Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30472
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68128-1|CAA92213.1|  946|Homo sapiens C1 protein.                     31   3.0  
X78817-1|CAA55394.1|  946|Homo sapiens p115 protein.                   31   3.0  
D50921-1|BAA09480.1|  942|Homo sapiens KIAA0131 protein.               31   3.0  
BC052303-1|AAH52303.1|  986|Homo sapiens ARHGAP4 protein protein.      31   3.0  
BC023626-1|AAH23626.1|  356|Homo sapiens ARHGAP4 protein protein.      31   3.0  

>Z68128-1|CAA92213.1|  946|Homo sapiens C1 protein.
          Length = 946

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -2

Query: 169 APDESLDGFIDAVEAYKECANVSETIALRGLSMLLTHEAAT--WWQG 35
           A ++ L+G ++AV  +      ++ ++ R   +L  HE A+  WW+G
Sbjct: 740 AQEDDLEGVVEAVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRG 786


>X78817-1|CAA55394.1|  946|Homo sapiens p115 protein.
          Length = 946

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -2

Query: 169 APDESLDGFIDAVEAYKECANVSETIALRGLSMLLTHEAAT--WWQG 35
           A ++ L+G ++AV  +      ++ ++ R   +L  HE A+  WW+G
Sbjct: 740 AQEDDLEGVVEAVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRG 786


>D50921-1|BAA09480.1|  942|Homo sapiens KIAA0131 protein.
          Length = 942

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -2

Query: 169 APDESLDGFIDAVEAYKECANVSETIALRGLSMLLTHEAAT--WWQG 35
           A ++ L+G ++AV  +      ++ ++ R   +L  HE A+  WW+G
Sbjct: 736 AQEDDLEGVVEAVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRG 782


>BC052303-1|AAH52303.1|  986|Homo sapiens ARHGAP4 protein protein.
          Length = 986

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -2

Query: 169 APDESLDGFIDAVEAYKECANVSETIALRGLSMLLTHEAAT--WWQG 35
           A ++ L+G ++AV  +      ++ ++ R   +L  HE A+  WW+G
Sbjct: 780 AQEDDLEGVVEAVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRG 826


>BC023626-1|AAH23626.1|  356|Homo sapiens ARHGAP4 protein protein.
          Length = 356

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -2

Query: 169 APDESLDGFIDAVEAYKECANVSETIALRGLSMLLTHEAAT--WWQG 35
           A ++ L+G ++AV  +      ++ ++ R   +L  HE A+  WW+G
Sbjct: 150 AQEDDLEGVVEAVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRG 196


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,044,050
Number of Sequences: 237096
Number of extensions: 1593649
Number of successful extensions: 3631
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3631
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)