Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30465
(766 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 70 4e-12
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 67 2e-11
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 67 2e-11
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 66 4e-11
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 66 4e-11
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 66 4e-11
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 66 4e-11
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 66 4e-11
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 64 2e-10
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 64 2e-10
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 63 5e-10
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 63 5e-10
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 61 1e-09
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 61 1e-09
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 61 1e-09
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 61 1e-09
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 60 3e-09
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 59 8e-09
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 58 1e-08
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 57 2e-08
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 56 5e-08
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 43 4e-04
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 38 0.011
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 38 0.015
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 33 0.43
AY069347-1|AAL39492.1| 396|Drosophila melanogaster LD05576p pro... 32 0.75
AE014134-3030|AAF53752.1| 396|Drosophila melanogaster CG10495-P... 32 0.75
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 29 7.0
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 69.7 bits (163), Expect = 4e-12
Identities = 35/83 (42%), Positives = 52/83 (62%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
HS V+QVHRLT+HIL + + Y A+F D+ +AFD+VWH+GLI K+ + P
Sbjct: 556 HSTVEQVHRLTKHILQAFDDKE--YCNAVFIDMQQAFDRVWHDGLISKVKKL-FPAPYYG 612
Query: 183 IIRDFLSNRSFRYRVEGTRSSPR 251
+++ +L +R F RV + S PR
Sbjct: 613 VLKSYLEDRRFMVRVRNSYSIPR 635
Score = 50.0 bits (114), Expect = 3e-06
Identities = 25/72 (34%), Positives = 41/72 (56%)
Frame = +1
Query: 547 LTPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMS 726
+T PI L + + KYLG+TLD +TF PH+K+ R + +L ++ ++S M+
Sbjct: 734 VTAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMT 793
Query: 727 LRNKVTLYKTCI 762
LR K +Y C+
Sbjct: 794 LRAKRAVYVHCV 805
Score = 46.8 bits (106), Expect = 3e-05
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Frame = +2
Query: 212 FSISSRGNPLLPTTFTAGVPQGXXXXXXXXXXXXNDIPRSPPTH--------LALFADDT 367
F + R + +P AGVPQG D+P H LA +ADD
Sbjct: 623 FMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDI 682
Query: 368 TVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKS 484
+ YSS + A+ LQ L W ++W + +NP K+
Sbjct: 683 ALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKT 721
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 67.3 bits (157), Expect = 2e-11
Identities = 36/104 (34%), Positives = 61/104 (58%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL + +P +L +
Sbjct: 600 HGSEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 656
Query: 183 IIRDFLSNRSFRYRVEGTRSSPRPSQLESRKALSSHPSYLAYSL 314
I+ +L+NR+F + + +S R Q+ + S+ L YS+
Sbjct: 657 ILESYLTNRTFEVKDQAGETS-RTGQIGAGVPQGSNLGPLLYSI 699
Score = 40.7 bits (91), Expect = 0.002
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = +2
Query: 260 AGVPQGXXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKL 415
AGVPQG +D+P R PT L+ +ADDT V S + +
Sbjct: 684 AGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNN 743
Query: 416 QSAALALGQWFRKWRIDINPAKSTAVLF 499
++ + W KW I +N AK+ V+F
Sbjct: 744 ENYLKSFSDWADKWGISVNAAKTGHVIF 771
Score = 33.1 bits (72), Expect = 0.43
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +1
