Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30469
(679 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 54 9e-08
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 54 9e-08
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 51 7e-07
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 51 7e-07
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 51 7e-07
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 50 2e-06
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 50 2e-06
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 45 6e-05
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 45 6e-05
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 45 6e-05
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 44 8e-05
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 44 8e-05
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 44 8e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 42 5e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 42 5e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 39 0.004
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 37 0.015
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 36 0.020
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 36 0.027
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 36 0.027
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 36 0.027
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 36 0.027
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 36 0.027
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 36 0.035
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 36 0.035
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 35 0.046
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 35 0.046
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 34 0.081
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 34 0.11
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 33 0.14
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 33 0.14
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 33 0.25
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 33 0.25
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 33 0.25
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 32 0.33
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 32 0.33
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 32 0.33
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 31 0.57
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 31 0.57
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 31 0.76
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 31 1.00
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 31 1.00
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 31 1.00
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 31 1.00
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 31 1.00
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 31 1.00
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 31 1.00
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 31 1.00
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 31 1.00
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 29 3.0
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 29 3.0
AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical ... 29 3.0
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 29 3.0
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 29 3.0
Z81043-8|CAB02804.2| 550|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL023813-2|CAA19424.2| 550|Caenorhabditis elegans Hypothetical ... 29 4.0
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 28 5.3
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 28 5.3
U61237-1|AAB17542.1| 550|Caenorhabditis elegans M89 protein. 28 5.3
AC024817-24|AAF59584.3| 237|Caenorhabditis elegans C-type lecti... 28 5.3
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 28 7.0
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 28 7.0
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 28 7.0
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 27 9.3
U10402-11|AAA19063.2| 434|Caenorhabditis elegans Gro-1 operon g... 27 9.3
AY052771-1|AAL14110.1| 434|Caenorhabditis elegans GOP-3 protein. 27 9.3
AC006775-2|AAF60621.2| 557|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 70.1 bits (164), Expect = 1e-12
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG-RRHMIDGRWC 179
TT+E + YF G ++ ++KR + G SKGFGF++ + Q + L +HMIDGR C
Sbjct: 184 TTDECFQKYFEDIGTVVFCEIKRKS-DGNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRC 242
Query: 180 DVRIPNGKDGSS-TAHRKVFVGRCTE 254
DV++P+G+D + ++FVGR T+
Sbjct: 243 DVKVPDGRDKQGRPSISRIFVGRLTD 268
Score = 57.2 bits (132), Expect = 1e-08
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = +2
Query: 203 GRLVDGSSKGIRRPLYGDITAEDLREYFGSFGQVTDVFVPRPFRAFSFVTFLDPEVARSL 382
GRL D + R ++GD + + Y + VTDVF+P+PFR F+FVT E A +
Sbjct: 264 GRLTDKVDEHQLRKVFGD----EAKSYIET-AVVTDVFIPKPFRGFAFVTLSSAEAAERI 318
Query: 383 CGQDHI-IKGVSVNISTASPKRERSTTAASGLGWGRMLGWPADHGHSRHPIPSSQSPTSN 559
+ + + G+SV +S A P+ E + + G G PA + + R + P N
Sbjct: 319 VSKGSLTVNGLSVGLSIAQPREENNQSV------GPDYGLPAGYRNRRERDRPDRRPIQN 372
Query: 560 TSKLCLLF 583
+ L + F
Sbjct: 373 EAPLPMPF 380
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 54.0 bits (124), Expect = 9e-08
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWC 179
