Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30479
(776 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 162 2e-40
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 162 3e-40
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 159 2e-39
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 132 4e-31
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 90 2e-18
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 88 9e-18
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 1e-11
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 46 3e-05
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 1.0
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.4
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.4
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 29 3.2
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 3.2
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 3.2
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 3.2
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 4.2
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 4.2
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003) 28 7.3
SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0) 28 7.3
SB_20600| Best HMM Match : zf-C3HC4 (HMM E-Value=0.65) 28 9.7
SB_55110| Best HMM Match : Squash (HMM E-Value=0.21) 28 9.7
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 162 bits (394), Expect = 2e-40
Identities = 75/82 (91%), Positives = 78/82 (95%)
Frame = +2
Query: 2 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 181
AK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVAM
Sbjct: 2 AKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAM 61
Query: 182 NPNNTIFDAKRLIGRKFEDATV 247
NP NT+FDAKRLIGRKF+D V
Sbjct: 62 NPENTVFDAKRLIGRKFDDPVV 83
Score = 153 bits (371), Expect = 2e-37
Identities = 70/89 (78%), Positives = 80/89 (89%)
Frame = +3
Query: 510 IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGSE 689
IINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLG E
Sbjct: 172 IINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGE 231
Query: 690 DFDNRMVNHFVQEFKRKYKKDLATTRELL 776
DFDN+MV+HFV++FK+KYKKD+ + +
Sbjct: 232 DFDNKMVDHFVKQFKQKYKKDITPNKRAM 260
Score = 142 bits (345), Expect = 2e-34
Identities = 65/88 (73%), Positives = 77/88 (87%)
Frame = +1
Query: 247 ASRMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAV 426
A M HWPF V+ +G +PKI+V +KGE K+FFPEE+SSMVLTKMKETAEAYLG V +AV
Sbjct: 84 ARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAV 143
Query: 427 ITVPAYFNDSQRQATKDAGTISGLNVLQ 510
+TVPAYF+DSQRQATKDAGTI+GLNVL+
Sbjct: 144 VTVPAYFHDSQRQATKDAGTIAGLNVLR 171
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 162 bits (393), Expect = 3e-40
Identities = 73/83 (87%), Positives = 81/83 (97%)
Frame = +2
Query: 5 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 184
KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA+N
Sbjct: 3 KAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVALN 62
Query: 185 PNNTIFDAKRLIGRKFEDATVQA 253
P NTIFDAKRLIGR+++DATVQ+
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQS 85
Score = 152 bits (368), Expect = 4e-37
Identities = 70/84 (83%), Positives = 79/84 (94%), Gaps = 1/84 (1%)
Frame = +3
Query: 510 IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGS 686
+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSILTI+DG +FEVKSTAGDTHLG
Sbjct: 172 VINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGG 231
Query: 687 EDFDNRMVNHFVQEFKRKYKKDLA 758
EDFDNR+VNHFV EFKRKYKKD++
Sbjct: 232 EDFDNRLVNHFVAEFKRKYKKDMS 255
Score = 141 bits (341), Expect = 7e-34
Identities = 67/87 (77%), Positives = 76/87 (87%)
Frame = +1
Query: 250 SRMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVI 429
S MK WPF+++SD KPKI+V YKGE KTF EE+SSMVL KMKETAEAYLG+ V +AVI
Sbjct: 85 SDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVI 144
Query: 430 TVPAYFNDSQRQATKDAGTISGLNVLQ 510
TVPAYFNDSQRQATKDAGTI+GLNVL+
Sbjct: 145 TVPAYFNDSQRQATKDAGTIAGLNVLR 171
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 159 bits (387), Expect = 2e-39
Identities = 73/82 (89%), Positives = 78/82 (95%)
Frame = +2
Query: 5 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 184
KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVAMN
Sbjct: 3 KAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVAMN 62
Query: 185 PNNTIFDAKRLIGRKFEDATVQ 250
P NTIFDAKRLIGR+F+D V+
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVK 84
Score = 147 bits (356), Expect = 1e-35
Identities = 69/89 (77%), Positives = 77/89 (86%)
Frame = +3
Query: 510 IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGSE 689
IINEPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS+L+IEDGIFEVKST GDTHLG E
Sbjct: 265 IINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGE 324
Query: 690 DFDNRMVNHFVQEFKRKYKKDLATTRELL 776
DFDN MV+ FV++FK+KYKKD+ + L
Sbjct: 325 DFDNNMVDFFVKQFKQKYKKDITPNKRAL 353
Score = 118 bits (284), Expect = 5e-27
Identities = 55/70 (78%), Positives = 62/70 (88%)
Frame = +1