Query: 574 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 753
Q I K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ + K
Sbjct: 789 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 848
Query: 754 TCI 762
+ +
Sbjct: 849 SVL 851
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 67.3 bits (157), Expect = 2e-11
Identities = 36/104 (34%), Positives = 61/104 (58%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL + +P +L +
Sbjct: 612 HGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 668
Query: 183 IIRDFLSNRSFRYRVEGTRSSPRPSQLESRKALSSHPSYLAYSL 314
I+ +L+NR+F + + +S R Q+ + S+ L YS+
Sbjct: 669 ILESYLTNRTFEVKDQAGETS-RTGQIGAGVPQGSNLGPLLYSI 711
Score = 40.3 bits (90), Expect = 0.003
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Frame = +2
Query: 260 AGVPQGXXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKL 415
AGVPQG +D+P R PT L+ +ADDT V S + +
Sbjct: 696 AGVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNN 755
Query: 416 QSAALALGQWFRKWRIDINPAKSTAVLF 499
++ W KW I +N AK+ V+F
Sbjct: 756 ENYLKTFSDWADKWGISVNAAKTGHVIF 783
Score = 37.1 bits (82), Expect = 0.026
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +1
Query: 559 ITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNK 738
+ + Q+I K YLGVTLD+ +T H+ + + + +L ++ RSK+ + K
Sbjct: 796 VKIKGQTIKKESKQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTK 855
Query: 739 VTLYKTCI 762
+ + K+ +
Sbjct: 856 ILILKSVL 863
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 66.5 bits (155), Expect = 4e-11
Identities = 35/104 (33%), Positives = 61/104 (58%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL + +P +L +
Sbjct: 484 HGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 540
Query: 183 IIRDFLSNRSFRYRVEGTRSSPRPSQLESRKALSSHPSYLAYSL 314
I+ +L+NR+F + + +S R Q+ + S+ + YS+
Sbjct: 541 ILESYLTNRTFEVKDQAGETS-RAGQIGAGVPQGSNLGPILYSI 583
Score = 36.3 bits (80), Expect = 0.046
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Frame = +2
Query: 260 AGVPQGXXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKL 415
AGVPQG +D+P PT L+ +ADDT V S + +
Sbjct: 568 AGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNN 627
Query: 416 QSAALALGQWFRKWRIDINPAKSTAVLF 499
++ W KW I +N AK+ V++
Sbjct: 628 ENYLKTFSDWADKWGISVNAAKTGHVIY 655
Score = 36.3 bits (80), Expect = 0.046
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 574 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 753
Q+I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K
Sbjct: 673 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 732
Query: 754 TCI 762
+ +
Sbjct: 733 SVL 735
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 66.5 bits (155), Expect = 4e-11
Identities = 35/104 (33%), Positives = 61/104 (58%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL + +P +L +
Sbjct: 600 HGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 656
Query: 183 IIRDFLSNRSFRYRVEGTRSSPRPSQLESRKALSSHPSYLAYSL 314
I+ +L+NR+F + + +S R Q+ + S+ + YS+
Sbjct: 657 ILESYLTNRTFEVKDQAGETS-RAGQIGAGVPQGSNLGPILYSI 699
Score = 36.3 bits (80), Expect = 0.046
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Frame = +2
Query: 260 AGVPQGXXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKL 415
AGVPQG +D+P PT L+ +ADDT V S + +
Sbjct: 684 AGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNN 743
Query: 416 QSAALALGQWFRKWRIDINPAKSTAVLF 499
++ W KW I +N AK+ V++
Sbjct: 744 ENYLKTFSDWADKWGISVNAAKTGHVIY 771
Score = 36.3 bits (80), Expect = 0.046
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 574 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 753
Q+I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K
Sbjct: 789 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 848
Query: 754 TCI 762
+ +
Sbjct: 849 SVL 851
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 66.5 bits (155), Expect = 4e-11
Identities = 35/104 (33%), Positives = 61/104 (58%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL + +P +L +
Sbjct: 600 HGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 656
Query: 183 IIRDFLSNRSFRYRVEGTRSSPRPSQLESRKALSSHPSYLAYSL 314
