BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30477 (501 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical... 29 1.9 Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr... 28 3.3 Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr... 28 3.3 Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr... 28 3.3 Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr... 28 3.3 U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical pr... 28 3.3 AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 28 3.3 AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 28 3.3 AF016450-2|AAB65983.1| 545|Caenorhabditis elegans Hypothetical ... 28 3.3 Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical pr... 28 4.4 Z79757-8|CAB02128.2| 355|Caenorhabditis elegans Hypothetical pr... 27 7.6 U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 27 7.6 >AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical protein Y47D3A.28 protein. Length = 691 Score = 29.1 bits (62), Expect = 1.9 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = +2 Query: 38 HLTETQ-KEKAKQYTSECVKESGVSTEVINAAK-TGQYSEDKAFKK 169 HLT + +EK + +T+ CV+ V N K T Q++ + KK Sbjct: 574 HLTGMEEREKVETFTTTCVEVKNVKVVTCNQCKYTSQFASSECIKK 619 >Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical protein C10C5.6b protein. Length = 1782 Score = 28.3 bits (60), Expect = 3.3 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = +2 Query: 17 NCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSEDKAFKKFVLCFFN 190 N N H + ++ A + S+CV +S V E+I A + + +K F KF+L N Sbjct: 836 NSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDFEKRFVKFLLELSN 895 Query: 191 K 193 + Sbjct: 896 Q 896 >Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical protein C10C5.6a protein. Length = 1776 Score = 28.3 bits (60), Expect = 3.3 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = +2 Query: 17 NCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSEDKAFKKFVLCFFN 190 N N H + ++ A + S+CV +S V E+I A + + +K F KF+L N Sbjct: 836 NSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDFEKRFVKFLLELSN 895 Query: 191 K 193 + Sbjct: 896 Q 896 >Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical protein C10C5.6b protein. Length = 1782 Score = 28.3 bits (60), Expect = 3.3 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = +2 Query: 17 NCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSEDKAFKKFVLCFFN 190 N N H + ++ A + S+CV +S V E+I A + + +K F KF+L N Sbjct: 836 NSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDFEKRFVKFLLELSN 895 Query: 191 K 193 + Sbjct: 896 Q 896 >Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical protein C10C5.6a protein. Length = 1776 Score = 28.3 bits (60), Expect = 3.3 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = +2 Query: 17 NCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSEDKAFKKFVLCFFN 190 N N H + ++ A + S+CV +S V E+I A + + +K F KF+L N Sbjct: 836 NSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDFEKRFVKFLLELSN 895 Query: 191 K 193 + Sbjct: 896 Q 896 >U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical protein F57F4.2 protein. Length = 327 Score = 28.3 bits (60), Expect = 3.3 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3 Query: 178 KHEFLKSFIFGVLSSLRCIYHF 113 K+EFLKS I L +L C+ HF Sbjct: 231 KNEFLKSHIHSKLRNLMCMLHF 252 >AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. Length = 1800 Score = 28.3 bits (60), Expect = 3.3 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = +2 Query: 17 NCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSEDKAFKKFVLCFFN 190 N N H + ++ A + S+CV +S V E+I A + + +K F KF+L N Sbjct: 860 NSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDFEKRFVKFLLELSN 919 Query: 191 K 193 + Sbjct: 920 Q 920 >AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical protein Y11D7A.14 protein. Length = 1464 Score = 28.3 bits (60), Expect = 3.3 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +2 Query: 83 ECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKSAIL 205 +CV SGV E + A+T S F KF+ F++++ L Sbjct: 203 DCVVTSGVLLEAMGNARTTHNSNSSRFGKFIRIEFDENSKL 243 >AF016450-2|AAB65983.1| 545|Caenorhabditis elegans Hypothetical protein B0238.1 protein. Length = 545 Score = 28.3 bits (60), Expect = 3.3 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +1 Query: 259 VNKSEAQSVLEQCKDKTGQDAADKAFEIFQCYY 357 V K ++ LE +DK+G+ K EIF YY Sbjct: 367 VVKKAVEAYLENIEDKSGEKIGKKLVEIFGDYY 399 >Z77659-5|CAB01168.1| 953|Caenorhabditis elegans Hypothetical protein F23B12.7 protein. Length = 953 Score = 27.9 bits (59), Expect = 4.4 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = +1 Query: 211 RWYT-EHGCCASKTSSGVNKSEAQSVLEQCKDKTGQDAA 324 +WY+ + + + +N SE Q +LE+ KD+ QDAA Sbjct: 101 KWYSYQIDHVHDEKTEKMNASEIQKLLEEGKDEMAQDAA 139 >Z79757-8|CAB02128.2| 355|Caenorhabditis elegans Hypothetical protein F55B12.7 protein. Length = 355 Score = 27.1 bits (57), Expect = 7.6 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +1 Query: 208 LRWYTEHGCCASKTSSGVN 264 L+W E G CA SSG+N Sbjct: 207 LQWIPEEGKCAETVSSGIN 225 >U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor 4e (eif4e) familyprotein 2 protein. Length = 228 Score = 27.1 bits (57), Expect = 7.6 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +1 Query: 217 YTEHGCCASKTSSGVNKSEAQSVLEQCKDK 306 Y +H C KTSSGV A +E ++K Sbjct: 184 YEDHESCQKKTSSGVKAKHAIYAVEPREEK 213 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,965,869 Number of Sequences: 27780 Number of extensions: 187557 Number of successful extensions: 573 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 545 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 573 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 956602620 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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