Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30477
         (501 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117202-22|CAB57900.1|  691|Caenorhabditis elegans Hypothetical...    29   1.9  
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr...    28   3.3  
U70856-1|AAB09165.1|  327|Caenorhabditis elegans Hypothetical pr...    28   3.3  
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.     28   3.3  
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ...    28   3.3  
AF016450-2|AAB65983.1|  545|Caenorhabditis elegans Hypothetical ...    28   3.3  
Z77659-5|CAB01168.1|  953|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z79757-8|CAB02128.2|  355|Caenorhabditis elegans Hypothetical pr...    27   7.6  
U41550-3|AAA83286.1|  228|Caenorhabditis elegans Initiation fact...    27   7.6  

>AL117202-22|CAB57900.1|  691|Caenorhabditis elegans Hypothetical
           protein Y47D3A.28 protein.
          Length = 691

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +2

Query: 38  HLTETQ-KEKAKQYTSECVKESGVSTEVINAAK-TGQYSEDKAFKK 169
           HLT  + +EK + +T+ CV+   V     N  K T Q++  +  KK
Sbjct: 574 HLTGMEEREKVETFTTTCVEVKNVKVVTCNQCKYTSQFASSECIKK 619


>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical protein
            C10C5.6b protein.
          Length = 1782

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +2

Query: 17   NCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSEDKAFKKFVLCFFN 190
            N    N H +  ++  A +  S+CV +S   V  E+I A +   +  +K F KF+L   N
Sbjct: 836  NSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDFEKRFVKFLLELSN 895

Query: 191  K 193
            +
Sbjct: 896  Q 896


>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical protein
            C10C5.6a protein.
          Length = 1776

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +2

Query: 17   NCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSEDKAFKKFVLCFFN 190
            N    N H +  ++  A +  S+CV +S   V  E+I A +   +  +K F KF+L   N
Sbjct: 836  NSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDFEKRFVKFLLELSN 895

Query: 191  K 193
            +
Sbjct: 896  Q 896


>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical protein
            C10C5.6b protein.
          Length = 1782

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +2

Query: 17   NCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSEDKAFKKFVLCFFN 190
            N    N H +  ++  A +  S+CV +S   V  E+I A +   +  +K F KF+L   N
Sbjct: 836  NSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDFEKRFVKFLLELSN 895

Query: 191  K 193
            +
Sbjct: 896  Q 896


>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical protein
            C10C5.6a protein.
          Length = 1776

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +2

Query: 17   NCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSEDKAFKKFVLCFFN 190
            N    N H +  ++  A +  S+CV +S   V  E+I A +   +  +K F KF+L   N
Sbjct: 836  NSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDFEKRFVKFLLELSN 895

Query: 191  K 193
            +
Sbjct: 896  Q 896


>U70856-1|AAB09165.1|  327|Caenorhabditis elegans Hypothetical
           protein F57F4.2 protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 178 KHEFLKSFIFGVLSSLRCIYHF 113
           K+EFLKS I   L +L C+ HF
Sbjct: 231 KNEFLKSHIHSKLRNLMCMLHF 252


>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
          Length = 1800

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +2

Query: 17   NCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSEDKAFKKFVLCFFN 190
            N    N H +  ++  A +  S+CV +S   V  E+I A +   +  +K F KF+L   N
Sbjct: 860  NSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDFEKRFVKFLLELSN 919

Query: 191  K 193
            +
Sbjct: 920  Q 920


>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
           protein Y11D7A.14 protein.
          Length = 1464

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 83  ECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKSAIL 205
           +CV  SGV  E +  A+T   S    F KF+   F++++ L
Sbjct: 203 DCVVTSGVLLEAMGNARTTHNSNSSRFGKFIRIEFDENSKL 243


>AF016450-2|AAB65983.1|  545|Caenorhabditis elegans Hypothetical
           protein B0238.1 protein.
          Length = 545

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 259 VNKSEAQSVLEQCKDKTGQDAADKAFEIFQCYY 357
           V K   ++ LE  +DK+G+    K  EIF  YY
Sbjct: 367 VVKKAVEAYLENIEDKSGEKIGKKLVEIFGDYY 399


>Z77659-5|CAB01168.1|  953|Caenorhabditis elegans Hypothetical
           protein F23B12.7 protein.
          Length = 953

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 211 RWYT-EHGCCASKTSSGVNKSEAQSVLEQCKDKTGQDAA 324
           +WY+ +      + +  +N SE Q +LE+ KD+  QDAA
Sbjct: 101 KWYSYQIDHVHDEKTEKMNASEIQKLLEEGKDEMAQDAA 139


>Z79757-8|CAB02128.2|  355|Caenorhabditis elegans Hypothetical
           protein F55B12.7 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 208 LRWYTEHGCCASKTSSGVN 264
           L+W  E G CA   SSG+N
Sbjct: 207 LQWIPEEGKCAETVSSGIN 225


>U41550-3|AAA83286.1|  228|Caenorhabditis elegans Initiation factor
           4e (eif4e) familyprotein 2 protein.
          Length = 228

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 217 YTEHGCCASKTSSGVNKSEAQSVLEQCKDK 306
           Y +H  C  KTSSGV    A   +E  ++K
Sbjct: 184 YEDHESCQKKTSSGVKAKHAIYAVEPREEK 213


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,965,869
Number of Sequences: 27780
Number of extensions: 187557
Number of successful extensions: 573
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)