Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30469
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.75 
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    24   1.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.0  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   4.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   4.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.0  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.3  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +3

Query: 54  MVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPN 197
           +  + R+    L  G GF+K  E E  L     RH++    C  + P+
Sbjct: 608 VTSLNREEIKRLDNGVGFLKVKENEITLLVATVRHVMAPSTCQPQNPD 655


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 121 SANLMKPKPLDSPVRVSRFT*TISKSPKEEK*SRTASS 8
           +ANL++P P  SP+  S    T S+  K  +    ASS
Sbjct: 104 AANLLRPHPYLSPLFHSAAPRTASRETKSSESDSGASS 141


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 187  RTSHQRPSIMCRRPNARS 134
            R S  RPS+  R PN ++
Sbjct: 1432 RVSQARPSVQLRYPNGKA 1449


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 187  RTSHQRPSIMCRRPNARS 134
            R S  RPS+  R PN ++
Sbjct: 1432 RVSQARPSVQLRYPNGKA 1449


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 310 ICHLTKGAEVLSEIFGCNI 254
           IC L +G +++++IFG  I
Sbjct: 211 ICLLKEGVDLVNDIFGWQI 229


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 304 HLTKGAEVLSEIFGCNISV 248
           HL+K  ++ +E+FG ++ V
Sbjct: 232 HLSKSVKLFNEVFGVSLLV 250


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 310 ICHLTKGAEVLSEIFGCNI 254
           IC L +G +++++IFG  I
Sbjct: 211 ICLLKEGVDLVNDIFGWQI 229


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 304 HLTKGAEVLSEIFGCNISV 248
           HL+K  ++ +E+FG ++ V
Sbjct: 250 HLSKSVKLFNEVFGVSLLV 268


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 617 NLKAINNVGLWRTGGTVYS 561
           NLK +  +G W  G   YS
Sbjct: 95  NLKTLIAIGGWNEGSETYS 113


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 617 NLKAINNVGLWRTGGTV 567
           NLK I ++G W  G  +
Sbjct: 95  NLKTIISIGGWNAGNAI 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,910
Number of Sequences: 336
Number of extensions: 3798
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)