Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30473X
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.4  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   5.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   5.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.5  

>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 198 SLHCSSTLWASDLLTPGGSLLAQHPCSVYHL 290
           S+H  S     DL+T GG  L +   ++ H+
Sbjct: 61  SVHFISRTLGQDLITTGGYTLPKESNAIIHI 91


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 228  KPKAY*NSARIRPGKT 181
            KPK Y  SA + P KT
Sbjct: 1552 KPKGYLLSAAVSPSKT 1567


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -1

Query: 489 VPNSARDNVHLTETQKEKAKQYTSECV 409
           +P   +   HL + +K +AK+  S+C+
Sbjct: 101 LPGKTKMIAHLKDKKKIRAKKRWSQCM 127


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -1

Query: 489 VPNSARDNVHLTETQKEKAKQYTSECV 409
           +P   +   HL + +K +AK+  S+C+
Sbjct: 415 LPGKTKMIAHLKDKKKIRAKKRWSQCM 441


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -1

Query: 489 VPNSARDNVHLTETQKEKAKQYTSECV 409
           +P   +   HL + +K +AK+  S+C+
Sbjct: 648 LPGKTKMIAHLKDKKKIRAKKRWSQCM 674


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -1

Query: 489 VPNSARDNVHLTETQKEKAKQYTSECV 409
           +P   +   HL + +K +AK+  S+C+
Sbjct: 648 LPGKTKMIAHLKDKKKIRAKKRWSQCM 674


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 341 ALSSEYCPVFAAFITSVLTPDSLTHSE 421
           AL  +Y P   AF+ +   PDS+   E
Sbjct: 191 ALKIKYNPFAKAFLDAKERPDSIYQRE 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,019
Number of Sequences: 336
Number of extensions: 2583
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)