Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30465
(766 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel prot... 34 0.64
EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel prot... 34 0.64
EF179185-1|ABN05288.1| 2015|Homo sapiens sodium channel, voltage... 34 0.64
DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein ... 34 0.64
AY148488-1|AAN61120.1| 2015|Homo sapiens cardiac sodium channel ... 34 0.64
AB208866-1|BAD92103.1| 1576|Homo sapiens voltage-gated sodium ch... 34 0.64
AB158470-1|BAD12085.1| 1962|Homo sapiens TTX-resistant sodium ch... 34 0.64
AB158469-1|BAD12084.1| 2016|Homo sapiens TTX-resistant sodium ch... 34 0.64
X04393-1|CAA27981.1| 545|Homo sapiens complement C8-beta propet... 33 1.1
M16973-1|AAA51862.1| 591|Homo sapiens C8B protein. 33 1.1
BC130575-1|AAI30576.1| 591|Homo sapiens complement component 8,... 33 1.1
AL121998-1|CAC18532.1| 591|Homo sapiens complement component 8,... 33 1.1
U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein. 31 3.4
AK131259-1|BAD18437.1| 512|Homo sapiens protein. 31 3.4
AK127459-1|BAC86988.1| 238|Homo sapiens protein ( Homo sapiens ... 31 3.4
X03145-4|CAA26918.1| 140|Homo sapiens protein ( Human KpnI repe... 31 6.0
M77235-1|AAA58644.1| 2016|Homo sapiens sodium channel alpha subu... 31 6.0
BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA seq... 31 6.0
AY038064-1|AAK74065.1| 2015|Homo sapiens voltage-gated sodium ch... 31 6.0
AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA seq... 31 6.0
AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA seq... 31 6.0
AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA seq... 31 6.0
AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA seq... 31 6.0
AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA seq... 31 6.0
AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA seq... 31 6.0
AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA seq... 31 6.0
AK027344-1|BAB55049.1| 741|Homo sapiens protein ( Homo sapiens ... 31 6.0
AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein. 31 6.0
AF482988-1|AAO91669.1| 2015|Homo sapiens cardiac sodium channel ... 31 6.0
AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein. 31 6.0
AY507106-1|AAS87020.1| 1043|Homo sapiens NMDA receptor subunit 3... 30 7.9
AY435145-1|AAR95646.1| 402|Homo sapiens I-branching beta-1,6-ac... 30 7.9
AL833902-1|CAD38758.1| 545|Homo sapiens hypothetical protein pr... 30 7.9
AL139039-2|CAH73009.1| 226|Homo sapiens protein ( Human DNA seq... 30 7.9
AK090483-1|BAC03464.1| 402|Homo sapiens FLJ00405 protein protein. 30 7.9
AK000407-1|BAA91144.1| 310|Homo sapiens protein ( Homo sapiens ... 30 7.9
AF525164-1|AAQ08897.1| 524|Homo sapiens DERPC protein. 30 7.9
AF458024-1|AAM73864.1| 402|Homo sapiens I beta-1,6-N-acetylgluc... 30 7.9
AB078432-1|BAC66781.1| 401|Homo sapiens beta-1,6-N-acetylglucos... 30 7.9
>EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel
protein.
Length = 1998
Score = 33.9 bits (74), Expect = 0.64
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 113 RQSLAQRFDFQTIQHGCAG*SRAHHTGLLVE-PLFSISSRGNP 238
R+ L DF ++ AG S +HHT LLV PL S++G P
Sbjct: 534 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP 576
>EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel
protein.
Length = 2016
Score = 33.9 bits (74), Expect = 0.64
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 113 RQSLAQRFDFQTIQHGCAG*SRAHHTGLLVE-PLFSISSRGNP 238
R+ L DF ++ AG S +HHT LLV PL S++G P
Sbjct: 534 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP 576
>EF179185-1|ABN05288.1| 2015|Homo sapiens sodium channel,
voltage-gated, type V, alpha (long QT syndrome 3)
protein.
