Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30467
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    27   0.18 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   6.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.7  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -2

Query: 211 PSAANVTSTRSPRDSRP*KPADIFAWKLFQHSENCSSDAMIATTRRGT 68
           P+ A+ T T S   S    PA I ++ L QH   CSS   + +T   T
Sbjct: 203 PTIASATYTNSANSSIW-SPASIDSFTLEQHRSWCSSSQPVLSTTNST 249


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/57 (21%), Positives = 24/57 (42%)
 Frame = -2

Query: 622 ELFDAIDGLFGLLTATGVEEGLESRSVSNLVITDCLCCTTWGLASKSALVWMAWNFL 452
           ++ D+++ +FG +   G          + +V   C C  +  +   S L W  W+ L
Sbjct: 525 DVCDSVNRIFGFIIIIGC-----LIQFNTIVFAFCYCYYSISIRPISTLGWFFWSLL 576


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 701 VFCRTRGTCFQWIYAFS 651
           VFCR R   + + YAFS
Sbjct: 112 VFCRDRVNPYLFYYAFS 128


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -2

Query: 628 EEELFDAIDGLFG 590
           +E+L+DAI+ L+G
Sbjct: 337 KEKLYDAIEALYG 349


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 692 CKRRICDDTRRR*EQCCRSQNGTRFVNESMWD 787
           C    CD+   R  +CC++  G  + ++ + D
Sbjct: 89  CPEPTCDEPVHRPGRCCKTCPGDLYDSDIIQD 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,205
Number of Sequences: 336
Number of extensions: 3651
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)