Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30475
(716 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118729-1|AAM50589.1| 286|Drosophila melanogaster GH03475p pro... 118 6e-27
AE014297-2761|AAF55741.1| 286|Drosophila melanogaster CG4390-PA... 118 6e-27
AE014297-2760|AAN13821.2| 330|Drosophila melanogaster CG4390-PB... 118 6e-27
AY128454-1|AAM75047.1| 1018|Drosophila melanogaster LP08082p pro... 31 1.2
AF245516-1|AAF73427.1| 1018|Drosophila melanogaster Ran binding ... 31 1.2
AE014297-1291|AAF54632.1| 1018|Drosophila melanogaster CG5252-PA... 31 1.2
U73846-1|AAB61993.1| 808|Drosophila melanogaster testis-specifi... 29 8.4
>AY118729-1|AAM50589.1| 286|Drosophila melanogaster GH03475p
protein.
Length = 286
Score = 118 bits (285), Expect = 6e-27
Identities = 49/79 (62%), Positives = 65/79 (82%)
Frame = +1
Query: 10 PLLYYLSGLTCSEQNFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGF 189
P+L++LSGLTC+ +NFI KSGFQ++AA H +IVV PDTSPRGV+I G D ++DFG AGF
Sbjct: 47 PVLFFLSGLTCTHENFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGF 106
Query: 190 YLDATNEPWNNNYRMGSYL 246
Y+DA EPW+ +Y+M SY+
Sbjct: 107 YVDAKEEPWSKHYKMYSYV 125
Score = 87.0 bits (206), Expect = 2e-17
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = +3
Query: 342 ALVSTLRNPGQYKSVSAFAPICNPSACPWGVKAFSGYLGEDKSKWAEWDATELV 503
AL+ L+NPG Y+SVSAFAPI NP+ CPWG KAF+GYLG + WA WDAT LV
Sbjct: 156 ALICALKNPGLYQSVSAFAPIANPTECPWGKKAFAGYLGSNPDDWALWDATHLV 209
Score = 74.1 bits (174), Expect = 2e-13
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +2
Query: 506 EYNGPPLTLLLDQGSGDKFYLEKQLLPENLVEACRSVG-VPVILQLRDGYDHSYYYISTY 682
+Y P L +DQG+ D F KQLLPENL+ A + I + R+GYDHSY+YI+T+
Sbjct: 211 QYESTPQELFIDQGAADNFLAGKQLLPENLLAAADGNDHIQTIFKQREGYDHSYFYIATF 270
Query: 683 IGEHFDFHAKI 715
+ EH +HA +
Sbjct: 271 VAEHIAYHAAL 281
>AE014297-2761|AAF55741.1| 286|Drosophila melanogaster CG4390-PA,
isoform A protein.
Length = 286
Score = 118 bits (285), Expect = 6e-27
Identities = 49/79 (62%), Positives = 65/79 (82%)
Frame = +1
Query: 10 PLLYYLSGLTCSEQNFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGF 189
P+L++LSGLTC+ +NFI KSGFQ++AA H +IVV PDTSPRGV+I G D ++DFG AGF
Sbjct: 47 PVLFFLSGLTCTHENFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGF 106
Query: 190 YLDATNEPWNNNYRMGSYL 246
Y+DA EPW+ +Y+M SY+
Sbjct: 107 YVDAKEEPWSKHYKMYSYV 125
Score = 87.0 bits (206), Expect = 2e-17
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = +3
Query: 342 ALVSTLRNPGQYKSVSAFAPICNPSACPWGVKAFSGYLGEDKSKWAEWDATELV 503
AL+ L+NPG Y+SVSAFAPI NP+ CPWG KAF+GYLG + WA WDAT LV
Sbjct: 156 ALICALKNPGLYQSVSAFAPIANPTECPWGKKAFAGYLGSNPDDWALWDATHLV 209
Score = 74.1 bits (174), Expect = 2e-13
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +2
Query: 506 EYNGPPLTLLLDQGSGDKFYLEKQLLPENLVEACRSVG-VPVILQLRDGYDHSYYYISTY 682
+Y P L +DQG+ D F KQLLPENL+ A + I + R+GYDHSY+YI+T+
Sbjct: 211 QYESTPQELFIDQGAADNFLAGKQLLPENLLAAADGNDHIQTIFKQREGYDHSYFYIATF 270
Query: 683 IGEHFDFHAKI 715
+ EH +HA +
Sbjct: 271 VAEHIAYHAAL 281
>AE014297-2760|AAN13821.2| 330|Drosophila melanogaster CG4390-PB,
isoform B protein.
