Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30471
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015258-1|AAT94487.1|  928|Drosophila melanogaster LP04418p pro...    33   0.29 
AY061294-1|AAL28842.1|  422|Drosophila melanogaster LD20624p pro...    33   0.29 
AF213376-1|AAF34825.1|  928|Drosophila melanogaster naked cuticl...    33   0.29 
AE014296-3098|AAF49198.3|  928|Drosophila melanogaster CG11614-P...    33   0.29 

>BT015258-1|AAT94487.1|  928|Drosophila melanogaster LP04418p
           protein.
          Length = 928

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -3

Query: 224 QRPSRHQRTSLEPGSMLPVATTLNATVERNSPLRGS-TTLDPESFSVPA 81
           Q+P + QR     GS +P   T ++ V + SPL  S  T +P + S+PA
Sbjct: 589 QQPQQQQRQRCNTGSKIPTLITNHSPVAQQSPLSCSPPTAEPTTPSIPA 637


>AY061294-1|AAL28842.1|  422|Drosophila melanogaster LD20624p
           protein.
          Length = 422

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -3

Query: 224 QRPSRHQRTSLEPGSMLPVATTLNATVERNSPLRGS-TTLDPESFSVPA 81
           Q+P + QR     GS +P   T ++ V + SPL  S  T +P + S+PA
Sbjct: 83  QQPQQQQRQRCNTGSKIPTLITNHSPVAQQSPLSCSPPTAEPTTPSIPA 131


>AF213376-1|AAF34825.1|  928|Drosophila melanogaster naked cuticle
           protein.
          Length = 928

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -3

Query: 224 QRPSRHQRTSLEPGSMLPVATTLNATVERNSPLRGS-TTLDPESFSVPA 81
           Q+P + QR     GS +P   T ++ V + SPL  S  T +P + S+PA
Sbjct: 589 QQPQQQQRQRCNTGSKIPTLITNHSPVAQQSPLSCSPPTAEPTTPSIPA 637


>AE014296-3098|AAF49198.3|  928|Drosophila melanogaster CG11614-PA
           protein.
          Length = 928

 Score = 33.5 bits (73), Expect = 0.29
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -3

Query: 224 QRPSRHQRTSLEPGSMLPVATTLNATVERNSPLRGS-TTLDPESFSVPA 81
           Q+P + QR     GS +P   T ++ V + SPL  S  T +P + S+PA
Sbjct: 589 QQPQQQQRQRCNTGSKIPTLITNHSPVAQQSPLSCSPPTAEPTTPSIPA 637


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,312,628
Number of Sequences: 53049
Number of extensions: 586857
Number of successful extensions: 1600
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)