Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30476
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-1|CAB60842.2| 132|Caenorhabditis elegans Hypothetical ... 51 7e-07
Z82264-6|CAB05157.1| 214|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical... 31 1.1
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 30 2.0
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 2.0
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 2.0
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 2.0
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 2.0
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 29 2.6
AF125955-4|AAO12428.1| 181|Caenorhabditis elegans Hypothetical ... 29 3.4
AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical ... 29 3.4
>AL132876-1|CAB60842.2| 132|Caenorhabditis elegans Hypothetical
protein Y105E8A.1 protein.
Length = 132
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +2
Query: 248 RFLQNNAKSSGGTVSDPNPRSPLPPQMFNDEEYCGDYDQFDLANEVDTLEQFLKL 412
RF++ NA G PN + LPPQ F ++EY GDY+ FD + E DT+ +FL+L
Sbjct: 50 RFMRENASKKG-----PNG-AVLPPQFFYEDEYLGDYEDFDTSVEADTITEFLRL 98
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3
Query: 111 VKIYISGISGNKEVKKRQQRVLMILDSKNIKYEVIDITEPGRESDKDFCK 260
+K+Y++ + N E K R QR LMILD I ++ IDIT+P + F +
Sbjct: 4 LKVYVASATANPETKYRVQRTLMILDGLGIPFDSIDITKPEHAEQRRFMR 53
>Z82264-6|CAB05157.1| 214|Caenorhabditis elegans Hypothetical
protein C49C3.12 protein.
Length = 214
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 120 YISGISGNKEVKKRQQRVLMILDSKNIK 203
++SGI N E + +++ L ILD KNIK
Sbjct: 56 HLSGIESNSEKRYVEEQTLSILDDKNIK 83
>AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical
protein Y105E8B.7 protein.
Length = 269
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 514 TTAEKAENDEADTIETSEKVKETSPVKENSPXXXXXXXXXXATPVP-VDNEVQEDVAKQG 690
T KA D S K+ + +PVKE P+P +D E+++ K+
Sbjct: 138 TKKRKASLISNDEKSPSRKMHKITPVKEEESSQKMSKSKEKGVPIPKIDIEIEKASPKKE 197
Query: 691 SPEKEASPD 717
EK SP+
Sbjct: 198 KKEKVKSPE 206
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 511 ETTAEKAENDEADTIETSEKVKETSPVKENS 603
E EK E +T+E + VKET+PVK+ +
Sbjct: 45 EEEVEKMEEGVEETMENASVVKETTPVKDEN 75
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 505 RTETTAEKAENDEADTIETSEKVKETSPVKENSPXXXXXXXXXXATPVPV-DNEVQEDVA 681
+ + + EK+ +E + EK E K SP A+P +NEV+
Sbjct: 1544 KKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTK 1603
Query: 682 KQGSPEKEASPDLQN 726
K+ SPEK +L++
Sbjct: 1604 KEKSPEKSVVEELKS 1618
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +1
Query: 502 PRTETTAEKA-ENDEADTIETSEKVKETSPVKENSPXXXXXXXXXXATPVPV-DNEVQED 675
P++ T EK+ E A+ +++ K KE SP K ++ ++PV + D+EV+
Sbjct: 1734 PKSPTKKEKSPEKSAAEEVKSPTK-KEKSPEK-SAEEKPKSPTKKESSPVKMADDEVKSP 1791
Query: 676 VAKQGSPEK 702
K+ SPEK
Sbjct: 1792 TKKEKSPEK 1800
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 505 RTETTAEKAENDEADTIETSEKVKETSPVKENSPXXXXXXXXXXATPVPV-DNEVQEDVA 681