TT E +RDYF FG++ V RD T ++GFGFI F + + + L R H +DG+
Sbjct: 56 TTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKI 115
Query: 180 DVRIPNGKDGSS---TAHRKVFVG 242
D ++ K + T +KVF+G
Sbjct: 116 DPKVAFPKRTQAKLVTKTKKVFIG 139
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Frame = +2
Query: 260 TAEDLREYFGSFGQVTDVFVPRP-----FRAFSFVTFLDP-EVARSLCGQDHIIKGVSVN 421
TAE+LR+YFG FG+V + V R R F F+TF+DP V + L ++H + G ++
Sbjct: 57 TAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKID 116
Query: 422 ISTASPKRERS 454
A PKR ++
Sbjct: 117 PKVAFPKRTQA 127
Score = 45.6 bits (103), Expect = 3e-05
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Frame = +2
Query: 179 RCSHPER-QGRLVDGSSKGIRRPLYGDITAEDLREYFGSFGQVTDVFV-----PRPFRAF 340
+ + P+R Q +LV + K L T ED+++YF ++G+V D + + R F
Sbjct: 118 KVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGF 177
Query: 341 SFVTFLDPEVARSLCG-QDHIIKGVSVNISTASPK 442
FVTF EVA +C H I G V A PK
Sbjct: 178 GFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG-RRHMIDGRWC 179
+T E ++ YF ++G + + D T +GFGF+ F E + H I+G+
Sbjct: 145 STLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMV 204
Query: 180 DVRIPNGKD 206
+ + K+
Sbjct: 205 ECKKAQPKE 213
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 54.0 bits (124), Expect = 9e-08
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWC 179
TT E +RDYF FG++ V RD T ++GFGFI F + + + L R H +DG+
Sbjct: 56 TTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKI 115
Query: 180 DVRIPNGKDGSS---TAHRKVFVG 242
D ++ K + T +KVF+G
Sbjct: 116 DPKVAFPKRTQAKLVTKTKKVFIG 139
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Frame = +2
Query: 260 TAEDLREYFGSFGQVTDVFVPRP-----FRAFSFVTFLDP-EVARSLCGQDHIIKGVSVN 421
TAE+LR+YFG FG+V + V R R F F+TF+DP V + L ++H + G ++
Sbjct: 57 TAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKID 116
Query: 422 ISTASPKRERS 454
A PKR ++
Sbjct: 117 PKVAFPKRTQA 127
Score = 45.6 bits (103), Expect = 3e-05
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Frame = +2
Query: 179 RCSHPER-QGRLVDGSSKGIRRPLYGDITAEDLREYFGSFGQVTDVFV-----PRPFRAF 340
+ + P+R Q +LV + K L T ED+++YF ++G+V D + + R F
Sbjct: 118 KVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGF 177
Query: 341 SFVTFLDPEVARSLCG-QDHIIKGVSVNISTASPK 442
FVTF EVA +C H I G V A PK
Sbjct: 178 GFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG-RRHMIDGRWC 179
+T E ++ YF ++G + + D T +GFGF+ F E + H I+G+
Sbjct: 145 STLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMV 204
Query: 180 DVRIPNGKD 206
+ + K+
Sbjct: 205 ECKKAQPKE 213
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA-EYEAQLRALGRRHMIDGRWC 179
TT++ +R+++S FG++ + V RD T S+GFGF+ F+ + E R H+IDG+
Sbjct: 34 TTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTV 93
Query: 180 DVRIPNGKDGSSTAHRKVFVGR 245
D + +D + + V R
Sbjct: 94 DPKRAVPRDDKNRSESNVSTKR 115
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA-QLRALGRRHMIDGRWCD 182
TE+ + +YF+ +G + ++ D T +GFGF+ F ++++ L + HM++G CD
Sbjct: 126 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 185
Query: 183 VRIPNGKDGSSTA 221
VR KD S A
Sbjct: 186 VRKGLSKDEMSKA 198
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Frame = +2
Query: 260 TAEDL-REYFGSFGQVTDVFVPRP-----FRAFSFVTFL-DPEVARSLCGQDHIIKGVSV 418
T +DL RE++ FG++TD+ V R R F FVTF EV ++ + HII G +V
Sbjct: 34 TTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTV 93
Query: 419 NISTASPKRERSTTAAS 469
+ A P+ +++ + ++
Sbjct: 94 DPKRAVPRDDKNRSESN 110
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA-EYEAQLRALGRRHMIDGRWC 179
TT++ +R+++S FG++ + V RD T S+GFGF+ F+ + E R H+IDG+
Sbjct: 34 TTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTV 93
Query: 180 DVRIPNGKDGSSTAHRKVFVGR 245
D + +D + + V R
Sbjct: 94 DPKRAVPRDDKNRSESNVSTKR 115
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA-QLRALGRRHMIDGRWCD 182
TE+ + +YF+ +G + ++ D T +GFGF+ F ++++ L + HM++G CD
Sbjct: 126 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 185
Query: 183 VRIPNGKDGSSTA 221
VR KD S A
Sbjct: 186 VRKGLSKDEMSKA 198
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Frame = +2
Query: 260 TAEDL-REYFGSFGQVTDVFVPRP-----FRAFSFVTFL-DPEVARSLCGQDHIIKGVSV 418
T +DL RE++ FG++TD+ V R R F FVTF EV ++ + HII G +V
Sbjct: 34 TTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTV 93
Query: 419 NISTASPKRERSTTAAS 469
+ A P+ +++ + ++
Sbjct: 94 DPKRAVPRDDKNRSESN 110
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA-EYEAQLRALGRRHMIDGRWC 179
TT++ +R+++S FG++ + V RD T S+GFGF+ F+ + E R H+IDG+
Sbjct: 34 TTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTV 93
Query: 180 DVRIPNGKDGSSTAHRKVFVGR 245
D + +D + + V R
Sbjct: 94 DPKRAVPRDDKNRSESNVSTKR 115
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA-QLRALGRRHMIDGRWCD 182
TE+ + +YF+ +G + ++ D T +GFGF+ F ++++ L + HM++G CD
Sbjct: 126 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 185
Query: 183 VRIPNGKDGSSTA 221
VR KD S A
Sbjct: 186 VRKGLSKDEMSKA 198
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Frame = +2
Query: 260 TAEDL-REYFGSFGQVTDVFVPRP-----FRAFSFVTFL-DPEVARSLCGQDHIIKGVSV 418
T +DL RE++ FG++TD+ V R R F FVTF EV ++ + HII G +V
Sbjct: 34 TTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTV 93
Query: 419 NISTASPKRERSTTAAS 469
+ A P+ +++ + ++
Sbjct: 94 DPKRAVPRDDKNRSESN 110
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA-QLRALGRRHMIDGRWCD 182
TE+ + +YF+ +G + ++ D T +GFGF+ F ++++ L + HM++G CD