Query: 274 EVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFND 453
EVV++ G+PK+KV YKGE KTFF EE+SSMVL KMKETAEAYLG V +AV+TVPAYFND
Sbjct: 118 EVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFND 177
Query: 454 SQRQATKDAG 483
SQRQATKDAG
Sbjct: 178 SQRQATKDAG 187
Score = 92.3 bits (219), Expect = 4e-19
Identities = 44/54 (81%), Positives = 49/54 (90%)
Frame = +1
Query: 349 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLQ 510
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVL+
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLR 264
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 132 bits (318), Expect = 4e-31
Identities = 66/107 (61%), Positives = 81/107 (75%), Gaps = 1/107 (0%)
Frame = +2
Query: 17 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 193
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 194 TIFDAKRLIGRKFEDATVQAA*STGLSRLSVMEANLRSR*HIRVKTK 334
T+FDAKRLIGR ++D +VQ V++ N + H++VK K
Sbjct: 764 TVFDAKRLIGRSWDDTSVQN--DLKFFPFKVVDKNKKP--HVQVKVK 806
Score = 123 bits (296), Expect = 2e-28
Identities = 54/82 (65%), Positives = 71/82 (86%)
Frame = +3
Query: 510 IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGSE 689
IINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLG E
Sbjct: 870 IINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGE 928
Query: 690 DFDNRMVNHFVQEFKRKYKKDL 755
DFD ++ HF++ +K+K K++
Sbjct: 929 DFDQNVMEHFIKLYKKKKGKNI 950
Score = 118 bits (285), Expect = 4e-27
Identities = 56/85 (65%), Positives = 69/85 (81%)
Frame = +1
Query: 256 MKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITV 435
+K +PF+VV KP ++V K E KTF EE+S+MVLTKMKETAEAYLGK V +AV+TV
Sbjct: 785 LKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTV 844
Query: 436 PAYFNDSQRQATKDAGTISGLNVLQ 510
PAYFND+QRQATKDAG I+GL V++
Sbjct: 845 PAYFNDAQRQATKDAGAIAGLTVMR 869
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 90.2 bits (214), Expect = 2e-18
Identities = 42/68 (61%), Positives = 57/68 (83%)
Frame = +1
Query: 304 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 483
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 484 TISGLNVL 507
TI+GL+VL
Sbjct: 62 TIAGLDVL 69
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/25 (80%), Positives = 20/25 (80%), Gaps = 2/25 (8%)
Frame = +3
Query: 510 IINEPTAAAIAYGLDKK--GTGERN 578
IINEPTAAAIAYGLDK G ERN
Sbjct: 95 IINEPTAAAIAYGLDKARGGKAERN 119
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 87.8 bits (208), Expect = 9e-18
Identities = 39/88 (44%), Positives = 60/88 (68%)
Frame = +3
Query: 510 IINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGSE 689
+INEPTAAA+AYGL KK G NV++ DLGGGT DVS+L I+ G+F + AG+ LG +
Sbjct: 202 VINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQ 260
Query: 690 DFDNRMVNHFVQEFKRKYKKDLATTREL 773
DF+ R + + +Q +++ + L + ++
Sbjct: 261 DFNARFMQYLLQLIHKRFNRQLTCSEDI 288
Score = 87.4 bits (207), Expect = 1e-17
Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Frame = +2
Query: 5 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 178
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 179 MNPNNTIFDAKRLIGRKF 232
+NP NTI+DAKR IG+ F
Sbjct: 90 INPKNTIYDAKRFIGKTF 107
Score = 56.0 bits (129), Expect = 3e-08
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 259 KHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITV 435
K + F V +D G V KG PEE+ V+ K++ AE L TV AV++V
Sbjct: 117 KLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSV 176
Query: 436 PAYFNDSQRQATKDAGTISGLNVLQ 510
PA F+ QR AT A +++G+ VL+
Sbjct: 177 PAEFDIKQRNATVKAASLAGITVLR 201
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 80.6 bits (190), Expect = 1e-15
Identities = 33/60 (55%), Positives = 47/60 (78%)
Frame = +3
Query: 579 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGSEDFDNRMVNHFVQEFKRKYKKDLA 758
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LG EDFDN ++ + EFK++ DL+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 67.7 bits (158), Expect = 1e-11
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +1
Query: 262 HWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 438
H P++VV I+V Y G+ + F PE+V +M+ T++K TAE L V + VI+VP
Sbjct: 145 HLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVP 204
Query: 439 AYFNDSQRQATKDAGTISGLNVLQ 510
+Y+ D QR+ DA +GLN L+
Sbjct: 205 SYYTDRQRRCMLDASATAGLNCLR 228
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = +3
Query: 510 IINEPTAAAIAYGLDKKGTGE---RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHL 680
++N+ TA ++AYG+ K+ RNV+ D+G + V I G +V STA + +L
Sbjct: 229 LMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNL 288
Query: 681 GSEDFDNRMVNHFVQEFKRKYKKDL 755
G DFD +V HF QEFK KYK D+
Sbjct: 289 GGRDFDYVLVEHFAQEFKTKYKIDV 313
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 17 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 172
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +2
Query: 182 NPNNTIFDAKRLIGRKFEDATVQ 250
N NTI KR IGRKF D VQ
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQ 140
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = +1
