Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30478
(531 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical p... 89 2e-18
Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical pr... 89 2e-18
Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical pr... 89 2e-18
AL031637-1|CAA21047.2| 317|Caenorhabditis elegans Hypothetical ... 28 4.8
Z81030-2|CAB02704.2| 343|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical pr... 27 8.4
U23513-3|AAB36862.1| 209|Caenorhabditis elegans Hypothetical pr... 27 8.4
>Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical
protein F28C6.7c protein.
Length = 109
Score = 89.0 bits (211), Expect = 2e-18
Identities = 42/79 (53%), Positives = 58/79 (73%)
Frame = +2
Query: 29 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 208
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 209 HYKGQQVGKVMQVYRKSLL 265
+KG G+V++ YRK +
Sbjct: 61 RHKG-NTGRVLRCYRKKFV 78
Score = 47.2 bits (107), Expect = 7e-06
Identities = 18/27 (66%), Positives = 25/27 (92%)
Frame = +1
Query: 256 KFVVYIERIQREKANGATAYVGIHPSK 336
KFV++I++I REKANG+T ++GIHPSK
Sbjct: 76 KFVIHIDKITREKANGSTVHIGIHPSK 102
>Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical
protein F28C6.7b protein.
Length = 106
Score = 89.0 bits (211), Expect = 2e-18
Identities = 42/79 (53%), Positives = 58/79 (73%)
Frame = +2
Query: 29 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 208
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 209 HYKGQQVGKVMQVYRKSLL 265
+KG G+V++ YRK +
Sbjct: 61 RHKG-NTGRVLRCYRKKFV 78
Score = 47.2 bits (107), Expect = 7e-06
Identities = 18/27 (66%), Positives = 25/27 (92%)
Frame = +1
Query: 256 KFVVYIERIQREKANGATAYVGIHPSK 336
KFV++I++I REKANG+T ++GIHPSK
Sbjct: 76 KFVIHIDKITREKANGSTVHIGIHPSK 102
>Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical
protein F28C6.7a protein.
Length = 142
Score = 89.0 bits (211), Expect = 2e-18
Identities = 42/79 (53%), Positives = 58/79 (73%)
Frame = +2
Query: 29 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 208
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 209 HYKGQQVGKVMQVYRKSLL 265
+KG G+V++ YRK +
Sbjct: 61 RHKG-NTGRVLRCYRKKFV 78
Score = 79.8 bits (188), Expect = 1e-15
Identities = 34/61 (55%), Positives = 49/61 (80%)
Frame = +1
Query: 256 KFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 435
KFV++I++I REKANG+T ++GIHPSK I KLK++KDR+A+++R+A GR G KGK
Sbjct: 76 KFVIHIDKITREKANGSTVHIGIHPSKVAITKLKLDKDRRALVERKAAGRSRVTGILKGK 135
Query: 436 Y 438
+
Sbjct: 136 H 136
>AL031637-1|CAA21047.2| 317|Caenorhabditis elegans Hypothetical
protein Y47H9B.2 protein.
Length = 317
Score = 27.9 bits (59), Expect = 4.8
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -3
Query: 472 KRPPWLWQFPRCIYPCLCQVQPVC 401
++ PW ++ +YP LC++ +C
Sbjct: 249 RKYPWYYKMSSAMYPALCELAGIC 272
>Z81030-2|CAB02704.2| 343|Caenorhabditis elegans Hypothetical
protein C01G10.2 protein.
Length = 343
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = -3
Query: 298 WPFLFESSQCIQQTFTIHLHHFANLLAFVVSTY-----NLNFIVFANRHGFYIEFLS 143
+P F ++ T +H+ ++ N + V + + N NF++F+N H YI LS
Sbjct: 124 FPLKFSWLWGLKLTLVLHILYYINRIWNVATEHLSRSENSNFMLFSNEHLAYIGLLS 180
>Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical
protein F55G7.2 protein.
Length = 383
Score = 27.1 bits (57), Expect = 8.4
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 32 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 211
KFN+ V RR N K+ P H + + +++++ + S+P K + H
Sbjct: 94 KFNEAVALFRRDNPKKQLLLPKHWDQSTCTQQVAQKITEIAKDLSVPYPKK-----LNQH 148
Query: 212 YKG 220
YKG
Sbjct: 149 YKG 151
>U23513-3|AAB36862.1| 209|Caenorhabditis elegans Hypothetical
protein D2021.8 protein.
Length = 209
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = -3
Query: 229 NLL--AFVVSTYNLNFIVFANRHGFYIEFLS*FLRQG 125
NLL A VV ++NL+ ++ A +HG ++E + L+QG
Sbjct: 11 NLLKPAVVVDSFNLHAVISATQHG-HVESVEAALKQG 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,148,144
Number of Sequences: 27780
Number of extensions: 237771
Number of successful extensions: 684
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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