Sbjct: 88 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 147
Query: 183 VRIPNGKDGSSTA 221
VR KD S A
Sbjct: 148 VRKGLSKDEMSKA 160
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 18 VRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA-EYEAQLRALGRRHMIDGRWCDVRIP 194
+R+++S FG++ + V RD T S+GFGF+ F+ + E R H+IDG+ D +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 195 NGKDGSSTAHRKVFVGR 245
+D + + V R
Sbjct: 61 VPRDDKNRSESNVSTKR 77
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Frame = +2
Query: 272 LREYFGSFGQVTDVFVPRP-----FRAFSFVTFL-DPEVARSLCGQDHIIKGVSVNISTA 433
+RE++ FG++TD+ V R R F FVTF EV ++ + HII G +V+ A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 434 SPKRERSTTAAS 469
P+ +++ + ++
Sbjct: 61 VPRDDKNRSESN 72
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA-QLRALGRRHMIDGRWCD 182
TE+ + +YF+ +G + ++ D T +GFGF+ F ++++ L + HM++G CD
Sbjct: 88 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 147
Query: 183 VRIPNGKDGSSTA 221
VR KD S A
Sbjct: 148 VRKGLSKDEMSKA 160
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +3
Query: 18 VRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA-EYEAQLRALGRRHMIDGRWCDVRIP 194
+R+++S FG++ + V RD T S+GFGF+ F+ + E R H+IDG+ D +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 195 NGKDGSSTAHRKVFVGR 245
+D + + V R
Sbjct: 61 VPRDDKNRSESNVSTKR 77
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Frame = +2
Query: 272 LREYFGSFGQVTDVFVPRP-----FRAFSFVTFL-DPEVARSLCGQDHIIKGVSVNISTA 433
+RE++ FG++TD+ V R R F FVTF EV ++ + HII G +V+ A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 434 SPKRERSTTAAS 469
P+ +++ + ++
Sbjct: 61 VPRDDKNRSESN 72
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMV-QVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
E+ + D FS+FG +L V ++ RD +G SKGF FI FA +EA AL
Sbjct: 113 EKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTAL 159
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMV-QVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
E+ + D FS+FG +L V ++ RD +G SKGF FI FA +EA AL
Sbjct: 123 EKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTAL 169
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 12 EAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYE-AQLRALGRRHMIDGRWCDVR 188
E + +F+ +G++ QVK D G S+GF F++F E +L R I G+ +V
Sbjct: 43 EDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEV- 101
Query: 189 IPNGKDGSSTAHRKVFVG 242
K S ++KVFVG
Sbjct: 102 ----KPAKSRENKKVFVG 115
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDG-RWCD 182
+E+ +R +F FG + ++ D +T + F FI F E E+ +A + G R CD
Sbjct: 122 SEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECD 181
Query: 183 VR--IPNGK 203
V+ +P GK
Sbjct: 182 VKKAVPQGK 190
Score = 33.1 bits (72), Expect = 0.19
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = +2
Query: 245 LYGDITAEDLREYFGSFGQVTDVFVP-----RPFRAFSFVTFLDPEVARSLCGQDHIIKG 409
L D + +DLR +F FG+V D+ P + R F+F+ F + E A Q G
Sbjct: 117 LPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFG 176
Query: 410 V-SVNISTASPKRERSTTAASGLGWGR 487
++ A P+ +R A + GR
Sbjct: 177 TRECDVKKAVPQGKRFPGAQGRMPGGR 203
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +3
Query: 12 EAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYE-AQLRALGRRHMIDGRWCDVR 188
E + +F+ +G++ QVK D G S+GF F++F E +L R I G+ +V
Sbjct: 43 EDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEV- 101
Query: 189 IPNGKDGSSTAHRKVFVG 242
K S ++KVFVG
Sbjct: 102 ----KPAKSRENKKVFVG 115
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDG-RWCD 182
+E+ +R +F FG + ++ D +T + F FI F E E+ +A + G R CD
Sbjct: 122 SEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECD 181
Query: 183 VR--IPNGK 203
V+ +P GK
Sbjct: 182 VKKAVPQGK 190
Score = 33.1 bits (72), Expect = 0.19
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = +2
Query: 245 LYGDITAEDLREYFGSFGQVTDVFVP-----RPFRAFSFVTFLDPEVARSLCGQDHIIKG 409
L D + +DLR +F FG+V D+ P + R F+F+ F + E A Q G
Sbjct: 117 LPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFG 176
Query: 410 V-SVNISTASPKRERSTTAASGLGWGR 487
++ A P+ +R A + GR
Sbjct: 177 TRECDVKKAVPQGKRFPGAQGRMPGGR 203
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE-YEAQLRALGRRHMIDGRWC 179
TT+E + +YFS +G ++ V RD T S+GFGF+ FA + A+ R H + G+
Sbjct: 60 TTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTV 119
Query: 180 D 182
D
Sbjct: 120 D 120
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE-YEAQLRALGRRHMIDGRWC 179
TT+E + +YFS +G ++ V RD T S+GFGF+ FA + A+ R H + G+
Sbjct: 80 TTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTV 139
Query: 180 D 182
D
Sbjct: 140 D 140
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE-YEAQLRALGRRHMIDGRWC 179
TT+E + +YFS +G ++ V RD T S+GFGF+ FA + A+ R H + G+
Sbjct: 81 TTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKLGGKTV 140
Query: 180 D 182
D
Sbjct: 141 D 141
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
TTEE + ++FSS G + V++ D TG +GF FI+FAE + RA+
Sbjct: 16 TTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/55 (36%), Positives = 34/55 (61%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMID 167
TTE+ + +YFS G++ V++ D TG +GF F++F E A RA+ + + +D
Sbjct: 15 TTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNGVD 69
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +3
Query: 12 EAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRW 176
+ +R+ F FGD+ +V RDT T SKG+GF+ + + E RA+ ++G+W
Sbjct: 36 QKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI---EQMNGQW 87
