I S AL L S PKK+ ++G G I LE ++ L +V
Sbjct: 247 ---AIDSDAALDLPSKPKKIAIVGGGYIALEFAGIFNGLNCEV 286
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +1
Query: 268 LGGTCLNVGCIPSKALLHNSHLYHMAKHDFKQRGIVTGEVTFDFKKMMXYKANAVKGLTG 447
+GGTC+ GC+P K L++ S H + E + D+ ++ K ++ LTG
Sbjct: 131 VGGTCVLRGCVPKKLLVYASKYSHEFEDSHGFGWKYETEPSHDWTTLIANKNAELQRLTG 190
Query: 448 GIAMLFQKNKVNLVKGVGTIV 510
+ K V L++G G ++
Sbjct: 191 IYKNILSKANVKLIEGRGKVI 211
>At3g23410.1 68416.m02951 alcohol oxidase-related similar to long
chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 746
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Frame = +2
Query: 155 TTHDA-----DLVVIGSGPGGYVAAIKAAQLGMKVVSVER 259
T HDA D+VV+GSG GG VAA A+ G+KVV +E+
Sbjct: 224 TEHDAIRIKCDVVVVGSGSGGGVAASVLAKSGLKVVVLEK 263
>At4g28570.1 68417.m04087 alcohol oxidase-related low similarity to
long chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 748
Score = 35.5 bits (78), Expect = 0.040
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2
Query: 170 DLVVIGSGPGGYVAAIKAAQLGMKVVSVER 259
D VV+GSG GG VAA A+ G+KV+ +E+
Sbjct: 239 DAVVVGSGSGGGVAAANLAKAGLKVLVLEK 268
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 35.5 bits (78), Expect = 0.040
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +2
Query: 170 DLVVIGSGPGGYVAAIKAAQLGMKVVSVE 256
++V+IGSGP GY AAI AA+ +K V E
Sbjct: 85 NVVIIGSGPAGYTAAIYAARANLKPVVFE 113
>At1g03990.1 68414.m00385 alcohol oxidase-related low similarity to
long chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]; Location
of EST 248L9T7, gb|AA713296
Length = 758
Score = 34.7 bits (76), Expect = 0.070
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 164 DADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 259
+ D VV+GSG GG VAA A+ G++VV +E+
Sbjct: 245 ECDAVVVGSGCGGGVAAAILAKSGLRVVVIEK 276
>At5g57030.1 68418.m07118 lycopene epsilon cyclase identical to
lycopene epsilon cyclase [GI:1399181]
Length = 524
Score = 34.3 bits (75), Expect = 0.092
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 170 DLVVIGSGPGGYVAAIKAAQLGMKV 244
DLVVIG GP G A ++A+LG+KV
Sbjct: 110 DLVVIGCGPAGLALAAESAKLGLKV 134
>At4g35460.1 68417.m05040 thioredoxin reductase 1 / NADPH-dependent
thioredoxin reductase 1 (NTR1) identical to SP|Q39243
Length = 375
Score = 34.3 bits (75), Expect = 0.092
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 104 PTFRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 256
P+ S + A TH+ L ++GSGP + AAI AA+ +K + E
Sbjct: 30 PSLASAAFSSSAVMNGLETHNTRLCIVGSGPAAHTAAIYAARAELKPLLFE 80
>At5g24155.1 68418.m02841 squalene monooxygenase, putative /
squalene epoxidase, putative similar to SP|O65404 (SE
1,1), SP|O65402 (SE 1,2)
Length = 121
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +2
Query: 167 ADLVVIGSGPGGYVAAIKAAQLGMKVVSVERTL 265
AD++++G+G GG A A+ G +V+++ER +
Sbjct: 48 ADVIIVGAGVGGSALAYSLAKDGRRVLAIERDM 80
>At4g19380.1 68417.m02853 alcohol oxidase-related similar to long
chain fatty alcohol oxidase from Candida cloacae
[GI:6983581], Candida tropicalis [GI:6983594]
Length = 726
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 170 DLVVIGSGPGGYVAAIKAAQLGMKVVSVE 256
D VV+GSG GG VAA A+ G KV+ +E
Sbjct: 225 DAVVVGSGSGGGVAAGVLAKAGYKVLVIE 253
>At5g03630.1 68418.m00322 monodehydroascorbate reductase, putative
monodehydroascorbate reductase (NADH), cucumber,
PIR:JU0182
Length = 435
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 651 ALSLESVPK-KMLVIGAGVIGLELGSVYQRLGADVTAI 761
A ++E+ K K +V+G G IGLELG+ + DVT +
Sbjct: 156 AYAMETKEKGKAVVVGGGYIGLELGAALKANNLDVTMV 193
>At4g37760.1 68417.m05345 squalene monooxygenase, putative /
squalene epoxidase, putative similar to SP|O65404 (SE
1,1), SP|O65402 (SE 1,2), SP|O65403 (SE 2)
Length = 525
