Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30471
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       27   0.57 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   3.1  
AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskele...    23   9.4  
AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative cytoskel...    23   9.4  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 27.1 bits (57), Expect = 0.57
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 516 LHPCCDSLRLYC 551
           L PCC+ LRLYC
Sbjct: 71  LDPCCEILRLYC 82


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -3

Query: 221  RPSRHQRTSLEPGSMLPVATTLNATVERNSPLRGSTTLDPES 96
            R +  Q   ++P   L  A ++  TVE + P   +T L+PES
Sbjct: 1463 REATAQLPPVQPPETLTPAGSVAITVEPSVPPATTTDLEPES 1504


>AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskeletal
           regulator protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = -2

Query: 582 QQTTVI--IRNKNNTIVNCHNMDATVSW 505
           +Q TV+  I    +T+VN +N+    SW
Sbjct: 97  KQVTVVSSISRSRSTVVNSYNLTTCPSW 124


>AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative
           cytoskeletal regulator protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = -2

Query: 582 QQTTVI--IRNKNNTIVNCHNMDATVSW 505
           +Q TV+  I    +T+VN +N+    SW
Sbjct: 97  KQVTVVSSISRSRSTVVNSYNLTTCPSW 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,081
Number of Sequences: 2352
Number of extensions: 13381
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)