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDV 185
TE+ +R F+SFG + V++ + +G+ F+KF +A +A+ + + D V
Sbjct: 139 TEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 192
Query: 186 RIPNGKDGSS 215
R GK G +
Sbjct: 193 RCSWGKTGDT 202
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +3
Query: 12 EAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRW 176
+ +R+ F FGD+ +V RDT T SKG+GF+ + + E RA+ ++G+W
Sbjct: 46 QKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI---EQMNGQW 97
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDV 185
TE+ +R F+SFG + V++ + +G+ F+KF +A +A+ + + D V
Sbjct: 149 TEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 202
Query: 186 RIPNGKDGSS 215
R GK G +
Sbjct: 203 RCSWGKTGDT 212
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +3
Query: 12 EAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRW 176
+ +R+ F FGD+ +V RDT T SKG+GF+ + + E RA+ ++G+W
Sbjct: 149 QKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI---EQMNGQW 200
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDV 185
TE+ +R F+SFG + V++ + +G+ F+KF +A +A+ + + D V
Sbjct: 252 TEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 305
Query: 186 RIPNGKDGSS 215
R GK G +
Sbjct: 306 RCSWGKTGDT 315
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +3
Query: 12 EAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRW 176
+ +R+ F FGD+ +V RDT T SKG+GF+ + + E RA+ ++G+W
Sbjct: 117 QKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI---EQMNGQW 168
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDV 185
TE+ +R F+SFG + V++ + +G+ F+KF +A +A+ + + D V
Sbjct: 220 TEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 273
Query: 186 RIPNGKDGSS 215
R GK G +
Sbjct: 274 RCSWGKTGDT 283
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
T+E VR F+S G++ ++ RD TG S G+GF+ + E LRA+
Sbjct: 54 TQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAV 100
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 116
T + F FG ++ ++ D TGLSKG GF++F
Sbjct: 140 TLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRF 176
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRR--HMIDGR 173
TT +R F +GD+ V + RD + SKGFGF++F E AL R ++DGR
Sbjct: 30 TTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGR 88
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Frame = +2
Query: 260 TAEDLREYFGSFGQVTDVFVP-----RPFRAFSFVTFLDPEVARSLCGQ--DHIIKGVSV 418
T DLR F +G + DV +P R + F FV F + A + ++ G +
Sbjct: 31 TPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGREL 90
Query: 419 NISTASPKRERSTTAASGLGWGR 487
++ A R G G GR
Sbjct: 91 RVTLAKYDRPSDERGGRGGGGGR 113
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRR--HMIDGR 173
TT +R F +GD+ V + RD + SKGFGF++F E AL R ++DGR
Sbjct: 30 TTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGR 88
Score = 31.9 bits (69), Expect = 0.43
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 8/111 (7%)
Frame = +2
Query: 260 TAEDLREYFGSFGQVTDVFVP-----RPFRAFSFVTFLDPEVARSLCGQ--DHIIKGVSV 418
T DLR F +G + DV +P R + F FV F + A + ++ G +
Sbjct: 31 TPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGREL 90
Query: 419 NISTASPKRERSTTAASGLGWGRMLGWPADHGHSRHPIPS-SQSPTSNTSK 568
++ A R G G GR + SR P S S+SP + S+
Sbjct: 91 RVTLAKYDRPSDERGGRGGGGGRRRS-RSPRRRSRSPRYSRSRSPRRSRSR 140
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYE 128
+E+ +R FS G++L +++ D TG KG+GFI+F + +
Sbjct: 30 SEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
E+ +RD F G ++ + + RD TGL KGF F+ F + RA+
Sbjct: 189 EDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAI 234
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Frame = +2
Query: 254 DITAEDLREYFGSFGQVTDVFVPRPF-----RAFSFVTF 355
++ ++LR+ FG G+V +F+ R + F+FVTF
Sbjct: 186 EMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTF 224
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
TEE + +YF++ G + V++ D TG +GF F++F+E RA+
Sbjct: 18 TEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAV 64
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GRRHMIDGRWC 179
T+++ + +YF FGD+ V D T S+G+GF+ + + RA +IDGR
Sbjct: 46 TSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPIIDGRKA 105
Query: 180 DVRI 191
+V +
Sbjct: 106 NVNL 109
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWC 179
T + + YF +G + V + D TGL +GF I F + +A+ +R H+IDG
Sbjct: 36 TGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRV 95
Query: 180 DV 185
DV
Sbjct: 96 DV 97
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
++ +RD+FSSFG + +V D G SKGFGF+ F + E A+
Sbjct: 356 DDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAV 400
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH--MIDGRWCD 182
+E + FS FG++ V D + G KGFGF+ FA+ +A +A+ + + +++G C
Sbjct: 251 QEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCK 309
Query: 183 VRI 191
+ +
Sbjct: 310 LSV 312
Score = 34.7 bits (76), Expect = 0.061
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 12 EAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF-AEYEAQ 134
++V D FS FG++L +V D G SKG+GF+ F E+ AQ
Sbjct: 159 KSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQ 199
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
++ +RD+FSSFG + +V D G SKGFGF+ F + E A+
Sbjct: 356 DDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAV 400
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH--MIDGRWCD 182
+E + FS FG++ V D + G KGFGF+ FA+ +A +A+ + + +++G C
