Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30475
         (716 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0129 + 41243686-41243853,41243936-41244053,41245485-412455...    92   5e-19
01_07_0130 + 41262652-41262798,41262958-41263056,41263155-412632...    78   6e-15
12_02_1237 + 27245411-27245842                                         32   0.52 
09_06_0311 + 22218219-22218421,22219157-22219422,22219881-222200...    32   0.52 
02_01_0178 - 1223725-1223736,1223900-1224025,1224404-1224649,122...    29   4.9  
02_01_0314 + 2106976-2107658,2107792-2107931,2108367-2108636,210...    28   8.5  
01_06_0257 + 27932119-27932187,27932371-27932470,27932560-279326...    28   8.5  

>01_07_0129 +
           41243686-41243853,41243936-41244053,41245485-41245532,
           41245756-41245787
          Length = 121

 Score = 91.9 bits (218), Expect = 5e-19
 Identities = 37/57 (64%), Positives = 49/57 (85%)
 Frame = +1

Query: 7   LPLLYYLSGLTCSEQNFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGV 177
           LP+LY+LSGLTC+++NF+TK+G QR AA HG+ +V PDTSPRG+ I+G+  SWDFGV
Sbjct: 55  LPVLYWLSGLTCNDENFVTKAGAQRAAAAHGIALVAPDTSPRGLNIEGEADSWDFGV 111


>01_07_0130 +
           41262652-41262798,41262958-41263056,41263155-41263220,
           41264073-41264255
          Length = 164

 Score = 78.2 bits (184), Expect = 6e-15
 Identities = 32/61 (52%), Positives = 47/61 (77%)
 Frame = +2

Query: 530 LLLDQGSGDKFYLEKQLLPENLVEACRSVGVPVILQLRDGYDHSYYYISTYIGEHFDFHA 709
           +L+DQG  DKF L KQLLP N  EAC++VG P+ L+++ GYDHSY++I+T+I +H   H+
Sbjct: 100 ILIDQGEDDKF-LAKQLLPRNFEEACKAVGAPLTLRMQPGYDHSYFFIATFIDDHIAHHS 158

Query: 710 K 712
           +
Sbjct: 159 Q 159



 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 34/55 (61%), Positives = 40/55 (72%)
 Frame = +3

Query: 342 ALVSTLRNPGQYKSVSAFAPICNPSACPWGVKAFSGYLGEDKSKWAEWDATELVK 506
           AL   L+N  +YKSVSAF+P+ NP  CPWG KAFS YLG  KS W E+DAT L+K
Sbjct: 37  ALTIYLKNTDKYKSVSAFSPVVNPINCPWGQKAFSNYLGPAKSDWKEYDATCLIK 91


>12_02_1237 + 27245411-27245842
          Length = 143

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +1

Query: 160 SWDFGVSAGFYLDATNEPWNNN 225
           ++DFG+ AGF++  TN P+N +
Sbjct: 42  AYDFGIPAGFFVPGTNNPYNGD 63


>09_06_0311 + 22218219-22218421,22219157-22219422,22219881-22220050,
            22220149-22220365,22220798-22221021,22221559-22221738,
            22221875-22222013,22222107-22222255,22223394-22223505,
            22223998-22224506,22224661-22224784,22224904-22225178,
            22225507-22225626,22225707-22225769,22225861-22226052,
            22226381-22226440,22226535-22226738,22226926-22227051,
            22227093-22227254,22227357-22227476,22227665-22227820,
            22227895-22227957,22228041-22228168,22228524-22228920,
            22229442-22229544,22229646-22229776,22230096-22230167,
            22230472-22230553,22231083-22231190,22231288-22231429,
            22231659-22231698,22231746-22231876,22232215-22232301,
            22232395-22232605,22232687-22232741,22232836-22232927,
            22233011-22233071,22233361-22233719
          Length = 2010

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 160  SWDFGVSAGFYLDATNEPWNNNYRMGSYLN 249
            SW +G+  G Y +  N PW +N    +++N
Sbjct: 1287 SWQYGLDQGLYSEGKNYPWFSNGSSNAFIN 1316


>02_01_0178 -
           1223725-1223736,1223900-1224025,1224404-1224649,
           1224731-1224922,1225059-1225138,1225233-1226826
          Length = 749

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 459 EDKSKWAEWD-ATELVKNTMDLLL 527
           EDKS W  W+ +TE  K  +DLLL
Sbjct: 672 EDKSLWRSWEGSTEPCKKILDLLL 695


>02_01_0314 +
           2106976-2107658,2107792-2107931,2108367-2108636,
           2109938-2110254
          Length = 469

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 157 SSWDFGVSAGFYLDATNEPWN 219
           SSWD  V  GF   AT  PW+
Sbjct: 297 SSWDNPVPGGFKFTATKAPWS 317


>01_06_0257 +
           27932119-27932187,27932371-27932470,27932560-27932666,
           27933619-27933621,27933833-27933866,27934081-27934229,
           27934676-27934822,27935019-27935129,27935548-27935647,
           27936115-27936165,27937297-27937334,27937448-27937540,
           27937744-27937827,27939101-27939262
          Length = 415

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -1

Query: 623 GLLQNGMLPPNSQEVTASLNK-IYHHF 546
           GLLQNG + P  +E+  + NK ++ H+
Sbjct: 100 GLLQNGSITPAREEIRMNFNKLVFAHY 126


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,913,873
Number of Sequences: 37544
Number of extensions: 417661
Number of successful extensions: 900
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)