Length = 2015
Score = 33.9 bits (74), Expect = 0.64
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 113 RQSLAQRFDFQTIQHGCAG*SRAHHTGLLVE-PLFSISSRGNP 238
R+ L DF ++ AG S +HHT LLV PL S++G P
Sbjct: 534 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP 576
>DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein
type V alpha subunit protein.
Length = 2016
Score = 33.9 bits (74), Expect = 0.64
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 113 RQSLAQRFDFQTIQHGCAG*SRAHHTGLLVE-PLFSISSRGNP 238
R+ L DF ++ AG S +HHT LLV PL S++G P
Sbjct: 534 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP 576
>AY148488-1|AAN61120.1| 2015|Homo sapiens cardiac sodium channel
alpha subunit Nav1.5 protein.
Length = 2015
Score = 33.9 bits (74), Expect = 0.64
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 113 RQSLAQRFDFQTIQHGCAG*SRAHHTGLLVE-PLFSISSRGNP 238
R+ L DF ++ AG S +HHT LLV PL S++G P
Sbjct: 534 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP 576
>AB208866-1|BAD92103.1| 1576|Homo sapiens voltage-gated sodium
channel type V alpha isoform b variant protein.
Length = 1576
Score = 33.9 bits (74), Expect = 0.64
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 113 RQSLAQRFDFQTIQHGCAG*SRAHHTGLLVE-PLFSISSRGNP 238
R+ L DF ++ AG S +HHT LLV PL S++G P
Sbjct: 113 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP 155
>AB158470-1|BAD12085.1| 1962|Homo sapiens TTX-resistant sodium
channel splicing variant protein.
Length = 1962
Score = 33.9 bits (74), Expect = 0.64
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 113 RQSLAQRFDFQTIQHGCAG*SRAHHTGLLVE-PLFSISSRGNP 238
R+ L DF ++ AG S +HHT LLV PL S++G P
Sbjct: 534 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP 576
>AB158469-1|BAD12084.1| 2016|Homo sapiens TTX-resistant sodium
channel protein.
Length = 2016
Score = 33.9 bits (74), Expect = 0.64
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 113 RQSLAQRFDFQTIQHGCAG*SRAHHTGLLVE-PLFSISSRGNP 238
R+ L DF ++ AG S +HHT LLV PL S++G P
Sbjct: 534 RRDLGSEADFADDENSTAGESESHHTSLLVPWPLRRTSAQGQP 576
>X04393-1|CAA27981.1| 545|Homo sapiens complement C8-beta propetide
/map='1p36.2- p22.1'on) protein.
Length = 545
Score = 33.1 bits (72), Expect = 1.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 579 GLTKESNRGCEIPPPNTGGNPCGAP 505
G K R C PPP GG+PC P
Sbjct: 513 GRRKTRQRQCNNPPPQNGGSPCSGP 537
>M16973-1|AAA51862.1| 591|Homo sapiens C8B protein.
Length = 591
Score = 33.1 bits (72), Expect = 1.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 579 GLTKESNRGCEIPPPNTGGNPCGAP 505
G K R C PPP GG+PC P
Sbjct: 559 GRRKTRQRQCNNPPPQNGGSPCSGP 583
>BC130575-1|AAI30576.1| 591|Homo sapiens complement component 8,
beta polypeptide protein.
Length = 591
Score = 33.1 bits (72), Expect = 1.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 579 GLTKESNRGCEIPPPNTGGNPCGAP 505
G K R C PPP GG+PC P
Sbjct: 559 GRRKTRQRQCNNPPPQNGGSPCSGP 583
>AL121998-1|CAC18532.1| 591|Homo sapiens complement component 8,
beta polypeptide protein.
Length = 591
Score = 33.1 bits (72), Expect = 1.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 579 GLTKESNRGCEIPPPNTGGNPCGAP 505
G K R C PPP GG+PC P
Sbjct: 559 GRRKTRQRQCNNPPPQNGGSPCSGP 583
>U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/89 (22%), Positives = 38/89 (42%)
Frame = +3
Query: 27 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSN 206
R + +++ +NR K + D KAFDK+ ++ L +G+ + IIR
Sbjct: 577 RKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDK 636
Query: 207 RSFRYRVEGTRSSPRPSQLESRKALSSHP 293
+ R+ G + P + +R+ P
Sbjct: 637 PTANIRLNGQKLEAFPLKTGTRQGCPLSP 665
>AK131259-1|BAD18437.1| 512|Homo sapiens protein.
Length = 512
Score = 31.5 bits (68), Expect = 3.4
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 163 TPMLNSLKIKPLCQTLSNAFA-TSKKRAPVYNGFGRLSPTRMCSVRRCTC*TH 8
TP L SL K Q +S A A +S KR Y+ + LS T CSV RC TH
Sbjct: 21 TPFL-SLPPKVANQPMSAAAAGSSLKRQLSYSRYLALSSTNTCSVCRCLSLTH 72
>AK127459-1|BAC86988.1| 238|Homo sapiens protein ( Homo sapiens
cDNA FLJ45551 fis, clone BRTHA2037247. ).
Length = 238
Score = 31.5 bits (68), Expect = 3.4
Identities = 19/80 (23%), Positives = 34/80 (42%)
Frame = +3
Query: 54 LNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEG 233
+NR K + D KAF+K+ H ++ L +G+ + IIR R+ + G
Sbjct: 17 INRTKDKNHMIISIDAEKAFNKIQHRFMLKTLNKLGIEGPCLKIIRAICDKRTANIILNG 76
Query: 234 TRSSPRPSQLESRKALSSHP 293
+ P + +R+ P
Sbjct: 77 QQLEAFPLKTGTRQGCPLSP 96
>X03145-4|CAA26918.1| 140|Homo sapiens protein ( Human KpnI
repetitive sequence (T-betaG41) 3kb downstream of
beta-globin gene. ).
Length = 140
Score = 30.7 bits (66), Expect = 6.0
Identities = 22/99 (22%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +3
Query: 3 HSCVQQV--HRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSL 176
H C ++ H + +I+ +NR K + D KAFDK+ ++ L +G+ +
Sbjct: 5 HPCHARLVQHTKSINIIQHINRTKDTNHMIISIDAEKAFDKIQQCFMLKTLNKLGIDGTY 64
Query: 177 VLIIRDFLSNRSFRYRVEGTRSSPRPSQLESRKALSSHP 293
+ IIR + + G + P + +R+ P
Sbjct: 65 LKIIRAIYDKPTANIILSGQKLEAFPLKTGTRQGCPLSP 103
>M77235-1|AAA58644.1| 2016|Homo sapiens sodium channel alpha subunit
protein.
Length = 2016
Score = 30.7 bits (66), Expect = 6.0
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 113 RQSLAQRFDFQTIQHGCAG*SRAHHTGLLVE-PLFSISSRGNP 238
R+ L DF ++ A S +HHT LLV PL S++G P
Sbjct: 534 RRDLGSEADFADDENSTARESESHHTSLLVPWPLRRTSAQGQP 576
>BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone RP11-465I11 on chromosome 1 Contains part of
the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 30.7 bits (66), Expect = 6.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 558 RGCEIPPPNTGGNPCGAP 505
R C+ PPP+ GG CG P
Sbjct: 4782 RTCDNPPPSNGGRACGGP 4799
>AY038064-1|AAK74065.1| 2015|Homo sapiens voltage-gated sodium
channel type V alpha subunit jejunal variant protein.
Length = 2015
Score = 30.7 bits (66), Expect = 6.0
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 113 RQSLAQRFDFQTIQHGCAG*SRAHHTGLLVE-PLFSISSRGNP 238
R+ L DF ++ A S +HHT LLV PL S++G P
Sbjct: 534 RRDLGSEADFADDENSTARESESHHTSLLVPWPLRRTSAQGQP 576
>AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-268N14 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 30.7 bits (66), Expect = 6.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 558 RGCEIPPPNTGGNPCGAP 505
R C+ PPP+ GG CG P
Sbjct: 4782 RTCDNPPPSNGGRACGGP 4799
>AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-77J13 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 30.7 bits (66), Expect = 6.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 558 RGCEIPPPNTGGNPCGAP 505
R C+ PPP+ GG CG P
Sbjct: 4782 RTCDNPPPSNGGRACGGP 4799
>AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-164L12 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 30.7 bits (66), Expect = 6.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 558 RGCEIPPPNTGGNPCGAP 505
R C+ PPP+ GG CG P
Sbjct: 4782 RTCDNPPPSNGGRACGGP 4799
>AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-174L6 on chromosome 1 Contains the3' end
of the gene for hemicentin, the PRG4 gene for
proteoglycan 4 ).
Length = 5635
Score = 30.7 bits (66), Expect = 6.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 558 RGCEIPPPNTGGNPCGAP 505
R C+ PPP+ GG CG P
Sbjct: 4782 RTCDNPPPSNGGRACGGP 4799
>AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-153O3 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 30.7 bits (66), Expect = 6.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 558 RGCEIPPPNTGGNPCGAP 505
R C+ PPP+ GG CG P
Sbjct: 4782 RTCDNPPPSNGGRACGGP 4799
>AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-118G19 on chromosome 1q25.1-31.1 Contains
the 5' end of the gene for hemicentin. ).
Length = 5635
Score = 30.7 bits (66), Expect = 6.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 558 RGCEIPPPNTGGNPCGAP 505
R C+ PPP+ GG CG P
Sbjct: 4782 RTCDNPPPSNGGRACGGP 4799
>AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-248A21 on chromosome 1q31.1-31.3 Contains
part of the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 30.7 bits (66), Expect = 6.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 558 RGCEIPPPNTGGNPCGAP 505
R C+ PPP+ GG CG P
Sbjct: 4782 RTCDNPPPSNGGRACGGP 4799
>AK027344-1|BAB55049.1| 741|Homo sapiens protein ( Homo sapiens
cDNA FLJ14438 fis, clone HEMBB1000317, weakly similar to
FIBULIN-1, ISOFORM D PRECURSOR. ).
Length = 741
Score = 30.7 bits (66), Expect = 6.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 558 RGCEIPPPNTGGNPCGAP 505
R C+ PPP+ GG CG P
Sbjct: 5 RTCDNPPPSNGGRACGGP 22
>AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein.
Length = 2673
Score = 30.7 bits (66), Expect = 6.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 558 RGCEIPPPNTGGNPCGAP 505
R C+ PPP+ GG CG P
Sbjct: 1820 RTCDNPPPSNGGRACGGP 1837
>AF482988-1|AAO91669.1| 2015|Homo sapiens cardiac sodium channel
alpha subunit protein.
Length = 2015
Score = 30.7 bits (66), Expect = 6.0
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 113 RQSLAQRFDFQTIQHGCAG*SRAHHTGLLVE-PLFSISSRGNP 238
R+ L DF ++ AG S +H T LLV PL S++G P
Sbjct: 534 RRDLGSEADFADDENSTAGESESHRTSLLVPWPLRRTSAQGQP 576
>AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein.
Length = 5636
Score = 30.7 bits (66), Expect = 6.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 558 RGCEIPPPNTGGNPCGAP 505
R C+ PPP+ GG CG P
Sbjct: 4783 RTCDNPPPSNGGRACGGP 4800
>AY507106-1|AAS87020.1| 1043|Homo sapiens NMDA receptor subunit 3B
protein.
Length = 1043
Score = 30.3 bits (65), Expect = 7.9
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -2
Query: 342 WVGGDRGISLTNKLNRRGERTEPCGTPAVKVVGRSGFPRLDIEKSGSTRSP 190
WV G + ++ L R +P G PA VG +LD+E G++ P
Sbjct: 355 WVTGSSQVHMSRHLKVWSLRRDPRGAPAWATVGSWRDGQLDLEPGGASAWP 405
>AY435145-1|AAR95646.1| 402|Homo sapiens I-branching
beta-1,6-acetylglucosaminyltransferase family
polypeptide 1 protein.
Length = 402
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 139 IKPLCQTLSNAFATSKKRAPVYNGFGRLSPTRMC 38
+K L NAF SKK + VY G RL C
Sbjct: 140 VKQLLSCFPNAFLASKKESVVYGGISRLQADLNC 173
>AL833902-1|CAD38758.1| 545|Homo sapiens hypothetical protein
protein.
Length = 545
Score = 30.3 bits (65), Expect = 7.9
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 512 PHGFPPVLGGGISHPRLLSLVNPYPGPG---RSSTWALP 619
P G P G +S PR L+ P PGPG T ALP
Sbjct: 120 PRGMNPTGTGAVSFPRPGGLLGPGPGPGPTLNPRTGALP 158
>AL139039-2|CAH73009.1| 226|Homo sapiens protein ( Human DNA
sequence from clone RP11-360O19 on chromosome 6 Contains
anovel gene, a glucosaminyl (N-acetyl) transferase 1
core 2 ).
Length = 226
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 139 IKPLCQTLSNAFATSKKRAPVYNGFGRLSPTRMC 38
+K L NAF SKK + VY G RL C
Sbjct: 58 VKQLLSCFPNAFLASKKESVVYGGISRLQADLNC 91
>AK090483-1|BAC03464.1| 402|Homo sapiens FLJ00405 protein protein.
Length = 402
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 139 IKPLCQTLSNAFATSKKRAPVYNGFGRLSPTRMC 38
+K L NAF SKK + VY G RL C
Sbjct: 140 VKQLLSCFPNAFLASKKESVVYGGISRLQADLNC 173
>AK000407-1|BAA91144.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ20400 fis, clone KAT00587. ).
Length = 310
Score = 30.3 bits (65), Expect = 7.9
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 512 PHGFPPVLGGGISHPRLLSLVNPYPGPG---RSSTWALP 619
P G P G +S PR L+ P PGPG T ALP
Sbjct: 99 PRGMNPTGTGAVSFPRPGGLLGPGPGPGPTLNPRTGALP 137
>AF525164-1|AAQ08897.1| 524|Homo sapiens DERPC protein.
Length = 524
Score = 30.3 bits (65), Expect = 7.9
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +2
Query: 512 PHGFPPVLGGGISHPRLLSLVNPYPGPG---RSSTWALP 619
P G P G +S PR L+ P PGPG T ALP
Sbjct: 99 PRGMNPTGTGAVSFPRPGGLLGPGPGPGPTLNPRTGALP 137
>AF458024-1|AAM73864.1| 402|Homo sapiens I
beta-1,6-N-acetylglucosaminyltransferase A form protein.
Length = 402
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 139 IKPLCQTLSNAFATSKKRAPVYNGFGRLSPTRMC 38
+K L NAF SKK + VY G RL C
Sbjct: 140 VKQLLSCFPNAFLASKKESVVYGGISRLQADLNC 173
>AB078432-1|BAC66781.1| 401|Homo sapiens
beta-1,6-N-acetylglucosaminyltransferase 2 protein.
Length = 401
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 139 IKPLCQTLSNAFATSKKRAPVYNGFGRLSPTRMC 38
+K L NAF SKK + VY G RL C
Sbjct: 139 VKQLLSCFPNAFLASKKESVVYGGISRLQADLNC 172
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,533,939
Number of Sequences: 237096
Number of extensions: 3080164
Number of successful extensions: 11981
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 11291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11981
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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