Sbjct: 251 QEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCK 309
Query: 183 VRI 191
+ +
Sbjct: 310 LSV 312
Score = 34.7 bits (76), Expect = 0.061
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 12 EAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF-AEYEAQ 134
++V D FS FG++L +V D G SKG+GF+ F E+ AQ
Sbjct: 159 KSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQ 199
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 116
TTE+ +RD F FG++ + D +G S+GFGFI F
Sbjct: 87 TTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
Score = 34.3 bits (75), Expect = 0.081
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Frame = +2
Query: 260 TAEDLREYFGSFGQVT--DVFVPRP---FRAFSFVTF---LDPEVAR-SLCGQDHIIKGV 412
T +DLR+ FG FG++ D+ RP R F F+ F D AR LC D + G
Sbjct: 88 TEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTD--LDGH 145
Query: 413 SVNISTASPKRERSTTAASGLG 478
+ + + KR S T +G
Sbjct: 146 KIRVDFSLTKRGHSPTPGQYMG 167
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDV 185
+ E ++ F+ FG++ +V RD +T SKG+GF+ F + A+ ++G+W
Sbjct: 147 SNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAG---MNGKWIGK 203
Query: 186 R 188
R
Sbjct: 204 R 204
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
TT+ +RD FS++GD+ V++ + R + F+++ + E +A+
Sbjct: 248 TTDADLRDLFSTYGDIAEVRIFKTQR------YAFVRYEKKECATKAI 289
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRA 143
TE+ V D FS +G + + + D RTG KG+ + EYE Q A
Sbjct: 67 TEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALV---EYETQKEA 109
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRW 176
++E + F + +V R++RT SKG+GF+ F + E +RA+ R M DG++
Sbjct: 215 SDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAM--REM-DGKY 268
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3
Query: 12 EAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
+++ D FS FG++L +V D G SKG+GF+ F EA A+
Sbjct: 134 KSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAI 177
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH 158
+E + F+ FG++ +V T G SKGFGF+ FA E A+ H
Sbjct: 226 KETLEKVFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALH 273
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
++ ++ F S+G++ +V D G SKGFGF+ F + E A+
Sbjct: 330 DDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAV 374
Score = 29.5 bits (63), Expect = 2.3
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = +2
Query: 248 YGD-ITAEDLREYFGSFGQVTD---VFVPRPFRAFSFVTFLDPEVARSLCG--QDHIIKG 409
+GD E L + F FG +T + V + F FV F +PE A + D I+G
Sbjct: 220 FGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEG 279
Query: 410 --VSVNISTASPKRER 451
+ +++ A K ER
Sbjct: 280 TDLKLHVCRAQKKSER 295
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 214 DEPSLPFGMRTSHQRPSIMCRRPNARS*ASYSANLMKPKPLDSP 83
+EP G++TS Q PS +RP+ A S+N++ P P +P
Sbjct: 1465 NEPDQTTGLKTSQQPPSFAAKRPSFGRQAQSSSNVIPPAPAPTP 1508
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 214 DEPSLPFGMRTSHQRPSIMCRRPNARS*ASYSANLMKPKPLDSP 83
+EP G++TS Q PS +RP+ A S+N++ P P +P
Sbjct: 1465 NEPDQTTGLKTSQQPPSFAAKRPSFGRQAQSSSNVIPPAPAPTP 1508
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3
Query: 12 EAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
+++ D FS FG++L +V D G SKG+GF+ F EA A+
Sbjct: 71 KSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAI 114
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH 158
+E + F+ FG++ +V T G SKGFGF+ FA E A+ H
Sbjct: 163 KETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALH 210
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
++ ++ F S+G++ +V D G SKGFGF+ F + E A+
Sbjct: 267 DDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAV 311
Score = 29.5 bits (63), Expect = 2.3
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = +2
Query: 248 YGD-ITAEDLREYFGSFGQVTD---VFVPRPFRAFSFVTFLDPEVARSLCG--QDHIIKG 409
+GD E L + F FG +T + V + F FV F +PE A + D I+G
Sbjct: 157 FGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEG 216
Query: 410 --VSVNISTASPKRER 451
+ +++ A K ER
Sbjct: 217 TDLKLHVCRAQKKSER 232
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3
Query: 12 EAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
+++ D FS FG++L +V D G SKG+GF+ F EA A+
Sbjct: 134 KSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAI 177
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH 158
+E + F+ FG++ +V T G SKGFGF+ FA E A+ H
Sbjct: 226 KETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALH 273
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
++ ++ F S+G++ +V D G SKGFGF+ F + E A+
Sbjct: 330 DDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAV 374
Score = 29.5 bits (63), Expect = 2.3
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = +2
Query: 248 YGD-ITAEDLREYFGSFGQVTD---VFVPRPFRAFSFVTFLDPEVARSLCG--QDHIIKG 409
+GD E L + F FG +T + V + F FV F +PE A + D I+G
Sbjct: 220 FGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEG 279
Query: 410 --VSVNISTASPKRER 451
+ +++ A K ER
Sbjct: 280 TDLKLHVCRAQKKSER 295
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 35.5 bits (78), Expect = 0.035
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRA 143
T E+ ++ F +G++ VQV D +TG KGF ++F EA + A
Sbjct: 290 TKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAA 336
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Frame = +2
Query: 260 TAEDLREYFGSFGQVTDVFVPRP----FRAFSFVTFLD 361
T + LR++F +GQ++D + FR F+FV FLD
Sbjct: 15 TEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLD 52