Query: 298 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 477
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 478 AGTISGLNVLQ 510
A + GLNVLQ
Sbjct: 127 AAELVGLNVLQ 137
Score = 38.3 bits (85), Expect = 0.007
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 16/95 (16%)
Frame = +3
Query: 510 IINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFDVSIL------TIEDGIFE--- 650
I+N TA A+ YGL ++ T E++ + +D+G + +I+ T + GI E
Sbjct: 138 IMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIVGYSMTKTKDRGISETAP 197
Query: 651 ---VKSTAGDTHLGSEDFDNRMVNHFVQEFKRKYK 746
+K D LG D R+ +H VQ FK+ YK
Sbjct: 198 QLVIKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYK 232
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/57 (33%), Positives = 38/57 (66%)
Frame = +3
Query: 570 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGSEDFDNRMVNHFVQEFKRK 740
+ VL++ LGG + DV++L++ +G+++V +T D LG +FD +++ +FKR+
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQ 209
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 68 GKVEIIANDQGNRTTPSYVAFTDTERLI 151
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 77 EIIANDQGNRTTPSYVAFT-DTERL 148
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +3
Query: 486 HLWLERSPIINEPTAAAIAYGLDK--KGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKS 659
H L + T A A GL +G E + D G GT VS + +E+G +++
Sbjct: 1489 HAQLNKPADFTVETKGAGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHI 1548
Query: 660 TAGDTHLGSEDF 695
D H+ F
Sbjct: 1549 KFADEHIPGSPF 1560
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 576 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGSEDF 695
+ LI D G+F VS E+GI ++ GD H+ F
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 579 VLIFDLGGGTFDVSILTIEDGIFEVK 656
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 585 IFDLGGGTFDVSILTIEDGIFEV 653
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 589 LTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 732
L S+A +T P+LP +V+ R PPP+T ++ T+ T+ STT + S+
Sbjct: 97 LDSSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 85 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 255
RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 676 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 560
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 185 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 87
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 4.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 203 RILCCWGSSPPGSWRH 156
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 4.2
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 203 RILCCWGSSPPGSWRH 156
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 592 TSAAVPSTCPSLPSRMVSSR*NPPPATP 675
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = -2
Query: 721 TKWLTMRLSKSSLPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP* 542
+ W+ KS K P +S + SS TSK PP + +ST SP
Sbjct: 1244 SSWMVTNCQKSC--KRCPPEPPTSSIMQSSSNIPTTSKTPPSSTCLSTAVSPAAGADSNN 1301
Query: 541 AIAAAVGSLMI 509
A+ A+ SL++
Sbjct: 1302 AVNVAISSLVL 1312
>SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003)
Length = 700
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 648 EVKSTAGDTHLGSEDFDNRMVNHFVQEFK 734
EVK T+GD + E DN + H ++ FK
Sbjct: 21 EVKITSGDKGMTKEMIDNHIKGHILEYFK 49
>SB_31875| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1478
Score = 28.3 bits (60), Expect = 7.3
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Frame = -2
Query: 691 SSLPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP*AIAAAVGSLM 512
S+LP WVS F+ +IP + + R KI+ + PF + P V S
Sbjct: 871 STLPNWVSEFRRFSPQIPVILYHGSIQERTSLRRKITKLKKAGPFETMP----VVVTSYE 926
Query: 511 IGERSSQRWYLHLLW---LVFESH 449
I + Q+ L+W +V E H
Sbjct: 927 IA-MNDQKHLFQLMWKHMIVDEGH 949
>SB_20600| Best HMM Match : zf-C3HC4 (HMM E-Value=0.65)
Length = 963
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = -3
Query: 402 KISFGSFLHFRKHHGTDF----LGEKGFVFTLICYLDLRFASITDNLERPVLHAACTVAS 235
K SF F+ F + + DF L K F+ +L Y DLR + ++ PV A C +A
Sbjct: 727 KTSFYFFVRFSETYHPDFVLQGLPSKDFLPSL--YGDLRLSLQHSVIDDPVTEAVCIIAD 784
Query: 234 SNLRPMRRLASN 199
++ +++N
Sbjct: 785 TDTWTCELISAN 796
>SB_55110| Best HMM Match : Squash (HMM E-Value=0.21)
Length = 573
Score = 27.9 bits (59), Expect = 9.7
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Frame = -3
Query: 399 ISFGSFLHFRKHHGTDFLGEKGFVFTLICYLDLRFASITDNLERPV------LHAACTVA 238
+ F L++ HGT + ++CY D FA IT + P LHA C A
Sbjct: 110 VVFPPSLNYFIAHGTCIEKNRAVNLDVLCYCDRGFAMITSLIALPCDPCVIRLHANC--A 167
Query: 237 SSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT*DGVVLLPWSLAMIS 76
S+ + + R A ++VL A FL R +++V A + +P+ L M +
Sbjct: 168 FSHYKLISR-AKDVVL---EAKAFLVQFFFRENLTVTAPLNIKFSVPFVLVMFN 217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,338,699
Number of Sequences: 59808
Number of extensions: 618674
Number of successful extensions: 2179
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2170
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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