Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30479
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   141   6e-36
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   141   6e-36
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   128   5e-32
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   1.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.6  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.3  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  141 bits (341), Expect = 6e-36
 Identities = 64/82 (78%), Positives = 74/82 (90%)
 Frame = +3

Query: 513 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGSED 692
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLG ED
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 693 FDNRMVNHFVQEFKRKYKKDLA 758
           FDNR+V +  Q+FK+K+K D++
Sbjct: 61  FDNRLVEYCTQDFKKKHKADIS 82


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  141 bits (341), Expect = 6e-36
 Identities = 64/82 (78%), Positives = 74/82 (90%)
 Frame = +3

Query: 513 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGSED 692
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLG ED
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 693 FDNRMVNHFVQEFKRKYKKDLA 758
           FDNR+V +  Q+FK+K+K D++
Sbjct: 61  FDNRLVEYCTQDFKKKHKADIS 82


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  128 bits (309), Expect = 5e-32
 Identities = 56/88 (63%), Positives = 77/88 (87%)
 Frame = +3

Query: 513 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGSED 692
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FEV +T+GDTHLG ED
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGED 59

Query: 693 FDNRMVNHFVQEFKRKYKKDLATTRELL 776
           FD +++++F++  K+K+KKD+   ++ L
Sbjct: 60  FDQKVMDYFIKMVKQKHKKDIRADKKAL 87


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 15/85 (17%), Positives = 33/85 (38%)
 Frame = -1

Query: 719 KVVDHAIVKVLTSQVGVAGGGFHLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVS 540
           K++   I KVL  +   +G  +           G + G   +++D Y +    +  K + 
Sbjct: 210 KLLTSKIYKVLEEKYKTSGSLYTCWSEFTQKTQGQIYGIKVDIRDAYGNVKIPVLCKLIQ 269

Query: 539 NRSSSRFIDDWRTFKPEMVPASFVA 465
           +  +     + + F  + +   FVA
Sbjct: 270 SIPTHLLDSEKKNFIVDHISNQFVA 294


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 286 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 411
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 58  LPAREGGDHRQRPGQQDH 111
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +3

Query: 357 FH-GAYENEGNCRSL---SWQNCA---ECSYHGSRVLQ*LSKTSHKRCR 482
           FH GA+  EG C+S    ++ N +   EC  +G  V+   ++T+ K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = +3

Query: 483 YHLWLERSPIINEPTAAAIAYGLDKKGTGERNVLIFDL 596
           +H+ +  + +IN   A ++ +  D    G +N+ + DL
Sbjct: 193 FHVNMSHNKLINLVVAPSVPFEQDTGLGGLQNIKVLDL 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,119
Number of Sequences: 336
Number of extensions: 4537
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)