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 35.5 bits (78), Expect = 0.035
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 116
E+ + YF FG++L ++V R+ RTG KG+ ++ F
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGF 80
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 35.1 bits (77), Expect = 0.046
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 116
TE+ + F FGD++ + + D +G +GFGF++F
Sbjct: 23 TEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 35.1 bits (77), Expect = 0.046
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 18 VRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRW 176
+R+ F FG++ ++ RD T KG+GF+ + E RA+ ++G W
Sbjct: 148 LREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDE---MNGAW 197
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 34.3 bits (75), Expect = 0.081
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +2
Query: 245 LYGDITAEDLREYFGSFGQVTDVFVPRPFRAFSFVTFLD----PEVARSLCGQDHIIKGV 412
L D T+++L E F FG++ V+V R F+FV + D + R+L G I GV
Sbjct: 10 LPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR--ICGV 67
Query: 413 SVNISTASPKRERSTTAASGLGWGRMLGWPADHGHSRHPIPSS 541
+ ++ +R G G+G G D G PS+
Sbjct: 68 RARVELSTGQRRGG--GGRGGGFGGRGGGGRDSGLRSSASPSA 108
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 30 FSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
FS +G+++ + + RD TG SKGF F+ + + + + A+
Sbjct: 58 FSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAV 96
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 245 LYGDITAEDLREYFGSFGQVTDVFVPRPFRAFSFVTFLD----PEVARSLCGQDHIIKGV 412
L D T+++L E F FG++ V+V R F+FV + D + R+L G I GV
Sbjct: 10 LPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR--ICGV 67
Query: 413 SVNISTASPKRERSTTAASGLG 478
+ ++ +R G G
Sbjct: 68 RARVELSTGQRRGGGGRGGGFG 89
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 245 LYGDITAEDLREYFGSFGQVTDVFVPRPFRAFSFVTFLD----PEVARSLCGQDHIIKGV 412
L D T+++L E F FG++ V+V R F+FV + D + R+L G I GV
Sbjct: 10 LPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR--ICGV 67
Query: 413 SVNISTASPKRERSTTAASGLG 478
+ ++ +R G G
Sbjct: 68 RARVELSTGQRRGGGGRGGGFG 89
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMID 167
+E ++ F +FG+++ Q+ R +GFG+++F +Q A+ +M D
Sbjct: 219 SETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFD 272
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMID 167
+E ++ F +FG+++ Q+ R +GFG+++F +Q A+ +M D
Sbjct: 219 SETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFD 272
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMID 167
+E ++ F +FG+++ Q+ R +GFG+++F +Q A+ +M D
Sbjct: 219 SETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFD 272
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH 158
+E + F+ FG++ +V T G SKGFGF+ FA E A+ H
Sbjct: 166 KETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALH 213
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
++ ++ F S+G++ +V D G SKGFGF+ F + E A+
Sbjct: 270 DDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAV 314
Score = 29.5 bits (63), Expect = 2.3
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = +2
Query: 248 YGD-ITAEDLREYFGSFGQVTD---VFVPRPFRAFSFVTFLDPEVARSLCG--QDHIIKG 409
+GD E L + F FG +T + V + F FV F +PE A + D I+G
Sbjct: 160 FGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEG 219
Query: 410 --VSVNISTASPKRER 451
+ +++ A K ER
Sbjct: 220 TDLKLHVCRAQKKSER 235
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA 131
T + ++FS+ G + V++ D+RTG SKG +++F + E+
Sbjct: 36 TRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEES 78
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA 131
T + ++FS+ G + V++ D+RTG SKG +++F + E+
Sbjct: 181 TRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEES 223
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 116
TT+E + FS FG + ++ RD R+G S + FI+F
Sbjct: 252 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 116
TT+E + FS FG + ++ RD R+G S + FI+F
Sbjct: 252 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 116
TT+E + FS FG + ++ RD R+G S + FI+F
Sbjct: 183 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 220
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH 158
E+ +R F FG + + +D TG+ KG F+ + ++ +R H
Sbjct: 42 EKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLH 91
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH 158
E+ +R F FG + + +D TG+ KG F+ + ++ +R H
Sbjct: 42 EKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATLH 91
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
T ++ +R+ S +G++ + D T KG+GF+ F +A A+
Sbjct: 118 TNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAV 165
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
T ++ +R+ S +G++ + D T KG+GF+ F +A A+
Sbjct: 92 TNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAV 139
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 30.7 bits (66), Expect = 1.00
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 30 FSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
F+ FG +L +V D T LSK FGF+ + ++ A+
Sbjct: 355 FAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 393
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 30.7 bits (66), Expect = 1.00
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 30 FSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
F+ FG +L +V D T LSK FGF+ + ++ A+
Sbjct: 519 FAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Score = 27.9 bits (59), Expect = 7.0