I+ +L+NR+F + + +S R Q+ + S+ + YS+
Sbjct: 657 ILESYLTNRTFEVKDQAGETS-RAGQIGAGVPQGSNLGPILYSI 699
Score = 36.3 bits (80), Expect = 0.046
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Frame = +2
Query: 260 AGVPQGXXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKL 415
AGVPQG +D+P PT L+ +ADDT V S + +
Sbjct: 684 AGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNN 743
Query: 416 QSAALALGQWFRKWRIDINPAKSTAVLF 499
++ W KW I +N AK+ V++
Sbjct: 744 ENYLKTFSDWADKWGISVNAAKTGHVIY 771
Score = 36.3 bits (80), Expect = 0.046
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 574 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 753
Q+I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K
Sbjct: 789 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 848
Query: 754 TCI 762
+ +
Sbjct: 849 SVL 851
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 66.5 bits (155), Expect = 4e-11
Identities = 35/104 (33%), Positives = 61/104 (58%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL + +P +L +
Sbjct: 562 HGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 618
Query: 183 IIRDFLSNRSFRYRVEGTRSSPRPSQLESRKALSSHPSYLAYSL 314
I+ +L+NR+F + + +S R Q+ + S+ + YS+
Sbjct: 619 ILESYLTNRTFEVKDQAGETS-RAGQIGAGVPQGSNLGPILYSI 661
Score = 36.3 bits (80), Expect = 0.046
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Frame = +2
Query: 260 AGVPQGXXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKL 415
AGVPQG +D+P PT L+ +ADDT V S + +
Sbjct: 646 AGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNN 705
Query: 416 QSAALALGQWFRKWRIDINPAKSTAVLF 499
++ W KW I +N AK+ V++
Sbjct: 706 ENYLKTFSDWADKWGISVNAAKTGHVIY 733
Score = 36.3 bits (80), Expect = 0.046
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 574 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 753
Q+I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K
Sbjct: 751 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 810
Query: 754 TCI 762
+ +
Sbjct: 811 SVL 813
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 66.5 bits (155), Expect = 4e-11
Identities = 35/104 (33%), Positives = 61/104 (58%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL + +P +L +
Sbjct: 600 HGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYI 656
Query: 183 IIRDFLSNRSFRYRVEGTRSSPRPSQLESRKALSSHPSYLAYSL 314
I+ +L+NR+F + + +S R Q+ + S+ + YS+
Sbjct: 657 ILESYLTNRTFEVKDQAGETS-RAGQIGAGVPQGSNLGPILYSI 699
Score = 36.3 bits (80), Expect = 0.046
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Frame = +2
Query: 260 AGVPQGXXXXXXXXXXXXNDIP-----RSPPTH---LALFADDTTVYYSSRNKSLIAKKL 415
AGVPQG +D+P PT L+ +ADDT V S + +
Sbjct: 684 AGVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNN 743
Query: 416 QSAALALGQWFRKWRIDINPAKSTAVLF 499
++ W KW I +N AK+ V++
Sbjct: 744 ENYLKTFSDWADKWGISVNAAKTGHVIY 771
Score = 36.3 bits (80), Expect = 0.046
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 574 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 753
Q+I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ K+ + K
Sbjct: 789 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILK 848
Query: 754 TCI 762
+ +
Sbjct: 849 SVL 851
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 64.1 bits (149), Expect = 2e-10
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +2
Query: 197 LVEPLFSISSRGNPLLPTTFTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVY 376
L FS++ + AGVPQG +DIP++ L+LFADD VY
Sbjct: 643 LTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVY 702
Query: 377 YSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF-QRGAPHGFP 526
+ + S I + +QS L +++KW+I INP K+ A+ F +R P P
Sbjct: 703 SAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPRYLP 753
Score = 56.4 bits (130), Expect = 4e-08
Identities = 22/66 (33%), Positives = 40/66 (60%)
Frame = +1
Query: 559 ITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNK 738
+ + I W ++YLG+ D +TF+ HI + + I+ LYP+I ++SK+S+ NK
Sbjct: 757 LRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNK 816
Query: 739 VTLYKT 756
+ ++KT
Sbjct: 817 IIIFKT 822
Score = 51.6 bits (118), Expect = 1e-06
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +3
Query: 81 GALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPR 251
G + D+ AFD VWH+GL+ KL +G P L+ I+++FL++R F + ++S+ R
Sbjct: 604 GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARR 660
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 64.1 bits (149), Expect = 2e-10
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +2
Query: 197 LVEPLFSISSRGNPLLPTTFTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVY 376
L FS++ + AGVPQG +DIP++ L+LFADD VY
Sbjct: 591 LTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVY 650
Query: 377 YSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF-QRGAPHGFP 526
+ + S I + +QS L +++KW+I INP K+ A+ F +R P P
Sbjct: 651 SAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPRYLP 701
Score = 56.4 bits (130), Expect = 4e-08
Identities = 22/66 (33%), Positives = 40/66 (60%)
Frame = +1
Query: 559 ITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNK 738
+ + I W ++YLG+ D +TF+ HI + + I+ LYP+I ++SK+S+ NK
Sbjct: 705 LRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNK 764
Query: 739 VTLYKT 756
+ ++KT
Sbjct: 765 IIIFKT 770
Score = 51.6 bits (118), Expect = 1e-06
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +3
Query: 81 GALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPR 251
G + D+ AFD VWH+GL+ KL +G P L+ I+++FL++R F + ++S+ R
Sbjct: 552 GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARR 608
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 62.9 bits (146), Expect = 5e-10
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H +Q+HR+ L + + Y F D+ +AFD+VWH GL++K + P L L
Sbjct: 557 HGTPEQLHRVVNFALEAMENKE--YAVGAFLDIQQAFDRVWHPGLLYKAKRL-FPPQLYL 613
Query: 183 IIRDFLSNRSFRYRVEGTRSSPRP 254
+++ FL R+F V+G +SS +P
Sbjct: 614 VVKSFLEERTFHVSVDGYKSSIKP 637
Score = 48.4 bits (110), Expect = 1e-05
Identities = 24/70 (34%), Positives = 41/70 (58%)
Frame = +1
Query: 553 PPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLR 732
P ++L + I + KYLG+TLD +TF HI +++ + R+ +I R+K+SL
Sbjct: 735 PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLG 794
Query: 733 NKVTLYKTCI 762
KV +YK+ +
Sbjct: 795 CKVNIYKSIL 804
Score = 42.3 bits (95), Expect = 7e-04
Identities = 32/109 (29%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Frame = +2
Query: 197 LVEPLFSISSRGNPLLPTTFTAGVPQGXXXXXXXXXXXXNDIPRSPPTH--------LAL 352
L E F +S G AGVPQG +D+P P +A
Sbjct: 619 LEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIAT 678
Query: 353 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 499
+ADDT V S++ LQ A QW W + IN K V F
Sbjct: 679 YADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTF 727
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 62.9 bits (146), Expect = 5e-10
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H +Q+HR+ L + + Y F D+ +AFD+VWH GL++K + P L L
Sbjct: 359 HGTPEQLHRVVNFALEAMENKE--YAVGAFLDIQQAFDRVWHPGLLYKAKRL-FPPQLYL 415
Query: 183 IIRDFLSNRSFRYRVEGTRSSPRP 254
+++ FL R+F V+G +SS +P
Sbjct: 416 VVKSFLEERTFHVSVDGYKSSIKP 439
Score = 48.4 bits (110), Expect = 1e-05
Identities = 24/70 (34%), Positives = 41/70 (58%)
Frame = +1
Query: 553 PPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLR 732
P ++L + I + KYLG+TLD +TF HI +++ + R+ +I R+K+SL
Sbjct: 537 PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLG 596
Query: 733 NKVTLYKTCI 762
KV +YK+ +
Sbjct: 597 CKVNIYKSIL 606
Score = 42.3 bits (95), Expect = 7e-04
Identities = 32/109 (29%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Frame = +2
Query: 197 LVEPLFSISSRGNPLLPTTFTAGVPQGXXXXXXXXXXXXNDIPRSPPTH--------LAL 352
L E F +S G AGVPQG +D+P P +A
Sbjct: 421 LEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIAT 480
Query: 353 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 499
+ADDT V S++ LQ A QW W + IN K V F
Sbjct: 481 YADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTF 529
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 61.3 bits (142), Expect = 1e-09
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H Q+ R+T+ IL + A F D+ +AFD+VWH+GL++KL + +P L
Sbjct: 156 HGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFD 212
Query: 183 IIRDFLSNRSFRYRVEGTRSS 245
++ ++LSNR+F R++G +S
Sbjct: 213 LLENYLSNRTFSVRIDGETTS 233
Score = 35.5 bits (78), Expect = 0.080
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 323 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 496
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 275 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 334
Query: 497 F 499
F
Sbjct: 335 F 335
Score = 34.7 bits (76), Expect = 0.14
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +1
Query: 550 TPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSL 729
TPP+ + Q K +YLG+ LD +TF H+ ++ + +L +I K S +
Sbjct: 346 TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPK 404
Query: 730 RNKVTLYKTCI 762
K+ L+K +
Sbjct: 405 NAKILLWKQIV 415
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 61.3 bits (142), Expect = 1e-09
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H Q+ R+T+ IL + A F D+ +AFD+VWH+GL++KL + +P L
Sbjct: 603 HGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFD 659
Query: 183 IIRDFLSNRSFRYRVEGTRSS 245
++ ++LSNR+F R++G +S
Sbjct: 660 LLENYLSNRTFSVRIDGETTS 680
Score = 35.5 bits (78), Expect = 0.080
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 323 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 496
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 497 F 499
F
Sbjct: 782 F 782
Score = 34.7 bits (76), Expect = 0.14
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +1
Query: 550 TPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSL 729
TPP+ + Q K +YLG+ LD +TF H+ ++ + +L +I K S +
Sbjct: 793 TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPK 851
Query: 730 RNKVTLYKTCI 762
K+ L+K +
Sbjct: 852 NAKILLWKQIV 862
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 61.3 bits (142), Expect = 1e-09
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H Q+ R+T+ IL + A F D+ +AFD+VWH+GL++KL + +P L
Sbjct: 603 HGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFD 659
Query: 183 IIRDFLSNRSFRYRVEGTRSS 245
++ ++LSNR+F R++G +S
Sbjct: 660 LLENYLSNRTFSVRIDGETTS 680
Score = 35.5 bits (78), Expect = 0.080
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 323 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 496
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 497 F 499
F
Sbjct: 782 F 782
Score = 34.7 bits (76), Expect = 0.14
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +1
Query: 550 TPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSL 729
TPP+ + Q K +YLG+ LD +TF H+ ++ + +L +I K S +
Sbjct: 793 TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPK 851
Query: 730 RNKVTLYKTCI 762
K+ L+K +
Sbjct: 852 NAKILLWKQIV 862
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 61.3 bits (142), Expect = 1e-09
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H Q+ R+T+ IL + A F D+ +AFD+VWH+GL++KL + +P L
Sbjct: 603 HGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFD 659
Query: 183 IIRDFLSNRSFRYRVEGTRSS 245
++ ++LSNR+F R++G +S
Sbjct: 660 LLENYLSNRTFSVRIDGETTS 680
Score = 35.5 bits (78), Expect = 0.080
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 323 PRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVL 496
P PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +L
Sbjct: 722 PDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHIL 781
Query: 497 F 499
F
Sbjct: 782 F 782
Score = 34.7 bits (76), Expect = 0.14
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +1
Query: 550 TPPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSL 729
TPP+ + Q K +YLG+ LD +TF H+ ++ + +L +I K S +
Sbjct: 793 TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPK 851
Query: 730 RNKVTLYKTCI 762
K+ L+K +
Sbjct: 852 NAKILLWKQIV 862
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 60.1 bits (139), Expect = 3e-09
Identities = 29/81 (35%), Positives = 48/81 (59%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H ++QV+R+T I + Y ALF DVA+AFD+VW +GL+FK+ + +P ++
Sbjct: 92 HGAIEQVNRITTEIRTAFEHRE--YCTALFLDVAQAFDRVWLDGLMFKIIQL-LPQNIHK 148
Query: 183 IIRDFLSNRSFRYRVEGTRSS 245
+++ +L R F R + SS
Sbjct: 149 LLKSYLDKRVFAVRCSSSTSS 169
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +2
Query: 209 LFSISSRGNPLLPTTFTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSR 388
+F++ + T AGVPQG DIP + + FADDT + SR
Sbjct: 158 VFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIPTNYQLTIFTFADDTAIISRSR 217
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +1
Query: 553 PPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLR 732
PP+ + +P KYLGV LD +TF H+ +R R + + Y ++ RSK+SL
Sbjct: 730 PPVYIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLS 789
Query: 733 NKVTLYK 753
NK+T+YK
Sbjct: 790 NKLTIYK 796
Score = 53.2 bits (122), Expect = 4e-07
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H V+Q+HR+ E IL + + Y +LF D+ +AFD+VWH GL K+ +P
Sbjct: 555 HCTVEQLHRVVEQILTAYDSKE--YCNSLFLDIREAFDRVWHIGLQLKI-KQTLPAPYFG 611
Query: 183 IIRDFLSNRSFRYRVEGTRSS 245
+++ +L R F R S+
Sbjct: 612 LLKSYLEGRRFAVRFHSAIST 632
Score = 51.2 bits (117), Expect = 2e-06
Identities = 36/98 (36%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Frame = +2
Query: 260 AGVPQGXXXXXXXXXXXXNDIPRSP-----PTHLALFADDTTVYYSSRNKSLIAKKLQSA 424
AGVPQG +D+P+ + LA FADD V Y SR + A +Q
Sbjct: 638 AGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDF 697
Query: 425 ALALGQWFRKWRIDINPAKSTAVLF--QRGAPHGFPPV 532
A +W R+W I IN +KS V F +R P PPV
Sbjct: 698 AYRFSEWARRWNIGINSSKSNNVCFTLKRRTP---PPV 732
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 58.4 bits (135), Expect = 1e-08
Identities = 28/80 (35%), Positives = 48/80 (60%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H ++QV+R+T I + Y A+F DVA+AFD+VW +GL+FK+ + +P +
Sbjct: 551 HGTIEQVNRITSEIRTAFEHRE--YCTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHK 607
Query: 183 IIRDFLSNRSFRYRVEGTRS 242
+++ +L NR F R + + S
Sbjct: 608 LLKSYLYNRVFAIRCDTSTS 627
Score = 46.8 bits (106), Expect = 3e-05
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +1
Query: 553 PPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLR 732
PP+ L + IP A +V YLGV LD +T+R HI++ L+ +I RS +SL
Sbjct: 721 PPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLE 780
Query: 733 NKVTLYKTCI 762
K LY + +
Sbjct: 781 FKALLYNSVL 790
Score = 39.1 bits (87), Expect = 0.007
Identities = 28/100 (28%), Positives = 37/100 (37%)
Frame = +2
Query: 260 AGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALG 439
AGVPQG D P + FADDT + S+ L ++
Sbjct: 634 AGVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVE 693
Query: 440 QWFRKWRIDINPAKSTAVLFQRGAPHGFPPVLGGGISHPR 559
+W WRI IN K V F PP++ I P+
Sbjct: 694 RWLADWRISINVQKCKQVTFTLN-KQTCPPLVLNNICIPQ 732
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 57.2 bits (132), Expect = 2e-08
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H ++QV+R+T I + Y A+F DV++AFDKVW +GL+FK+ + +P+S
Sbjct: 553 HGTIEQVNRITTEIRTAFEYRE--YCTAVFLDVSQAFDKVWLDGLMFKI-KISLPESTHK 609
Query: 183 IIRDFLSNRSFRYRVEGTRSSPRPSQLESRKALSSHPS-YLAYSLTIFPGRRRPI*LYSP 359
+++ +L +R F R S+ + + P+ YL Y+ I R + ++
Sbjct: 610 LLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIPTNSRLTVSTFAD 669
Query: 360 TTRLFT 377
T + +
Sbjct: 670 DTAILS 675
Score = 50.0 bits (114), Expect = 3e-06
Identities = 31/103 (30%), Positives = 43/103 (41%)
Frame = +2
Query: 251 TFTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAAL 430
T AGVPQG DIP + ++ FADDT + SR+ +L +
Sbjct: 633 TIEAGVPQGSVLGPTLYLIYTADIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLI 692
Query: 431 ALGQWFRKWRIDINPAKSTAVLFQRGAPHGFPPVLGGGISHPR 559
+ +W WRI +N K V F PP+L I P+
Sbjct: 693 DIKKWLSDWRIKVNEQKCKHVTFTLNR-QDCPPLLLNSIPLPK 734
Score = 48.4 bits (110), Expect = 1e-05
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +1
Query: 553 PPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLR 732
PP+ L S +P A +V YLGV LD +T+R HI++ + + L+ +I S +SL
Sbjct: 723 PPLLLNSIPLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLD 782
Query: 733 NKVTLYKTCI 762
+KV LY + +
Sbjct: 783 HKVLLYNSIL 792
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 56.0 bits (129), Expect = 5e-08
Identities = 27/80 (33%), Positives = 47/80 (58%)
Frame = +3
Query: 3 HSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVL 182
H ++QV+R+T I + Y A+F DVA+AFD+VW +GL+FK+ + +P +
Sbjct: 551 HGTIEQVNRITSEIRTAFEHRE--YCTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHK 607
Query: 183 IIRDFLSNRSFRYRVEGTRS 242
+++ +L N F R + + S
Sbjct: 608 LLKSYLYNTVFAIRCDTSTS 627
Score = 46.8 bits (106), Expect = 3e-05
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +1
Query: 553 PPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLR 732
PP+ L + IP A +V YLGV LD +T+R HI++ L+ +I RS +SL
Sbjct: 721 PPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLE 780
Query: 733 NKVTLYKTCI 762
K LY + +
Sbjct: 781 FKALLYNSVL 790
Score = 39.5 bits (88), Expect = 0.005
Identities = 31/121 (25%), Positives = 43/121 (35%)
Frame = +2
Query: 197 LVEPLFSISSRGNPLLPTTFTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVY 376
L +F+I + AGVPQG D P + FADDT +
Sbjct: 613 LYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNLTTSTFADDTAIL 672
Query: 377 YSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQRGAPHGFPPVLGGGISHP 556
S+ L ++ +W WRI IN K V F PP++ I P
Sbjct: 673 SRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTFTLN-KQTCPPLVLNNICIP 731
Query: 557 R 559
+
Sbjct: 732 Q 732
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 43.2 bits (97), Expect = 4e-04
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +1
Query: 553 PPITLFSQSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLR 732
P + +++P+ R +YLG+T+ M F HI S+R R ++G L ++ S R
Sbjct: 719 PTVRFAGRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPR 778
Query: 733 NKVTLY 750
+ T+Y
Sbjct: 779 ARRTIY 784
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 38.3 bits (85), Expect = 0.011
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +3
Query: 75 YTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSS 245
+ L D +AFD+V + ++ +L G+ L +I+ F++NRSFR R+ S+
Sbjct: 577 HVSILATDFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSN 633
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 37.9 bits (84), Expect = 0.015
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +3
Query: 72 LYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPR 251
++T + D ++AFD+V + +I +L ++ I++F+SNR RV SSP
Sbjct: 568 MHTSLVTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPL 627
Query: 252 P 254
P
Sbjct: 628 P 628
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 33.1 bits (72), Expect = 0.43
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +1
Query: 574 QSIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 753
Q I K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ + K
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 63
Query: 754 TCI 762
+ +
Sbjct: 64 SVL 66
>AY069347-1|AAL39492.1| 396|Drosophila melanogaster LD05576p
protein.
Length = 396
Score = 32.3 bits (70), Expect = 0.75
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -1
Query: 232 PSTRYRKERFDKKSRMMSTRLSGTPMLNSLKIKPLCQTLSNAFATSKKRAPVYNGFGRLS 53
P RY K F + R+ +L+ TPM+ S I + N F+T P+ F
Sbjct: 29 PMVRYSKLEFRRLVRLNGVQLAFTPMMISDSINNSEKARQNEFSTGADDQPLIAQFAAKD 88
Query: 52 PT 47
PT
Sbjct: 89 PT 90
>AE014134-3030|AAF53752.1| 396|Drosophila melanogaster CG10495-PA
protein.
Length = 396
Score = 32.3 bits (70), Expect = 0.75
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -1
Query: 232 PSTRYRKERFDKKSRMMSTRLSGTPMLNSLKIKPLCQTLSNAFATSKKRAPVYNGFGRLS 53
P RY K F + R+ +L+ TPM+ S I + N F+T P+ F
Sbjct: 29 PMVRYSKLEFRRLVRLNGVQLAFTPMMISDSINNSEKARQNEFSTGADDQPLIAQFAAKD 88
Query: 52 PT 47
PT
Sbjct: 89 PT 90
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 589 ARKVKYLGVTLDASMTFRPHIKSVRDRAAF---ILGRLYPMI 705
A +KYLGV +D ++F+ H + +AA L R+ P +
Sbjct: 714 AETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,241,635
Number of Sequences: 53049
Number of extensions: 899519
Number of successful extensions: 2741
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2726
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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