Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30466
         (539 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB...   138   3e-33
AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p pro...   137   1e-32
AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA...   137   1e-32

>AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB,
           isoform B protein.
          Length = 147

 Score =  138 bits (335), Expect = 3e-33
 Identities = 65/83 (78%), Positives = 70/83 (84%)
 Frame = +3

Query: 6   MAEVDETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVK 185
           M +VDE LKKKR F+KFTYRGVDLDQLLDMPN QL+ELMH         GLKRKPMAL+K
Sbjct: 1   MQQVDENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIK 60

Query: 186 KLRRAKKEAPPNEKPEIVKTHLR 254
           KLR+AKKEAPPNEKPEIVKTHLR
Sbjct: 61  KLRKAKKEAPPNEKPEIVKTHLR 83



 Score =  131 bits (317), Expect = 5e-31
 Identities = 57/66 (86%), Positives = 62/66 (93%)
 Frame = +2

Query: 248 LENMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 427
           L NMIIVPEM GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHGRPGIGATHSS
Sbjct: 82  LRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSS 141

Query: 428 RFIPLK 445
           RFIPLK
Sbjct: 142 RFIPLK 147


>AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p
           protein.
          Length = 148

 Score =  137 bits (331), Expect = 1e-32
 Identities = 64/81 (79%), Positives = 69/81 (85%)
 Frame = +3

Query: 12  EVDETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKL 191
           +VDE LKKKR F+KFTYRGVDLDQLLDMPN QL+ELMH         GLKRKPMAL+KKL
Sbjct: 4   QVDENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKL 63

Query: 192 RRAKKEAPPNEKPEIVKTHLR 254
           R+AKKEAPPNEKPEIVKTHLR
Sbjct: 64  RKAKKEAPPNEKPEIVKTHLR 84



 Score =  131 bits (317), Expect = 5e-31
 Identities = 57/66 (86%), Positives = 62/66 (93%)
 Frame = +2

Query: 248 LENMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 427
           L NMIIVPEM GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHGRPGIGATHSS
Sbjct: 83  LRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSS 142

Query: 428 RFIPLK 445
           RFIPLK
Sbjct: 143 RFIPLK 148


>AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA,
           isoform A protein.
          Length = 148

 Score =  137 bits (331), Expect = 1e-32
 Identities = 64/81 (79%), Positives = 69/81 (85%)
 Frame = +3

Query: 12  EVDETLKKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKL 191
           +VDE LKKKR F+KFTYRGVDLDQLLDMPN QL+ELMH         GLKRKPMAL+KKL
Sbjct: 4   QVDENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLKRKPMALIKKL 63

Query: 192 RRAKKEAPPNEKPEIVKTHLR 254
           R+AKKEAPPNEKPEIVKTHLR
Sbjct: 64  RKAKKEAPPNEKPEIVKTHLR 84



 Score =  131 bits (317), Expect = 5e-31
 Identities = 57/66 (86%), Positives = 62/66 (93%)
 Frame = +2

Query: 248 LENMIIVPEMVGSIVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSS 427
           L NMIIVPEM GSI+G+YNGK F QVE+KPEMIGHYLGEF++TYKPVKHGRPGIGATHSS
Sbjct: 83  LRNMIIVPEMTGSIIGVYNGKDFGQVEVKPEMIGHYLGEFALTYKPVKHGRPGIGATHSS 142

Query: 428 RFIPLK 445
           RFIPLK
Sbjct: 143 RFIPLK 148


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,031,335
Number of Sequences: 53049
Number of extensions: 418427
Number of successful extensions: 1078
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)