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = +2
Query: 158 HDRRALVRCSHPERQGRLVDGSSKGIRRPLYGDITA----EDLREYFGSFGQVTDVFVPR 325
H+ + + HP Q + D ++ R+ G ++ E+LRE F FG + D V R
Sbjct: 117 HNIKVIEGMHHPV-QMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 326 ----PFRAFSFVTFLDPEVA 373
R +FVTF + A
Sbjct: 176 DQDGKSRGCAFVTFTNRSCA 195
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 30.7 bits (66), Expect = 1.00
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 30 FSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
F+ FG +L +V D T LSK FGF+ + ++ A+
Sbjct: 519 FAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Score = 27.9 bits (59), Expect = 7.0
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = +2
Query: 158 HDRRALVRCSHPERQGRLVDGSSKGIRRPLYGDITA----EDLREYFGSFGQVTDVFVPR 325
H+ + + HP Q + D ++ R+ G ++ E+LRE F FG + D V R
Sbjct: 117 HNIKVIEGMHHPV-QMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 326 ----PFRAFSFVTFLDPEVA 373
R +FVTF + A
Sbjct: 176 DQDGKSRGCAFVTFTNRSCA 195
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 30.7 bits (66), Expect = 1.00
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 30 FSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
F+ FG +L +V D T LSK FGF+ + ++ A+
Sbjct: 448 FAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 486
Score = 27.9 bits (59), Expect = 7.0
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = +2
Query: 158 HDRRALVRCSHPERQGRLVDGSSKGIRRPLYGDITA----EDLREYFGSFGQVTDVFVPR 325
H+ + + HP Q + D ++ R+ G ++ E+LRE F FG + D V R
Sbjct: 117 HNIKVIEGMHHPV-QMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 326 ----PFRAFSFVTFLDPEVA 373
R +FVTF + A
Sbjct: 176 DQDGKSRGCAFVTFTNRSCA 195
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 30.7 bits (66), Expect = 1.00
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 30 FSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 146
F+ FG +L +V D T LSK FGF+ + ++ A+
Sbjct: 519 FAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Score = 27.9 bits (59), Expect = 7.0
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = +2
Query: 158 HDRRALVRCSHPERQGRLVDGSSKGIRRPLYGDITA----EDLREYFGSFGQVTDVFVPR 325
H+ + + HP Q + D ++ R+ G ++ E+LRE F FG + D V R
Sbjct: 117 HNIKVIEGMHHPV-QMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 326 ----PFRAFSFVTFLDPEVA 373
R +FVTF + A
Sbjct: 176 DQDGKSRGCAFVTFTNRSCA 195
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 30.7 bits (66), Expect = 1.00
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHM 161
T E + FS FG +L+V + D G KG + F A RAL ++ +
Sbjct: 331 TAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKKFL 382
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 30.7 bits (66), Expect = 1.00
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHM 161
T E + FS FG +L+V + D G KG + F A RAL ++ +
Sbjct: 331 TAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKKFL 382
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 30.7 bits (66), Expect = 1.00
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHM 161
T E + FS FG +L+V + D G KG + F A RAL ++ +
Sbjct: 117 TAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKKFL 168
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 30.7 bits (66), Expect = 1.00
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHM 161
T E + FS FG +L+V + D G KG + F A RAL ++ +
Sbjct: 331 TAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKKFL 382
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 29.1 bits (62), Expect = 3.0
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA--QLRALGRRHMIDGRWCD 182
E+ + F ++G +L V++ + R SKGFGF+ E+ + RA + GR +
Sbjct: 64 EQDLAAMFFAYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAALHESHVQGRIIE 121
Query: 183 VRIPNGKDGSSTAHRKVFVGRCTEIL-QPKISESTSAP 293
VR ++ RK+ E+L PK+ AP
Sbjct: 122 VR------RATPTRRKLINNPQNEVLPPPKLCVDLRAP 153
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 116
TTE +R++F F + V++ + G SKG+GFI F
Sbjct: 77 TTETELREHFEKFFAVKDVKMVKSL-DGQSKGYGFITF 113
>AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical
protein Y113G7A.11 protein.
Length = 412
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 516 TPGTPSPRVKALPQIRVNCASCSP-QTYIVNSFQILYETNCVNNILYQ 656
TP TP P P + V C+P +++N+ + +++YQ
Sbjct: 5 TPKTPKPPQTPRPMLTVGSPPCTPCSPFVLNATSFCFRKGPARSVVYQ 52
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 29.1 bits (62), Expect = 3.0
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Frame = +3
Query: 9 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA--QLRALGRRHMIDGRWCD 182
E+ + F ++G +L V++ + R SKGFGF+ E+ + RA + GR +
Sbjct: 64 EQDLAAMFFAYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAALHESHVQGRIIE 121
Query: 183 VRIPNGKDGSSTAHRKVFVGRCTEIL-QPKISESTSAP 293
VR ++ RK+ E+L PK+ AP
Sbjct: 122 VR------RATPTRRKLINNPQNEVLPPPKLCVDLRAP 153
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 116
TTE +R++F F + V++ + G SKG+GFI F
Sbjct: 78 TTETELREHFEKFFAVKDVKMVKSL-DGQSKGYGFITF 114
>Z81043-8|CAB02804.2| 550|Caenorhabditis elegans Hypothetical
protein C29F3.2 protein.
Length = 550
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +3
Query: 105 FIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTEILQPK 269
F++F + L +H++ C + N D + T+ K+ +G C + QP+
Sbjct: 395 FVEFLLENGESFTLTEKHLVFATDCQQNVKNLDDLNPTSTGKINIGECFFMAQPE 449
>AL023813-2|CAA19424.2| 550|Caenorhabditis elegans Hypothetical
protein C29F3.2 protein.
