Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30468
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.    23   2.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.6  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   7.4  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   9.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.7  

>AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.
          Length = 46

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 104 THFFEIFSVELSAMAIGLNSLNLNI 30
           TH+ ++F+ E  AM IGL    + +
Sbjct: 19  THYPDVFTREELAMKIGLTEARIQV 43


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 140 KSFKLDMTLLLNTHFFEIFSVELSAMAIGLN 48
           K+FK    L+   HF  +F + ++    GLN
Sbjct: 18  KNFKYLKVLVTFAHFICLFPITINIRKNGLN 48


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 518 WSEPTSH*QSDVFQNISVVQVL 453
           WSE T+H  +  + NI +  V+
Sbjct: 18  WSEDTTHKYTTKYDNIDLENVV 39


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 166 VIGRCTNLSTAVSKGELKRRLKAEEKLREKPK 261
           +I + T    +      +RRLK E K+  +PK
Sbjct: 122 IITKMTLTQVSTWFANARRRLKKENKMTWEPK 153


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 125 DMTLLLNTHFFEIFS 81
           ++ + L+TH+F +FS
Sbjct: 266 ELIVTLSTHYFPVFS 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,262
Number of Sequences: 336
Number of extensions: 2608
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)