Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30472
         (704 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119191-1|AAM51051.1|  193|Drosophila melanogaster SD11637p pro...    66   4e-11
AE013599-1878|AAF58254.1|  193|Drosophila melanogaster CG13941-P...    66   4e-11
AY061464-1|AAL29012.1|  254|Drosophila melanogaster LD41905p pro...    61   2e-09
AE013599-1876|AAF58256.1|  254|Drosophila melanogaster CG12505-P...    61   2e-09

>AY119191-1|AAM51051.1|  193|Drosophila melanogaster SD11637p
           protein.
          Length = 193

 Score = 66.1 bits (154), Expect = 4e-11
 Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 GNFASCKARYSGAPD-ESLDGFIDAVEAYKECANVSETIALRGLSMLLTHEAATWWQGVK 29
           G+F++C  R+SG  D +++D FI+AVE YKE   +S+  AL+GL +L    A  WW+GV+
Sbjct: 30  GSFSNCTVRFSGQRDHDAVDEFINAVETYKEVEGISDKDALKGLPLLFKSIAVVWWKGVR 89

Query: 28  TTMNKWDHA 2
                W  A
Sbjct: 90  RDAKTWSDA 98


>AE013599-1878|AAF58254.1|  193|Drosophila melanogaster CG13941-PA
           protein.
          Length = 193

 Score = 66.1 bits (154), Expect = 4e-11
 Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 GNFASCKARYSGAPD-ESLDGFIDAVEAYKECANVSETIALRGLSMLLTHEAATWWQGVK 29
           G+F++C  R+SG  D +++D FI+AVE YKE   +S+  AL+GL +L    A  WW+GV+
Sbjct: 30  GSFSNCTVRFSGQRDHDAVDEFINAVETYKEVEGISDKDALKGLPLLFKSIAVVWWKGVR 89

Query: 28  TTMNKWDHA 2
                W  A
Sbjct: 90  RDAKTWSDA 98


>AY061464-1|AAL29012.1|  254|Drosophila melanogaster LD41905p
           protein.
          Length = 254

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 GNFASCKARYSGAPDESL-DGFIDAVEAYKECANVSETIALRGLSMLLTHEAATWWQGVK 29
           GNF++C   + G  D  + + FI  +E YK+   +S+  AL+G+S+L    A+TWWQGV+
Sbjct: 43  GNFSACTHSFGGTRDHDVVEEFIGNIETYKDVEGISDENALKGISLLFYGMASTWWQGVR 102

Query: 28  TTMNKWDHA 2
                W  A
Sbjct: 103 KEATTWKEA 111


>AE013599-1876|AAF58256.1|  254|Drosophila melanogaster CG12505-PA
           protein.
          Length = 254

 Score = 60.9 bits (141), Expect = 2e-09
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 GNFASCKARYSGAPDESL-DGFIDAVEAYKECANVSETIALRGLSMLLTHEAATWWQGVK 29
           GNF++C   + G  D  + + FI  +E YK+   +S+  AL+G+S+L    A+TWWQGV+
Sbjct: 43  GNFSACTHSFGGTRDHDVVEEFIGNIETYKDVEGISDENALKGISLLFYGMASTWWQGVR 102

Query: 28  TTMNKWDHA 2
                W  A
Sbjct: 103 KEATTWKEA 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,768,659
Number of Sequences: 53049
Number of extensions: 498348
Number of successful extensions: 1612
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1604
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)