Length = 550
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +3
Query: 105 FIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTEILQPK 269
F++F + L +H++ C + N D + T+ K+ +G C + QP+
Sbjct: 395 FVEFLLENGESFTLTEKHLVFATDCQQNVKNLDDLNPTSTGKINIGECFFMAQPE 449
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 6 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGR 152
TE+ + D+F +GD+ ++V + KG FI+F EA RA R
Sbjct: 251 TEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAERAAER 293
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 155 THDRRALVRCSHPERQGRLVDGSSKGIRRPLYG 253
T D + + C +P+ R+VD S +R+ +YG
Sbjct: 2233 TTDSKFIFACGYPDYSFRIVDTDSGRVRQAVYG 2265
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 155 THDRRALVRCSHPERQGRLVDGSSKGIRRPLYG 253
T D + + C +P+ R+VD S +R+ +YG
Sbjct: 2233 TTDSKFIFACGYPDYSFRIVDTDSGRVRQAVYG 2265
>U61237-1|AAB17542.1| 550|Caenorhabditis elegans M89 protein.
Length = 550
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +3
Query: 105 FIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTEILQPK 269
F++F + L +H++ C + N D + T K+ +G C + QP+
Sbjct: 395 FVEFLLENGESFTLTEKHLVFATDCQQNVKNLDDLNPTTTGKINIGECFFMAQPE 449
>AC024817-24|AAF59584.3| 237|Caenorhabditis elegans C-type lectin
protein 83 protein.
Length = 237
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +2
Query: 425 STASPKRERSTTAASGLGWGRMLGWPADHGHSRHPIPSSQSPTSNTSKLCLLF 583
S+A+P STT G +P D S +P SS SP S S +F
Sbjct: 185 SSATPYSTDSTTNTYGPTDSSASPYPTDSSTSSYPTDSSTSPYSTGSTTSYIF 237
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 27.9 bits (59), Expect = 7.0
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = +2
Query: 158 HDRRALVRCSHPERQGRLVDGSSKGIRRPLYGDITA----EDLREYFGSFGQVTDVFVPR 325
H+ + + HP Q + D ++ R+ G ++ E+LRE F FG + D V R
Sbjct: 117 HNIKVIEGMHHPV-QMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 326 ----PFRAFSFVTFLDPEVA 373
R +FVTF + A
Sbjct: 176 DQDGKSRGCAFVTFTNRSCA 195
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 27.9 bits (59), Expect = 7.0
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = +2
Query: 158 HDRRALVRCSHPERQGRLVDGSSKGIRRPLYGDITA----EDLREYFGSFGQVTDVFVPR 325
H+ + + HP Q + D ++ R+ G ++ E+LRE F FG + D V R
Sbjct: 117 HNIKVIEGMHHPV-QMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLR 175
Query: 326 ----PFRAFSFVTFLDPEVA 373
R +FVTF + A
Sbjct: 176 DQDGKSRGCAFVTFTNRSCA 195
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 184 TSHQRPSIMCRRPNARS*ASYSANLMKPKPLDSPVRVSRFT*TISKSPKEE 32
+SHQRPS+ P RS L +D +R+ ++ +S S E+
Sbjct: 424 SSHQRPSLQPTAPRTRS-CPRRRQLRSRNQIDFSIRIGGYSSDVSSSHAEQ 473
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +2
Query: 239 RPLYGDITAEDLREYFG-SFGQVTDVFV 319
R L+GDI+ E+++EY G G+++ FV
Sbjct: 55 RGLHGDISTEEIKEYIGEKVGKISFDFV 82
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +2
Query: 239 RPLYGDITAEDLREYFG-SFGQVTDVFV 319
R L+GDI+ E+++EY G G+++ FV
Sbjct: 55 RGLHGDISTEEIKEYIGEKVGKISFDFV 82
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 3 TTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA 119
T EE +++ S FG + + + + +G SKG F+ F+
Sbjct: 274 TKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFS 312
>U10402-11|AAA19063.2| 434|Caenorhabditis elegans Gro-1 operon gene
protein 3 protein.
Length = 434
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 21 RDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQ-LRALGRR--HMID 167
++Y FGD V+ D + GFI A ++A+ L+ LG R H++D
Sbjct: 260 QEYAGVFGDASFVKNTLDLQAAAPLPLGFILAASFQAKHLKGLGDREVHILD 311
>AY052771-1|AAL14110.1| 434|Caenorhabditis elegans GOP-3 protein.
Length = 434
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 21 RDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQ-LRALGRR--HMID 167
++Y FGD V+ D + GFI A ++A+ L+ LG R H++D
Sbjct: 260 QEYAGVFGDASFVKNTLDLQAAAPLPLGFILAASFQAKHLKGLGDREVHILD 311
>AC006775-2|AAF60621.2| 557|Caenorhabditis elegans Hypothetical
protein Y46H3B.1 protein.
Length = 557
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 527 PIPSSQSPTSNTSKLCLLFSTN 592
P+PS+ PTSN S C +TN
Sbjct: 400 PLPSTPEPTSNPSDPCFYDTTN 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,326,913
Number of Sequences: 27780
Number of extensions: 372413
Number of successful extensions: 1203
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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