Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30475
         (716 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132847-5|CAB60384.2|  280|Caenorhabditis elegans Hypothetical ...   122   3e-28
AL110500-23|CAB63414.1|  280|Caenorhabditis elegans Hypothetical...   122   3e-28
Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z36752-1|CAA85323.2|  150|Caenorhabditis elegans Hypothetical pr...    28   5.8  

>AL132847-5|CAB60384.2|  280|Caenorhabditis elegans Hypothetical
           protein Y48G10A.1 protein.
          Length = 280

 Score =  122 bits (293), Expect = 3e-28
 Identities = 51/81 (62%), Positives = 64/81 (79%)
 Frame = +1

Query: 4   KLPLLYYLSGLTCSEQNFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSA 183
           KLP L+YLSGLTC+  NF+ KSGFQ++A++H ++VV PDTSPRGV +DGD  SWDFG  A
Sbjct: 44  KLPALFYLSGLTCTHANFMEKSGFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGA 103

Query: 184 GFYLDATNEPWNNNYRMGSYL 246
           GFY++AT E W  NYRM  Y+
Sbjct: 104 GFYVNATVEKWAKNYRMYDYI 124



 Score = 75.4 bits (177), Expect = 4e-14
 Identities = 33/56 (58%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
 Frame = +3

Query: 342 ALVSTLRNPGQYKSVSAFAPICNPSACPWGVKAFSGYLG-EDKSKWAEWDATELVK 506
           AL   LRN  +++S+SAFAPICNP   PWG KA +GYLG EDKS W ++DA+E++K
Sbjct: 156 ALTIGLRNSSKFQSISAFAPICNPITVPWGQKALTGYLGDEDKSTWNQYDASEVLK 211



 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 26/69 (37%), Positives = 44/69 (63%)
 Frame = +2

Query: 509 YNGPPLTLLLDQGSGDKFYLEKQLLPENLVEACRSVGVPVILQLRDGYDHSYYYISTYIG 688
           Y+GP   +L+DQG+ D F    QL PE L          ++++++  +DHSYY+I++++ 
Sbjct: 213 YSGPKREILVDQGAADNFLA--QLKPETLKS---KENAEIVVRMQAEFDHSYYFIASFMA 267

Query: 689 EHFDFHAKI 715
           +HF+ HAKI
Sbjct: 268 DHFEHHAKI 276


>AL110500-23|CAB63414.1|  280|Caenorhabditis elegans Hypothetical
           protein Y48G10A.1 protein.
          Length = 280

 Score =  122 bits (293), Expect = 3e-28
 Identities = 51/81 (62%), Positives = 64/81 (79%)
 Frame = +1

Query: 4   KLPLLYYLSGLTCSEQNFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSA 183
           KLP L+YLSGLTC+  NF+ KSGFQ++A++H ++VV PDTSPRGV +DGD  SWDFG  A
Sbjct: 44  KLPALFYLSGLTCTHANFMEKSGFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGA 103

Query: 184 GFYLDATNEPWNNNYRMGSYL 246
           GFY++AT E W  NYRM  Y+
Sbjct: 104 GFYVNATVEKWAKNYRMYDYI 124



 Score = 75.4 bits (177), Expect = 4e-14
 Identities = 33/56 (58%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
 Frame = +3

Query: 342 ALVSTLRNPGQYKSVSAFAPICNPSACPWGVKAFSGYLG-EDKSKWAEWDATELVK 506
           AL   LRN  +++S+SAFAPICNP   PWG KA +GYLG EDKS W ++DA+E++K
Sbjct: 156 ALTIGLRNSSKFQSISAFAPICNPITVPWGQKALTGYLGDEDKSTWNQYDASEVLK 211



 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 26/69 (37%), Positives = 44/69 (63%)
 Frame = +2

Query: 509 YNGPPLTLLLDQGSGDKFYLEKQLLPENLVEACRSVGVPVILQLRDGYDHSYYYISTYIG 688
           Y+GP   +L+DQG+ D F    QL PE L          ++++++  +DHSYY+I++++ 
Sbjct: 213 YSGPKREILVDQGAADNFLA--QLKPETLKS---KENAEIVVRMQAEFDHSYYFIASFMA 267

Query: 689 EHFDFHAKI 715
           +HF+ HAKI
Sbjct: 268 DHFEHHAKI 276


>Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical
           protein F49C12.5b protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -1

Query: 617 LQNGMLPPNSQEVTASLNKIYHHFPDLVV 531
           L+N M+ PN Q++ A L  I H++ DLVV
Sbjct: 381 LENMMMKPNIQKIFAQLPDI-HYYTDLVV 408


>Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical
           protein F49C12.5a protein.
          Length = 507

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -1

Query: 617 LQNGMLPPNSQEVTASLNKIYHHFPDLVV 531
           L+N M+ PN Q++ A L  I H++ DLVV
Sbjct: 408 LENMMMKPNIQKIFAQLPDI-HYYTDLVV 435


>Z36752-1|CAA85323.2|  150|Caenorhabditis elegans Hypothetical
           protein F35H8.1 protein.
          Length = 150

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 23/77 (29%), Positives = 34/77 (44%)
 Frame = +1

Query: 22  YLSGLTCSEQNFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDA 201
           YLS L C    FI   G +R A E   +++  +   + + +D  ++   F VS  F  D 
Sbjct: 3   YLSNLLCLTLTFIVCFGAERDADEEAYVLM--NLLKQSIDMDQTEALPGF-VSRDFTYDT 59

Query: 202 TNEPWNNNYRMGSYLNV 252
               WN +  M  YL V
Sbjct: 60  CKGIWNRDKYM-EYLKV 75


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,122,214
Number of Sequences: 27780
Number of extensions: 362695
Number of successful extensions: 889
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)