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 89 LKLASPTFRSGSLVRIATRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVERTL 265
L+ S T VR T + D D++++G+G G A + G +V +ER L
Sbjct: 29 LRRRSKTIHGSVNVRNGTLTVKSGTDVDIIIVGAGVAGAALAHTLGKEGRRVHVIERDL 87
>At1g06820.1 68414.m00727 carotenoid isomerase, putative similar to
carotenoid isomerase from Lycopersicon esculentum
[gi:19550437]; contains Pfam profile: PF02032 Phytoene
dehydrogenase related enzyme
Length = 595
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 170 DLVVIGSGPGGYVAAIKAAQLGMKVVSVERTLL 268
D +VIGSG GG VAA + A +V+ +E+ L+
Sbjct: 79 DAIVIGSGIGGLVAATQLAVKEARVLVLEKYLI 111
>At4g30720.1 68417.m04354 expressed protein hypothetical protein -
Synechocystis sp. (strain PCC 6803),PIR2:S76076
Length = 749
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 173 LVVIGSGPGGYVAAIKAAQLGMKVVSVER 259
+ V+G GP G AA+ A+ G V +ER
Sbjct: 269 IAVVGGGPSGLFAALVLAEFGADVTLIER 297
>At3g10230.1 68416.m01224 lycopene beta cyclase (LYC) identical to
lycopene beta cyclase GI:1399183|GB:AAB53337
[Arabidopsis thaliana]
Length = 501
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 170 DLVVIGSGPGGYVAAIKAAQLGMKVVSVE 256
DL ++G GP G A + ++ G+ V S++
Sbjct: 84 DLAIVGGGPAGLAVAQQVSEAGLSVCSID 112
>At3g04910.1 68416.m00533 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 700
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -1
Query: 591 QTQKRLEYFWYLQSQHPSLRVLQLYLGHYSSYTFDKINLVLLKEHCDTSCEAFNSISFI 415
+T+ RL W LQ Q S + + GH S ++ ++ SCEA N I+ I
Sbjct: 535 ETEVRLRELWKLQQQQESRELSSIDSGHNHSEEEEEEEVLYEDPENMFSCEAGNEINHI 593
>At5g52430.1 68418.m06506 hydroxyproline-rich glycoprotein family
protein Common family member At4g25620 [Arabidopsis
thaliana]
Length = 438
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 727 TEPSSKPITPAPITNIFFGTDSKESAPVDVIICFSSKVT 611
TEPS+ P TP P +++ T S P ++ S ++T
Sbjct: 151 TEPSTAPYTPPPESSVHITTPSSPEVPFAQLLTSSLELT 189
>At2g17420.1 68415.m02010 thioredoxin reductase 2 / NADPH-dependent
thioredoxin reductase 2 (NTR2) identical to SP|Q39242
Length = 330
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 158 THDADLVVIGSGPGGYVAAIKAAQLGMKVVSVE 256
TH + ++GSGP + AAI A++ +K + E
Sbjct: 3 THKTKVCIVGSGPAAHTAAIYASRAELKPLLFE 35
>At1g57770.1 68414.m06554 amine oxidase family contains similarity
to carotenoid isomerase [Lycopersicon esculentum]
GI:19550437, phytoene dehydrogenase (PDH1) GI:433144
from (Cercospora nicotianae); contains Pfam profile
PF01593 amine oxidase, flavin-containing
Length = 574
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Frame = +2
Query: 104 PTFRSGSLVRIATRQYATTH-----------DADLVVIGSGPGGYVAAIKAAQLGMKVVS 250
PT RS S +R ++ A+++ +AD+VVIGSG GG A+ V+
Sbjct: 21 PTIRSSSFIRSSSSSSASSNGNLKEPFSGEPEADVVVIGSGIGGLCCGALLARYDQDVIV 80
Query: 251 VE 256
+E
Sbjct: 81 LE 82
>At5g24160.1 68418.m02842 squalene monooxygenase 1,2 / squalene
epoxidase 1,2 (SQP1,2) identical to SP|O65402
Length = 517
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 167 ADLVVIGSGPGGYVAAIKAAQLGMKVVSVERTL 265
AD++++G+G GG A A+ G +V +ER +
Sbjct: 46 ADVIIVGAGVGGSALAYALAKDGRRVHVIERDM 78
>At2g37820.1 68415.m04643 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 290
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 365 LCLKSCLAIWYRCELCSKAFDGIHPTLRQVPPKV 264
+C +S ++YRC++C FD +HP Q+P V
Sbjct: 92 ICDESVEGLFYRCKICE--FD-VHPLCTQLPQHV 122
>At1g74470.1 68414.m08627 geranylgeranyl reductase identical to
geranylgeranyl reductase GB:Y14044 [Arabidopsis
thaliana] (involvement: chlorophyll, the tocopherol and
the phylloquinone pathways Eur J Biochem 1998 Jan
15;251(1-2):413-7)
Length = 467
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 173 LVVIGSGPGGYVAAIKAAQLGMKVVSVERTL 265
+ VIG GP G AA AQ G++ + +ER +
Sbjct: 58 VAVIGGGPAGGAAAETLAQGGIETILIERKM 88
>At5g07800.1 68418.m00894 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase 2 (FMO2) from Homo
sapiens [GI:1834493]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like
Length = 460
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 140 TRQYATTHDADLVVIGSGPGGYVAAIKAAQLGMKVVSVER 259
T + + + + VIG+GP G V+A + + G KVV +E+
Sbjct: 5 TSEASRSRSKKVCVIGAGPAGLVSARELRKEGHKVVVLEQ 44
>At3g52880.1 68416.m05827 monodehydroascorbate reductase, putative
monodehydroascorbate reductase (NADH), Lycoperison
esculentum, PIR:T06407
Length = 434
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 678 KMLVIGAGVIGLELGSVYQRLGADVTAI 761
K +V+G G IGLEL +V + DVT +
Sbjct: 165 KAVVVGGGYIGLELSAVLRINNLDVTMV 192
>At1g62830.1 68414.m07093 amine oxidase family protein / SWIRM
domain-containing protein contains Pfam profile: PF01593
Flavin containing amine oxidase
Length = 844
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 59 KKLLNMGYKFL-KLASPTFRSGSLVRIAT-RQYATTHDADLVVIGSGPGGYVAAIKAAQL 232
K L++ Y FL + F +++ A R + ++VV+G+G G VAA + +
Sbjct: 228 KTLVDTAYNFLLEHGYINFGLAPVIKEAKLRSFDGVEPPNVVVVGAGLAGLVAARQLLSM 287
Query: 233 GMKVVSVE 256
G +V+ +E
Sbjct: 288 GFRVLVLE 295
>At5g24150.1 68418.m02839 squalene monooxygenase 1,1 / squalene
epoxidase 1,1 (SQP1,1) identical to SP|O65404
Length = 516
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 170 DLVVIGSGPGGYVAAIKAAQLGMKVVSVERTL 265
D++++G+G GG A A+ G +V +ER L
Sbjct: 47 DVIIVGAGVGGSALAYALAKDGRRVHVIERDL 78
>At4g34215.2 68417.m04859 expressed protein
Length = 260
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 176 VVIGSGPGGYVAAIKAAQLGMKVVSV 253
V I SG GGY+ ++ AQLG+K+ +V
Sbjct: 198 VAIASG-GGYIDKVREAQLGLKLSNV 222
>At4g34215.1 68417.m04858 expressed protein
Length = 260
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 176 VVIGSGPGGYVAAIKAAQLGMKVVSV 253
V I SG GGY+ ++ AQLG+K+ +V
Sbjct: 198 VAIASG-GGYIDKVREAQLGLKLSNV 222
>At5g11320.2 68418.m01322 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenases YUCCA [gi:16555352],
YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from
Arabidopsis thaliana
Length = 357
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +2
Query: 176 VVIGSGPGGYVAAIKAAQLGMKVVSVERTLL*EVLVSMLDVYHQKLYCTTHICTI 340
+++G+GP G A + G+ V +ERT L KL+ H C +
Sbjct: 18 IIVGAGPSGLAVAACLSNRGVPSVILERTDCLASLWQKRTYDRLKLHLPKHFCEL 72
>At5g11320.1 68418.m01321 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenases YUCCA [gi:16555352],
YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from
Arabidopsis thaliana
Length = 411
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +2
Query: 176 VVIGSGPGGYVAAIKAAQLGMKVVSVERTLL*EVLVSMLDVYHQKLYCTTHICTI 340
+++G+GP G A + G+ V +ERT L KL+ H C +
Sbjct: 18 IIVGAGPSGLAVAACLSNRGVPSVILERTDCLASLWQKRTYDRLKLHLPKHFCEL 72
>At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquinone
oxidoreductase family protein contains Pfam profile:
PF05187 Electron transfer flavoprotein-ubiquinone
oxidoreductase
Length = 633
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 170 DLVVIGSGPGGYVAAIKAAQLGMK 241
D++++G+GP G AAI+ QL +
Sbjct: 101 DVLIVGAGPAGLSAAIRLKQLSQE 124
>At2g06990.1 68415.m00800 HUA enhancer 2 (HEN2) / DExH-box RNA
helicase, putative nearly identical to HUA enhancer 2
[Arabidopsis thaliana] GI:16024936
Length = 995
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 301 PSKALLHNSHLYHMAKHDFKQRGIVTGEVT 390
P KAL ++ Y +H+FK G++TG+VT
Sbjct: 132 PLKAL--SNQKYRELQHEFKDVGLMTGDVT 159
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,815,392
Number of Sequences: 28952
Number of extensions: 359512
Number of successful extensions: 1094
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1746037600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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