+ + + EK+ +E + EK E K SP A+P +NEV+
Sbjct: 1544 KKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTK 1603
Query: 682 KQGSPEKEASPDLQN 726
K+ SPEK +L++
Sbjct: 1604 KEKSPEKSVVEELKS 1618
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +1
Query: 502 PRTETTAEKA-ENDEADTIETSEKVKETSPVKENSPXXXXXXXXXXATPVPV-DNEVQED 675
P++ T EK+ E A+ +++ K KE SP K ++ ++PV + D+EV+
Sbjct: 1734 PKSPTKKEKSPEKSAAEEVKSPTK-KEKSPEK-SAEEKPKSPTKKESSPVKMADDEVKSP 1791
Query: 676 VAKQGSPEK 702
K+ SPEK
Sbjct: 1792 TKKEKSPEK 1800
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 505 RTETTAEKAENDEADTIETSEKVKETSPVKENSPXXXXXXXXXXATPVPV-DNEVQEDVA 681
+ + + EK+ +E + EK E K SP A+P +NEV+
Sbjct: 1544 KKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTK 1603
Query: 682 KQGSPEKEASPDLQN 726
K+ SPEK +L++
Sbjct: 1604 KEKSPEKSVVEELKS 1618
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +1
Query: 502 PRTETTAEKA-ENDEADTIETSEKVKETSPVKENSPXXXXXXXXXXATPVPV-DNEVQED 675
P++ T EK+ E A+ +++ K KE SP K ++ ++PV + D+EV+
Sbjct: 1734 PKSPTKKEKSPEKSAAEEVKSPTK-KEKSPEK-SAEEKPKSPTKKESSPVKMADDEVKSP 1791
Query: 676 VAKQGSPEK 702
K+ SPEK
Sbjct: 1792 TKKEKSPEK 1800
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 505 RTETTAEKAENDEADTIETSEKVKETSPVKENSPXXXXXXXXXXATPVPV-DNEVQEDVA 681
+ + + EK+ +E + EK E K SP A+P +NEV+
Sbjct: 1544 KKDKSPEKSITEEIKSPVKKEKSPEKVEEKPASPTKKEKSPEKPASPTKKSENEVKSPTK 1603
Query: 682 KQGSPEKEASPDLQN 726
K+ SPEK +L++
Sbjct: 1604 KEKSPEKSVVEELKS 1618
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +1
Query: 502 PRTETTAEKA-ENDEADTIETSEKVKETSPVKENSPXXXXXXXXXXATPVPV-DNEVQED 675
P++ T EK+ E A+ +++ K KE SP K ++ ++PV + D+EV+
Sbjct: 1734 PKSPTKKEKSPEKSAAEEVKSPTK-KEKSPEK-SAEEKPKSPTKKESSPVKMADDEVKSP 1791
Query: 676 VAKQGSPEK 702
K+ SPEK
Sbjct: 1792 TKKEKSPEK 1800
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/70 (25%), Positives = 26/70 (37%)
Frame = +1
Query: 505 RTETTAEKAENDEADTIETSEKVKETSPVKENSPXXXXXXXXXXATPVPVDNEVQEDVAK 684
+ ETT E + T T+ TSP K +S TPV N +
Sbjct: 208 KNETTDEATSSPPTTTTPTTTLKPTTSPQKPDSTEEATSPSQSTTTPVATQNPTTSNQKN 267
Query: 685 QGSPEKEASP 714
+ + E +SP
Sbjct: 268 ETTDEATSSP 277
>AF125955-4|AAO12428.1| 181|Caenorhabditis elegans Hypothetical
protein F46E10.10c protein.
Length = 181
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 101 KHGCQNLYQWHFWQQGGEETSAAGPDD 181
K C +++ WHF + G+ S A P D
Sbjct: 94 KAACDHIHDWHFGTKAGQFVSMAVPSD 120
>AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical
protein F46E10.10a protein.
Length = 336
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 101 KHGCQNLYQWHFWQQGGEETSAAGPDD 181
K C +++ WHF + G+ S A P D
Sbjct: 249 KAACDHIHDWHFGTKAGQFVSMAVPSD 275
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,906,017
Number of Sequences: 27780
Number of extensions: 235797
Number of successful extensions: 749
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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