Length = 330
Score = 118 bits (285), Expect = 6e-27
Identities = 49/79 (62%), Positives = 65/79 (82%)
Frame = +1
Query: 10 PLLYYLSGLTCSEQNFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGF 189
P+L++LSGLTC+ +NFI KSGFQ++AA H +IVV PDTSPRGV+I G D ++DFG AGF
Sbjct: 91 PVLFFLSGLTCTHENFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGF 150
Query: 190 YLDATNEPWNNNYRMGSYL 246
Y+DA EPW+ +Y+M SY+
Sbjct: 151 YVDAKEEPWSKHYKMYSYV 169
Score = 87.0 bits (206), Expect = 2e-17
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = +3
Query: 342 ALVSTLRNPGQYKSVSAFAPICNPSACPWGVKAFSGYLGEDKSKWAEWDATELV 503
AL+ L+NPG Y+SVSAFAPI NP+ CPWG KAF+GYLG + WA WDAT LV
Sbjct: 200 ALICALKNPGLYQSVSAFAPIANPTECPWGKKAFAGYLGSNPDDWALWDATHLV 253
Score = 74.1 bits (174), Expect = 2e-13
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +2
Query: 506 EYNGPPLTLLLDQGSGDKFYLEKQLLPENLVEACRSVG-VPVILQLRDGYDHSYYYISTY 682
+Y P L +DQG+ D F KQLLPENL+ A + I + R+GYDHSY+YI+T+
Sbjct: 255 QYESTPQELFIDQGAADNFLAGKQLLPENLLAAADGNDHIQTIFKQREGYDHSYFYIATF 314
Query: 683 IGEHFDFHAKI 715
+ EH +HA +
Sbjct: 315 VAEHIAYHAAL 325
>AY128454-1|AAM75047.1| 1018|Drosophila melanogaster LP08082p
protein.
Length = 1018
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +3
Query: 492 TELVKNTMDLLLHYY*IREVVINFI*RSSYFLRIWWKHAVL*ESPSFCNYAMDMITPIIT 671
+ ++ N MD L+HY + ++ + ++++ H V E P + N MD + PI+
Sbjct: 229 SSILTNFMDKLMHYLSMNSGAVSSFLLRTEIIKVF-THLVN-EMPKYINPFMDRVLPIVW 286
Query: 672 YLLTLV 689
LLT +
Sbjct: 287 QLLTQI 292
>AF245516-1|AAF73427.1| 1018|Drosophila melanogaster Ran binding
protein 9 protein.
Length = 1018
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +3
Query: 492 TELVKNTMDLLLHYY*IREVVINFI*RSSYFLRIWWKHAVL*ESPSFCNYAMDMITPIIT 671
+ ++ N MD L+HY + ++ + ++++ H V E P + N MD + PI+
Sbjct: 229 SSILTNFMDKLMHYLSMNSGAVSSFLLRTEIIKVF-THLVN-EMPKYINPFMDRVLPIVW 286
Query: 672 YLLTLV 689
LLT +
Sbjct: 287 QLLTQI 292
>AE014297-1291|AAF54632.1| 1018|Drosophila melanogaster CG5252-PA
protein.
Length = 1018
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +3
Query: 492 TELVKNTMDLLLHYY*IREVVINFI*RSSYFLRIWWKHAVL*ESPSFCNYAMDMITPIIT 671
+ ++ N MD L+HY + ++ + ++++ H V E P + N MD + PI+
Sbjct: 229 SSILTNFMDKLMHYLSMNSGAVSSFLLRTEIIKVF-THLVN-EMPKYINPFMDRVLPIVW 286
Query: 672 YLLTLV 689
LLT +
Sbjct: 287 QLLTQI 292
>U73846-1|AAB61993.1| 808|Drosophila melanogaster testis-specific
RNP-type RNA bindingprotein protein.
Length = 808
Score = 28.7 bits (61), Expect = 8.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 190 KNRH*LQNPMMNHLHQS*LHVAKYQDLRQLHHVRLH 83
K+ H LQ+ +H HQ H A +Q +QLHH + H
Sbjct: 95 KSSHSLQHHHSHH-HQLQRHTALHQQQQQLHHHQPH 129
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,195,727
Number of Sequences: 53049
Number of extensions: 714025
Number of successful extensions: 1585
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1582
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -