Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30466
(539 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellul... 136 3e-31
UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140; Eukar... 110 2e-23
UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiell... 94 2e-18
UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8; Euryar... 94 2e-18
UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5; Euryar... 93 5e-18
UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9; Eukar... 93 5e-18
UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8; Archae... 88 1e-16
UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lambl... 87 2e-16
UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9; Archae... 85 1e-15
UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1; Nanoar... 83 3e-15
UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S riboso... 82 9e-15
UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1; T... 78 1e-13
UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep... 78 1e-13
UniRef50_UPI00006CD29C Cluster: hypothetical protein TTHERM_0026... 77 3e-13
UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1; Encephalito... 77 3e-13
UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9; Euryar... 76 6e-13
UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7; Archae... 75 1e-12
UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2; Ostreoco... 68 1e-10
UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, wh... 54 2e-06
UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1; Chaetosphae... 52 6e-06
UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus ... 50 3e-05
UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellul... 49 6e-05
UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit co... 48 1e-04
UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32; Bacter... 48 1e-04
UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellul... 47 2e-04
UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protei... 46 6e-04
UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondria... 46 6e-04
UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n... 45 0.001
UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16; stramenopi... 45 0.001
UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=... 45 0.001
UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus... 45 0.001
UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=... 45 0.001
UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces cap... 44 0.002
UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19... 44 0.003
UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.007
UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1; Helicospori... 42 0.012
UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of str... 42 0.012
UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|R... 41 0.016
UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellul... 41 0.021
UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellu... 40 0.037
UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellul... 40 0.037
UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19; ... 40 0.037
UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10; Rickettsia... 39 0.064
UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellul... 39 0.064
UniRef50_Q6E790 Cluster: Ribosomal protein S19; n=6; Oomycetes|R... 39 0.085
UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19, pu... 38 0.11
UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47; Bacter... 38 0.11
UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1; Oltmannsiel... 38 0.20
UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1; Pseudendocl... 37 0.26
UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;... 36 0.45
UniRef50_Q0CW10 Cluster: Putative uncharacterized protein; n=1; ... 36 0.60
UniRef50_P0C478 Cluster: Chloroplast 30S ribosomal protein S19; ... 36 0.60
UniRef50_Q23889 Cluster: Ribosomal protein S19; n=2; Dictyosteli... 35 1.0
UniRef50_Q8Y4F7 Cluster: Lmo2487 protein; n=13; Listeria|Rep: Lm... 34 1.8
UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria r... 34 1.8
UniRef50_A7QLC7 Cluster: Chromosome chr11 scaffold_118, whole ge... 34 1.8
UniRef50_A6BM61 Cluster: Ribosomal protein S19; n=1; Gnetum parv... 34 1.8
UniRef50_A3I9K3 Cluster: AAA ATPase; n=1; Bacillus sp. B14905|Re... 33 4.2
UniRef50_A7QBJ9 Cluster: Chromosome chr13 scaffold_74, whole gen... 32 7.3
>UniRef50_P62841 Cluster: 40S ribosomal protein S15; n=46; cellular
organisms|Rep: 40S ribosomal protein S15 - Homo sapiens
(Human)
Length = 145
Score = 136 bits (329), Expect = 3e-31
Identities = 60/66 (90%), Positives = 65/66 (98%)
Frame = +2
Query: 248 LENMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 427
L +MII+PEMVGS+VG+YNGKTFNQVEIKPEMIGHYLGEFS+TYKPVKHGRPGIGATHSS
Sbjct: 80 LRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHSS 139
Query: 428 RFIPLK 445
RFIPLK
Sbjct: 140 RFIPLK 145
Score = 109 bits (262), Expect = 4e-23
Identities = 55/83 (66%), Positives = 64/83 (77%)
Frame = +3
Query: 6 MAEVDETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVK 185
MAEV++ KKKR FRKFTYRGVDLDQLLDM EQLM+L GL+RK +L+K
Sbjct: 1 MAEVEQ--KKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLK 58
Query: 186 KLRRAKKEAPPNEKPEIVKTHLR 254
+LR+AKKEAPP EKPE+VKTHLR
Sbjct: 59 RLRKAKKEAPPMEKPEVVKTHLR 81
>UniRef50_Q01855 Cluster: 40S ribosomal protein S15; n=140;
Eukaryota|Rep: 40S ribosomal protein S15 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 142
Score = 110 bits (265), Expect = 2e-23
Identities = 51/66 (77%), Positives = 59/66 (89%)
Frame = +2
Query: 248 LENMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 427
+ NMIIVPEM+GS+VGIYNGK FNQVEI+PEM+GHYLGEFS+TY PV+HGR GAT +S
Sbjct: 80 MRNMIIVPEMIGSVVGIYNGKAFNQVEIRPEMLGHYLGEFSITYTPVRHGR--AGAT-TS 136
Query: 428 RFIPLK 445
RFIPLK
Sbjct: 137 RFIPLK 142
Score = 72.5 bits (170), Expect = 6e-12
Identities = 34/74 (45%), Positives = 46/74 (62%)
Frame = +3
Query: 33 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEA 212
KKR+F+ +YRGVDL++LL+M E ++L G+ KP +KKLR AK A
Sbjct: 8 KKRVFKTHSYRGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRAAKLAA 67
Query: 213 PPNEKPEIVKTHLR 254
P NEKP V+TH+R
Sbjct: 68 PENEKPAPVRTHMR 81
>UniRef50_Q3LWF2 Cluster: Ribosomal protein L15; n=1; Bigelowiella
natans|Rep: Ribosomal protein L15 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 93.9 bits (223), Expect = 2e-18
Identities = 38/66 (57%), Positives = 52/66 (78%)
Frame = +2
Query: 248 LENMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 427
+ N II P M+ + +YNG +++ +E++ M+G +LGEFS+TYKPVKHG PGIGATHSS
Sbjct: 86 VRNCIITPSMINKKIYVYNGNSYSYIELQTLMLGKFLGEFSLTYKPVKHGNPGIGATHSS 145
Query: 428 RFIPLK 445
RFIPL+
Sbjct: 146 RFIPLR 151
>UniRef50_Q9HIR3 Cluster: 30S ribosomal protein S19P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Thermoplasma acidophilum
Length = 151
Score = 93.9 bits (223), Expect = 2e-18
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = +2
Query: 218 E*EARDREDSLENMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHG 397
E + D + + ++II+P VG IV +YNG ++ + EIKPEMIGHYLGEF +T K VKH
Sbjct: 76 ESDEEDVKTHVRDVIILPNYVGKIVEVYNGNSYFKFEIKPEMIGHYLGEFVMTRKEVKHS 135
Query: 398 RPGIGATHSSRFIPLK 445
PG+GAT SS+F+PLK
Sbjct: 136 GPGVGATRSSKFMPLK 151
>UniRef50_P15010 Cluster: 30S ribosomal protein S19P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Halobacterium salinarium (Halobacterium halobium)
Length = 140
Score = 92.7 bits (220), Expect = 5e-18
Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Frame = +2
Query: 161 T*TNGIGQE----AASRQERGSSE*EARDREDSLENMIIVPEMVGSIVGIYNGKTFNQVE 328
T T G+ +E A +E G+ E L +M ++PE VG +Y G+ F +VE
Sbjct: 42 TITRGLSEEHHKVLAEARESGTEETANNPIRTHLRDMPVLPEFVGLTFAVYTGQEFERVE 101
Query: 329 IKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 445
++PEMIGHYLGEF +T V+HG+ GIGAT SS+F+PLK
Sbjct: 102 VQPEMIGHYLGEFQLTRSSVEHGQAGIGATRSSKFVPLK 140
Score = 37.9 bits (84), Expect = 0.15
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +3
Query: 51 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKP 230
+FTYRG DLD+L +M E + EL+ GL + ++ + R + E N
Sbjct: 12 EFTYRGHDLDELQEMSLEDVAELLPARQRRTITRGLSEEHHKVLAEARESGTEETANNP- 70
Query: 231 EIVKTHLR 254
++THLR
Sbjct: 71 --IRTHLR 76
>UniRef50_Q9FML6 Cluster: 40S ribosomal protein S15-6; n=9;
Eukaryota|Rep: 40S ribosomal protein S15-6 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 160
Score = 92.7 bits (220), Expect = 5e-18
Identities = 44/70 (62%), Positives = 53/70 (75%), Gaps = 4/70 (5%)
Frame = +2
Query: 248 LENMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGA---- 415
L NMIIVPEM+GS+VG++NGK FN++ IKPEMIGHYL EFS+T K V H RP I
Sbjct: 91 LRNMIIVPEMIGSVVGVHNGKKFNEIVIKPEMIGHYLAEFSMTCKKVNHHRPRICGCCCF 150
Query: 416 THSSRFIPLK 445
S+RFIPL+
Sbjct: 151 RRSTRFIPLR 160
Score = 78.6 bits (185), Expect = 9e-14
Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Frame = +3
Query: 33 KKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEA 212
KKR F+KF++RG ++D LL M N L +L + GLK++P+ L+KKLRRAKKEA
Sbjct: 17 KKRTFKKFSFRGFNVDALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIKKLRRAKKEA 76
Query: 213 PPNE--KPEIVKTHLR 254
KPE+VKTHLR
Sbjct: 77 SDENKMKPEVVKTHLR 92
>UniRef50_Q975I5 Cluster: 30S ribosomal protein S19P; n=8;
Archaea|Rep: 30S ribosomal protein S19P - Sulfolobus
tokodaii
Length = 140
Score = 87.8 bits (208), Expect = 1e-16
Identities = 38/66 (57%), Positives = 50/66 (75%)
Frame = +2
Query: 248 LENMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 427
+ +MII+PEMVG +YNGK F + ++ PEMIGHYLGEFS+T K V+HG PG+ AT SS
Sbjct: 74 VRDMIILPEMVGLKFAVYNGKEFVEFQVVPEMIGHYLGEFSITTKKVEHGEPGLKATRSS 133
Query: 428 RFIPLK 445
F+ +K
Sbjct: 134 LFLAMK 139
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/70 (31%), Positives = 40/70 (57%)
Frame = +3
Query: 45 FRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNE 224
++KF YRG LD+LL+MP ++ ++L+ G K L++K+R+ +E +
Sbjct: 9 WKKFRYRGKSLDELLNMPMDEFIKLLPSRQRRSLKKGFSDKQRRLLEKIRKYVRE---GK 65
Query: 225 KPEIVKTHLR 254
+ +KTH+R
Sbjct: 66 YSKTIKTHVR 75
>UniRef50_Q7QTT8 Cluster: GLP_191_11250_10813; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_191_11250_10813 - Giardia lamblia
ATCC 50803
Length = 145
Score = 87.0 bits (206), Expect = 2e-16
Identities = 38/66 (57%), Positives = 50/66 (75%)
Frame = +2
Query: 248 LENMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 427
L +MII PEM+G V +YNG+ F VEIKP M+G L E+S++YK V HG+ GIGAT SS
Sbjct: 80 LRDMIIFPEMIGMTVSVYNGRQFIPVEIKPPMVGRALREYSMSYKIVSHGKVGIGATRSS 139
Query: 428 RFIPLK 445
+F+PL+
Sbjct: 140 KFVPLR 145
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +3
Query: 18 DETLKKKRIFRKFTYRGVDLDQLLDMP-NEQLMELMHXXXXXXXXXGLKRKPMALVKKLR 194
D+ ++R + +RGV++++L M + L +L GL K + V KLR
Sbjct: 3 DQVKTRRRGLAQPNFRGVEVEKLATMKITDILPKLNARCRRRIGKHGLSMKHLRFVNKLR 62
Query: 195 RAKKEAPPNEKPEIVKTHLRT*SSFP 272
++ A P++KP+IV+THLR FP
Sbjct: 63 -LRRAAQPSQKPKIVRTHLRDMIIFP 87
>UniRef50_Q8PV46 Cluster: 30S ribosomal protein S19P; n=9;
Archaea|Rep: 30S ribosomal protein S19P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 136
Score = 84.6 bits (200), Expect = 1e-15
Identities = 36/64 (56%), Positives = 48/64 (75%)
Frame = +2
Query: 254 NMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRF 433
+MII+PEM+G + ++NGK F VE++PEMIGH GEF+ T V HG G+GAT SS+F
Sbjct: 73 DMIILPEMIGIAIEVHNGKEFVNVELQPEMIGHRFGEFAPTRSRVNHGSAGVGATRSSKF 132
Query: 434 IPLK 445
+PLK
Sbjct: 133 VPLK 136
>UniRef50_Q74MZ5 Cluster: 30S ribosomal protein S19P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S19P -
Nanoarchaeum equitans
Length = 140
Score = 83.4 bits (197), Expect = 3e-15
Identities = 40/64 (62%), Positives = 45/64 (70%)
Frame = +2
Query: 254 NMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRF 433
N II+P MVG V +YNGK + V+IKPEMIGHYLGEFS T K KH PGIGAT SS
Sbjct: 77 NTIILPFMVGVTVHVYNGKEYVPVQIKPEMIGHYLGEFSFTTKRPKHSAPGIGATRSSAH 136
Query: 434 IPLK 445
+ K
Sbjct: 137 VSKK 140
>UniRef50_UPI0000DD8522 Cluster: PREDICTED: similar to 40S ribosomal
protein S15 (RIG protein); n=2; Homo sapiens|Rep:
PREDICTED: similar to 40S ribosomal protein S15 (RIG
protein) - Homo sapiens
Length = 134
Score = 81.8 bits (193), Expect = 9e-15
Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 6/88 (6%)
Frame = +3
Query: 9 AEVDETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXX------GLKRKP 170
AEV + +KK+ FR FT RGVDLDQLLDM +EQ M+L GL RK
Sbjct: 15 AEVQQ--QKKQTFRNFTQRGVDLDQLLDMSSEQRMQLNSARRRRLNPGLWRLNPGLWRKQ 72
Query: 171 MALVKKLRRAKKEAPPNEKPEIVKTHLR 254
+L+K+LR+AKK APP EKPE+VKTH R
Sbjct: 73 RSLLKRLRKAKKGAPPTEKPEVVKTHPR 100
Score = 39.9 bits (89), Expect = 0.037
Identities = 15/26 (57%), Positives = 23/26 (88%)
Frame = +2
Query: 254 NMIIVPEMVGSIVGIYNGKTFNQVEI 331
+++++P MVGS VG+Y+GKTF QVE+
Sbjct: 101 DVLLLPAMVGSTVGVYDGKTFKQVEM 126
>UniRef50_A2DVD8 Cluster: Ribosomal protein S19, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19,
putative - Trichomonas vaginalis G3
Length = 144
Score = 78.2 bits (184), Expect = 1e-13
Identities = 34/66 (51%), Positives = 48/66 (72%)
Frame = +2
Query: 248 LENMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 427
L +M+I+PE V +++GIY+G F +V+IKPEMIGH L +F+ + K VKH + G+GAT SS
Sbjct: 79 LRHMVILPEFVDNVIGIYDGHVFFEVQIKPEMIGHVLADFAPSKKVVKHSKAGVGATRSS 138
Query: 428 RFIPLK 445
LK
Sbjct: 139 SATSLK 144
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 48 RKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKK--EAPPN 221
R +TYRG LD L M + +EL+ K + L++KL++A++ E
Sbjct: 10 RNYTYRGKTLDDLRAMELKDFVELLPTKRRRFISRSFDLKHVHLIEKLKKARQAVEGQAG 69
Query: 222 EKPEIVKTHLR 254
+P +VKTHLR
Sbjct: 70 VRPPVVKTHLR 80
>UniRef50_Q2QAS7 Cluster: Ribosomal protein S19; n=3; Archaea|Rep:
Ribosomal protein S19 - uncultured marine group II
euryarchaeote HF70_59C08
Length = 173
Score = 78.2 bits (184), Expect = 1e-13
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = +2
Query: 254 NMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRF 433
++ I+PEMVG +G+++G+ F VEI PEMIGH LGE++ T + V H PG+GAT SS+
Sbjct: 110 SLYILPEMVGRTIGVHDGRAFKMVEILPEMIGHALGEYASTRRSVTHTGPGVGATRSSKH 169
Query: 434 IPLK 445
+ LK
Sbjct: 170 VALK 173
>UniRef50_UPI00006CD29C Cluster: hypothetical protein
TTHERM_00266390; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00266390 - Tetrahymena
thermophila SB210
Length = 144
Score = 76.6 bits (180), Expect = 3e-13
Identities = 31/51 (60%), Positives = 41/51 (80%)
Frame = +2
Query: 254 NMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPG 406
+MI++PE+VG IVG+YNGK F VE+K +MIG YL EF++TYKP HG+ G
Sbjct: 87 SMIVIPELVGGIVGVYNGKEFVNVEVKFDMIGKYLAEFAMTYKPTTHGKTG 137
Score = 44.0 bits (99), Expect = 0.002
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Frame = +3
Query: 36 KRIFRKFTYRGVDLDQLLDMPN---------EQLMELMHXXXXXXXXXGLKRKPMALVKK 188
K+ +KFT+RG L++L + + ++L L G+ K V K
Sbjct: 5 KKSIKKFTFRGKGLEELTALASGSNSEKLISDELAALFDAKTRRRVKRGISEKYAKFVNK 64
Query: 189 LRRAKKEAPPNEKPEIVKTHLRT 257
+RR+K++ P EKP VKTH R+
Sbjct: 65 VRRSKEKCPAGEKPVPVKTHYRS 87
>UniRef50_Q8SRE7 Cluster: RIBOSOMAL PROTEIN S15; n=1;
Encephalitozoon cuniculi|Rep: RIBOSOMAL PROTEIN S15 -
Encephalitozoon cuniculi
Length = 149
Score = 76.6 bits (180), Expect = 3e-13
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = +2
Query: 260 IIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIP 439
II P M+G++VG++ G + VEIKPEM+G L +F+ T KHGRPGIGA+ SS+F+P
Sbjct: 88 IIWPAMIGALVGVHVGNGYLPVEIKPEMVGFVLSDFAPTRVTPKHGRPGIGASSSSKFVP 147
Query: 440 LK 445
LK
Sbjct: 148 LK 149
Score = 55.2 bits (127), Expect = 9e-07
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +3
Query: 18 DETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRR 197
+E KKKR FR++TYRGV +++L MP ++ +L GL + + L+K
Sbjct: 6 NEVSKKKRTFRRYTYRGVPVEELEKMPFSEVAKLFPSRLRRRVRRGLSSREVELIKGCIA 65
Query: 198 AKKE-APPNEKPEIVKTHLRT 257
AK + KPE+V+TH R+
Sbjct: 66 AKAACVSSSSKPEMVRTHARS 86
>UniRef50_Q6LX07 Cluster: 30S ribosomal protein S19P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S19P -
Methanococcus maripaludis
Length = 161
Score = 75.8 bits (178), Expect = 6e-13
Identities = 32/74 (43%), Positives = 47/74 (63%)
Frame = +2
Query: 224 EARDREDSLENMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRP 403
+AR + +I PEM+G GIYNGK F ++++ E +G +LGE + T V+HG P
Sbjct: 88 DARVIRTHCRDFVITPEMIGLTFGIYNGKEFKEIKLVEETVGRFLGEMAPTRGVVQHGSP 147
Query: 404 GIGATHSSRFIPLK 445
G+GAT S F+P+K
Sbjct: 148 GMGATRGSMFVPIK 161
Score = 42.3 bits (95), Expect = 0.007
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = +3
Query: 51 KFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKP 230
+F Y+G L++L +MP ++ ME++ G+ K LV K+++A++ +
Sbjct: 30 EFKYKGFSLEELQEMPIKKFMEIVPSRQRRTMARGITPKQRKLVMKIKKARRLTNRGKDA 89
Query: 231 EIVKTHLR 254
+++TH R
Sbjct: 90 RVIRTHCR 97
>UniRef50_Q8ZWL4 Cluster: 30S ribosomal protein S19P; n=7;
Archaea|Rep: 30S ribosomal protein S19P - Pyrobaculum
aerophilum
Length = 158
Score = 74.9 bits (176), Expect = 1e-12
Identities = 36/64 (56%), Positives = 45/64 (70%)
Frame = +2
Query: 254 NMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRF 433
+MII+PEMVG + +YNG T+ V I P IGHYLGEF++T K V+HG PG+ AT SS
Sbjct: 95 DMIILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTKIVQHGEPGLKATRSSLH 154
Query: 434 IPLK 445
I K
Sbjct: 155 IAAK 158
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/67 (32%), Positives = 40/67 (59%)
Frame = +3
Query: 54 FTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPE 233
F YRG L++LL+M ++ ++L+ GLK + L++K+R+AK+ A +K
Sbjct: 29 FRYRGKTLEELLNMSMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKK-V 87
Query: 234 IVKTHLR 254
+++TH R
Sbjct: 88 VIRTHCR 94
>UniRef50_Q00XN5 Cluster: Homology to unknown gene; n=2;
Ostreococcus|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 561
Score = 68.1 bits (159), Expect = 1e-10
Identities = 40/64 (62%), Positives = 40/64 (62%)
Frame = -3
Query: 447 YLSGMNLELCVAPIPGLPCFTGLYVTENSPR*WPIISGLISTWLKVFPL*MPTIEPTISG 268
YLSGMNLE P PC TG YV SPR PIISGLIST L PL PT EPTISG
Sbjct: 11 YLSGMNLE---PERPARPCETGRYVIAYSPRYDPIISGLISTVLNTLPLYTPTTEPTISG 67
Query: 267 TMIM 256
M M
Sbjct: 68 MMGM 71
>UniRef50_A7QFV7 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_89, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 319
Score = 54.4 bits (125), Expect = 2e-06
Identities = 28/42 (66%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +2
Query: 248 LENMIIVPEMVGSIVGIYNGKTFNQVEI-KPEMIGHYLGEFS 370
L NMIIV EM+G IVG+YNGKT NQV I KP+ I HYL S
Sbjct: 31 LYNMIIVLEMIGYIVGVYNGKTLNQVGILKPKKICHYLTSLS 72
>UniRef50_Q8M1F9 Cluster: Ribosomal protein S19; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S19 -
Chaetosphaeridium globosum
Length = 114
Score = 52.4 bits (120), Expect = 6e-06
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Frame = +2
Query: 176 IGQEAASRQERGSSE*EARDREDSLENM-----IIVPEMVGSIVGIYNGKTFNQVEIKPE 340
+G++ ++E GS+E + SL+ + I+P+ VG+IV +YNGK F ++I E
Sbjct: 25 MGEDTRLKRE-GSTEQAFVTKSSSLQKIWSRRSCILPQFVGNIVSVYNGKNFVNLKITDE 83
Query: 341 MIGHYLGEFSVTYKPVK 391
M+GH GEF+ T K K
Sbjct: 84 MVGHKYGEFASTRKIAK 100
>UniRef50_Q9AIN5 Cluster: Ribosomal protein S19; n=1; Candidatus
Carsonella ruddii|Rep: Ribosomal protein S19 -
Carsonella ruddii
Length = 88
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +2
Query: 254 NMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 400
N I+P+M+G + ++NGK FN+V I EMIG+ LGEFS T H +
Sbjct: 30 NSTIIPKMIGLNIFVHNGKKFNKVYIIEEMIGYKLGEFSFTKNFKSHSK 78
>UniRef50_P94271 Cluster: 30S ribosomal protein S19; n=66; cellular
organisms|Rep: 30S ribosomal protein S19 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 92
Score = 49.2 bits (112), Expect = 6e-05
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 376
I+PEMV + +YNGKTF + I +++GH LGEFS T
Sbjct: 40 IIPEMVSLTISVYNGKTFIPIYITEDLVGHKLGEFSPT 77
>UniRef50_A6S058 Cluster: Mitochondrial ribosome small subunit
component S19; n=2; Sclerotiniaceae|Rep: Mitochondrial
ribosome small subunit component S19 - Botryotinia
fuckeliana B05.10
Length = 93
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 382
I+P VG I+NGK +N+V I +M+GH LGEFS T K
Sbjct: 44 ILPNFVGLTFEIHNGKVYNEVTITEDMVGHKLGEFSATRK 83
>UniRef50_O66435 Cluster: 30S ribosomal protein S19; n=32;
Bacteria|Rep: 30S ribosomal protein S19 - Aquifex
aeolicus
Length = 219
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 376
I+PE VG + ++NGKTF V I +M+GH LGEF+ T
Sbjct: 165 IIPEFVGHTIAVHNGKTFVPVYITQDMVGHKLGEFAPT 202
>UniRef50_Q4URE3 Cluster: 30S ribosomal protein S19; n=18; cellular
organisms|Rep: 30S ribosomal protein S19 - Xanthomonas
campestris pv. campestris (strain 8004)
Length = 89
Score = 47.2 bits (107), Expect = 2e-04
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +2
Query: 260 IIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHG 397
+I+PEMVG + ++NGK V + M+GH LGEF+VT HG
Sbjct: 37 MILPEMVGITIAVHNGKNHIPVLVNENMVGHKLGEFAVTRTFKGHG 82
>UniRef50_Q9US30 Cluster: Probable mitochondrial ribosomal protein
S19; n=1; Schizosaccharomyces pombe|Rep: Probable
mitochondrial ribosomal protein S19 -
Schizosaccharomyces pombe (Fission yeast)
Length = 108
Score = 46.0 bits (104), Expect = 6e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +2
Query: 245 SLENMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 382
++ + I+P MVG+ ++NGK++ V+I +MIGH LGEF+ T K
Sbjct: 53 AVRSATILPRMVGAQFMVHNGKSYANVKITEDMIGHKLGEFAPTRK 98
>UniRef50_P39697 Cluster: 40S ribosomal protein S19, mitochondrial
precursor; n=85; Streptophytina|Rep: 40S ribosomal
protein S19, mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 212
Score = 46.0 bits (104), Expect = 6e-04
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 400
I+PE V S V IYNGKT + +I +GH GEF+ T K KH +
Sbjct: 165 ILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAK 210
>UniRef50_UPI00015BD7EF Cluster: UPI00015BD7EF related cluster; n=1;
unknown|Rep: UPI00015BD7EF UniRef100 entry - unknown
Length = 153
Score = 45.2 bits (102), Expect = 0.001
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 376
++ + V + ++NGKTF + I PEM+GH LGEF+ T
Sbjct: 99 VISDFVNHTIAVHNGKTFVPIYITPEMVGHKLGEFAPT 136
>UniRef50_Q8LWZ8 Cluster: Ribosomal protein S19; n=16;
stramenopiles|Rep: Ribosomal protein S19 - Laminaria
digitata
Length = 89
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 382
I P VG + IYNGK +IKPEM+GH LGEF T K
Sbjct: 35 IYPAAVGLKLQIYNGKDMISRKIKPEMVGHKLGEFVTTRK 74
>UniRef50_P26874 Cluster: Mitochondrial ribosomal protein S19; n=7;
Eukaryota|Rep: Mitochondrial ribosomal protein S19 -
Marchantia polymorpha (Liverwort)
Length = 93
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 400
I+P+ VG IYNGK F ++I EM+GH GEF+ T K G+
Sbjct: 32 ILPQFVGCYAQIYNGKGFVGLKITEEMVGHKFGEFASTRKTSSLGK 77
>UniRef50_A6YEB0 Cluster: Ribosomal protein S19; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S19 - Chlorokybus
atmophyticus (Soil alga)
Length = 130
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 394
I+P+ VG ++NGK F V I EMIGH GEF+ T K H
Sbjct: 80 ILPDFVGQSFEVHNGKLFIPVRITEEMIGHKFGEFASTRKKPVH 123
>UniRef50_P50893 Cluster: Mitochondrial ribosomal protein S19; n=3;
Chlorophyta|Rep: Mitochondrial ribosomal protein S19 -
Platymonas subcordiformis
Length = 83
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 260 IIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 394
++ P+ +G V IYNG + ++IK +MIGH GEF+ T K H
Sbjct: 34 VVSPKFIGREVEIYNGHKWITIKIKEDMIGHKFGEFAFTRKATIH 78
>UniRef50_A6QU02 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 144
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 370
I+P VG ++NGKT+N+V I EM+G LGEFS
Sbjct: 19 ILPNFVGLKFAVHNGKTYNEVFITDEMVGRKLGEFS 54
>UniRef50_P53733 Cluster: Mitochondrial 37S ribosomal protein S19;
n=16; Dikarya|Rep: Mitochondrial 37S ribosomal protein
S19 - Saccharomyces cerevisiae (Baker's yeast)
Length = 91
Score = 43.6 bits (98), Expect = 0.003
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 382
I+P+ VG I+NGK + +EI +M+GH LGEF+ T K
Sbjct: 42 ILPQFVGLKFQIHNGKEYVPIEISEDMVGHKLGEFAPTRK 81
>UniRef50_Q2GUS0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 152
Score = 42.3 bits (95), Expect = 0.007
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFS 370
I+P VG ++NGK ++ V I EM+GH LGEFS
Sbjct: 87 ILPNFVGLKFQVHNGKVYHDVTITEEMVGHKLGEFS 122
>UniRef50_Q2EEV9 Cluster: Ribosomal protein S19; n=1;
Helicosporidium sp. ex Simulium jonesii|Rep: Ribosomal
protein S19 - Helicosporidium sp. subsp. Simulium
jonesii (Green alga)
Length = 117
Score = 41.5 bits (93), Expect = 0.012
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 376
IVP M+G I+ ++NG+ V I EM+G LGEF+ T
Sbjct: 57 IVPLMIGEIIAVHNGREHIPVYITEEMVGFKLGEFATT 94
>UniRef50_Q6CDN4 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 89
Score = 41.5 bits (93), Expect = 0.012
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKH 394
I+P+ VG ++NGK + V + +M+G LGE++ T KP ++
Sbjct: 41 IIPQFVGVTFHVHNGKEYVPVNVTQDMVGTKLGEYAYTRKPFRY 84
>UniRef50_Q9G868 Cluster: Ribosomal protein S19; n=2; Eukaryota|Rep:
Ribosomal protein S19 - Malawimonas jakobiformis
Length = 85
Score = 41.1 bits (92), Expect = 0.016
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 260 IIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 376
+I P+ + V IYNG F ++I MIGH GEFS+T
Sbjct: 32 VIYPQYLNKKVKIYNGNKFIPIKITDNMIGHKFGEFSLT 70
>UniRef50_Q8D208 Cluster: 30S ribosomal protein S19; n=14; cellular
organisms|Rep: 30S ribosomal protein S19 -
Wigglesworthia glossinidia brevipalpis
Length = 92
Score = 40.7 bits (91), Expect = 0.021
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 376
I P+M+G + ++NGK + I EM+GH LGEF T
Sbjct: 40 IFPDMIGMTISVHNGKQHIPIFIGDEMVGHKLGEFVPT 77
>UniRef50_P0A7U6 Cluster: 30S ribosomal protein S19; n=263; cellular
organisms|Rep: 30S ribosomal protein S19 - Shigella
flexneri
Length = 92
Score = 39.9 bits (89), Expect = 0.037
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 376
I P M+G + ++NG+ V + EM+GH LGEF+ T
Sbjct: 40 IFPNMIGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPT 77
>UniRef50_Q6A6N0 Cluster: 30S ribosomal protein S19; n=75; cellular
organisms|Rep: 30S ribosomal protein S19 -
Propionibacterium acnes
Length = 93
Score = 39.9 bits (89), Expect = 0.037
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +2
Query: 260 IIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 376
++ P+M+G +G+++G+ V + M+GH LGEF+ T
Sbjct: 39 MVTPDMIGHTIGVHDGRKHVPVFVTESMVGHKLGEFAPT 77
>UniRef50_P56808 Cluster: Chloroplast 30S ribosomal protein S19;
n=326; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S19 - Arabidopsis thaliana (Mouse-ear cress)
Length = 92
Score = 39.9 bits (89), Expect = 0.037
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 376
I+P M+G + I+NG+ V I M+GH LGEFS T
Sbjct: 40 IIPTMIGHTIAIHNGREHLPVYIIDLMVGHKLGEFSPT 77
>UniRef50_Q5GSU8 Cluster: Ribosomal protein S19; n=10;
Rickettsiales|Rep: Ribosomal protein S19 - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 94
Score = 39.1 bits (87), Expect = 0.064
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 260 IIVPEMVGSIVGIYNGKTFNQVEIKPE-MIGHYLGEFSVTYKPVKH 394
+I+P +G +YNGK + V + + MIGH GEFS T K H
Sbjct: 40 VILPNCLGLKFAVYNGKDYIPVSVNDQNMIGHKFGEFSPTRKFAGH 85
>UniRef50_Q6YR17 Cluster: 30S ribosomal protein S19; n=72; cellular
organisms|Rep: 30S ribosomal protein S19 - Onion yellows
phytoplasma
Length = 93
Score = 39.1 bits (87), Expect = 0.064
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 376
I P VG + +YNG+ V I M+GH LGEFS T
Sbjct: 40 ITPIFVGHKIAVYNGREHIPVYITENMVGHKLGEFSPT 77
>UniRef50_Q6E790 Cluster: Ribosomal protein S19; n=6; Oomycetes|Rep:
Ribosomal protein S19 - Saprolegnia ferax
Length = 82
Score = 38.7 bits (86), Expect = 0.085
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +2
Query: 251 ENMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 382
+N++I+P+ + +YNG+ F +++I +M+G+ GEF T K
Sbjct: 28 KNLVIMPQDIDLTFNVYNGQNFIKLKIVKDMLGYKFGEFINTRK 71
>UniRef50_A1DE43 Cluster: Mitochondrial ribosomal protein S19,
putative; n=2; Pezizomycotina|Rep: Mitochondrial
ribosomal protein S19, putative - Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 89
Score = 38.3 bits (85), Expect = 0.11
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 382
I+P VG ++NGKT+ V I +M+G LGE+ T K
Sbjct: 40 ILPNFVGLRFAVHNGKTYQDVLITEDMVGRKLGEYVPTRK 79
>UniRef50_P0A4B5 Cluster: 30S ribosomal protein S19; n=47;
Bacteria|Rep: 30S ribosomal protein S19 - Streptococcus
pneumoniae
Length = 93
Score = 38.3 bits (85), Expect = 0.11
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 376
I P +G + +Y+G+ V I+ +M+GH LGEF+ T
Sbjct: 40 IFPSFIGYTIAVYDGRKHVPVYIQEDMVGHKLGEFAPT 77
>UniRef50_Q0QIR8 Cluster: Ribosomal protein S19; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S19 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 78
Score = 37.5 bits (83), Expect = 0.20
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 382
I+P +V I+NGK F + + E IGH GEF+ T K
Sbjct: 32 ILPSLVNKQYKIFNGKRFIRFRVTEETIGHKFGEFASTRK 71
>UniRef50_Q6UVU3 Cluster: Ribosomal protein S19; n=1;
Pseudendoclonium akinetum|Rep: Ribosomal protein S19 -
Pseudendoclonium akinetum (Green alga)
Length = 116
Score = 37.1 bits (82), Expect = 0.26
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYK 382
IVP M+G+ V I+ G F ++ I +G+ LGEF+ T K
Sbjct: 67 IVPGMIGNTVKIHTGHKFVKLSITEHTVGYKLGEFAPTKK 106
>UniRef50_P34772 Cluster: Plastid 30S ribosomal protein S19; n=1;
Euglena longa|Rep: Plastid 30S ribosomal protein S19 -
Astasia longa (Euglenophycean alga)
Length = 118
Score = 36.3 bits (80), Expect = 0.45
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 376
+ P MVG + +YNGK + I +MI LGEFS T
Sbjct: 40 VFPSMVGHNISVYNGKNYVPFLILNQMISSKLGEFSRT 77
>UniRef50_Q0CW10 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 152
Score = 35.9 bits (79), Expect = 0.60
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEF 367
I+P VG ++NGK + V I EM+G LGE+
Sbjct: 45 ILPNFVGLRFSVHNGKNYQDVLITEEMVGRKLGEY 79
>UniRef50_P0C478 Cluster: Chloroplast 30S ribosomal protein S19;
n=54; Eukaryota|Rep: Chloroplast 30S ribosomal protein
S19 - Oryza sativa (Rice)
Length = 93
Score = 35.9 bits (79), Expect = 0.60
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 376
I+P MVG + I+NGK + I M+G LGEF T
Sbjct: 39 ILPAMVGHTIAIHNGKEHIPIYITNPMVGRKLGEFVPT 76
>UniRef50_Q23889 Cluster: Ribosomal protein S19; n=2;
Dictyosteliida|Rep: Ribosomal protein S19 -
Dictyostelium discoideum (Slime mold)
Length = 87
Score = 35.1 bits (77), Expect = 1.0
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 260 IIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPG 406
+IVP + + +YNG+ + V+I + +G LGE+ +T K K+ G
Sbjct: 34 VIVPYYLTKTIYVYNGRKYVGVKITEKSLGRKLGEYVLTKKVEKYKASG 82
>UniRef50_Q8Y4F7 Cluster: Lmo2487 protein; n=13; Listeria|Rep:
Lmo2487 protein - Listeria monocytogenes
Length = 420
Score = 34.3 bits (75), Expect = 1.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 185 EAASRQERGSSE*EARDREDSLENMIIVPEMVGSIVGIYNGKTFNQVEIKP 337
E R E E ++DREDS+ NM+ G +G + F QV+ P
Sbjct: 92 ENHERDEEEGGENSSKDREDSMRNMVNDLSQAGEKIGSFLNSAFKQVKDMP 142
>UniRef50_Q9TAJ3 Cluster: Ribosomal protein S19; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein S19 - Cafeteria
roenbergensis
Length = 84
Score = 34.3 bits (75), Expect = 1.8
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGR 400
I+P ++ VG+++G TF ++ M+G+ LGEF T + ++G+
Sbjct: 38 ILPLIMNINVGVHDGYTFFKLTPNASMVGYKLGEFVRTRQAFRYGK 83
>UniRef50_A7QLC7 Cluster: Chromosome chr11 scaffold_118, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_118, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 86
Score = 34.3 bits (75), Expect = 1.8
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = -1
Query: 227 LLIRRSLFLGATQLLDQCHWFTFKTTSEPPARTGMH*FHELLIGHIKELIEINSPVSELP 48
LL R L +L DQ + +++ EP + G+ +L+ GH ++ I+I++ ELP
Sbjct: 18 LLTRWGLTFRLAKLFDQGRGLSLQSSLEPSSSIGVTELDKLINGHAEKCIQIDTLEVELP 77
Query: 47 E 45
E
Sbjct: 78 E 78
>UniRef50_A6BM61 Cluster: Ribosomal protein S19; n=1; Gnetum
parvifolium|Rep: Ribosomal protein S19 - Gnetum
parvifolium
Length = 115
Score = 34.3 bits (75), Expect = 1.8
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 263 IVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 376
IVPEMVG ++NGK V I M+ LG+F+ T
Sbjct: 56 IVPEMVGYTFAVHNGKEHLPVYITENMLYQKLGDFAPT 93
>UniRef50_A3I9K3 Cluster: AAA ATPase; n=1; Bacillus sp. B14905|Rep:
AAA ATPase - Bacillus sp. B14905
Length = 569
Score = 33.1 bits (72), Expect = 4.2
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 284 SIVGIYNGKT-----FNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFI 436
S+VG+ N K N ++I+ + H L F +TY V G PG G T +R I
Sbjct: 302 SLVGLPNAKKELHNLINFIKIQSLRVDHGLTSFPITYHLVFFGNPGTGKTTVARII 357
>UniRef50_A7QBJ9 Cluster: Chromosome chr13 scaffold_74, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_74, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 101
Score = 32.3 bits (70), Expect = 7.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 260 IIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVT 376
I++P M+G + I+NG + I M+ H L +FS T
Sbjct: 48 IVIPTMIGHTITIHNGNEHLLIYITDCMVDHKLAKFSST 86
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,978,296
Number of Sequences: 1657284
Number of extensions: 8908437
Number of successful extensions: 20742
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 20202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20730
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -