BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30464 (804 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q6DGH3 Cluster: Zgc:92922; n=13; Euteleostomi|Rep: Zgc:... 64 4e-09 UniRef50_P60468 Cluster: Protein transport protein Sec61 subunit... 62 1e-08 UniRef50_Q5BSB6 Cluster: SJCHGC05179 protein; n=3; Bilateria|Rep... 46 0.001 UniRef50_Q9WUG7 Cluster: ARL-6 interacting protein-3; n=1; Mus m... 46 0.001 UniRef50_A4RRJ9 Cluster: Predicted protein; n=1; Ostreococcus lu... 38 0.39 UniRef50_Q17Q79 Cluster: Sec61beta; n=2; Apansporoblastina|Rep: ... 36 1.6 UniRef50_A6R5C2 Cluster: Predicted protein; n=4; Ascomycota|Rep:... 35 2.8 UniRef50_Q8DMB1 Cluster: Tll0210 protein; n=1; Synechococcus elo... 33 8.4 UniRef50_Q01G20 Cluster: Protein transport protein subunit-like;... 33 8.4 UniRef50_Q1WAB9 Cluster: Sec61 beta subunit; n=1; Antonospora lo... 33 8.4 >UniRef50_Q6DGH3 Cluster: Zgc:92922; n=13; Euteleostomi|Rep: Zgc:92922 - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 97 Score = 64.1 bits (149), Expect = 4e-09 Identities = 34/67 (50%), Positives = 40/67 (59%) Frame = -2 Query: 455 SATSVGSGSRSPTKASAGPRTASGXXXXXXXXXXXXXXXXXXXXXAGSGGMWRFYTDDSP 276 SAT+VG+ SRSP+K A PRTA AG+GGMWRFYT+DSP Sbjct: 7 SATNVGASSRSPSKTVA-PRTAGTSARQRKATSSSARSGGRSTASAGTGGMWRFYTEDSP 65 Query: 275 GVKVGPV 255 G+KVGPV Sbjct: 66 GLKVGPV 72 Score = 52.4 bits (120), Expect = 1e-05 Identities = 24/28 (85%), Positives = 25/28 (89%) Frame = -1 Query: 264 GASSVLVMSLLFIASVFMLHIWGKYTRA 181 G VLVMSLLFIASVFMLHIWGKYTR+ Sbjct: 70 GPVPVLVMSLLFIASVFMLHIWGKYTRS 97 >UniRef50_P60468 Cluster: Protein transport protein Sec61 subunit beta; n=31; Eukaryota|Rep: Protein transport protein Sec61 subunit beta - Homo sapiens (Human) Length = 96 Score = 62.5 bits (145), Expect = 1e-08 Identities = 33/69 (47%), Positives = 40/69 (57%) Frame = -2 Query: 461 SPSATSVGSGSRSPTKASAGPRTASGXXXXXXXXXXXXXXXXXXXXXAGSGGMWRFYTDD 282 +PS T+VGS RSP+KA A A+G AG+GGMWRFYT+D Sbjct: 5 TPSGTNVGSSGRSPSKAVAA--RAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTED 62 Query: 281 SPGVKVGPV 255 SPG+KVGPV Sbjct: 63 SPGLKVGPV 71 Score = 52.4 bits (120), Expect = 1e-05 Identities = 24/28 (85%), Positives = 25/28 (89%) Frame = -1 Query: 264 GASSVLVMSLLFIASVFMLHIWGKYTRA 181 G VLVMSLLFIASVFMLHIWGKYTR+ Sbjct: 69 GPVPVLVMSLLFIASVFMLHIWGKYTRS 96 >UniRef50_Q5BSB6 Cluster: SJCHGC05179 protein; n=3; Bilateria|Rep: SJCHGC05179 protein - Schistosoma japonicum (Blood fluke) Length = 88 Score = 46.0 bits (104), Expect = 0.001 Identities = 20/28 (71%), Positives = 22/28 (78%) Frame = -1 Query: 264 GASSVLVMSLLFIASVFMLHIWGKYTRA 181 G VLVMSL FI SVF+LH WGKYTR+ Sbjct: 60 GPVPVLVMSLCFIVSVFLLHFWGKYTRS 87 >UniRef50_Q9WUG7 Cluster: ARL-6 interacting protein-3; n=1; Mus musculus|Rep: ARL-6 interacting protein-3 - Mus musculus (Mouse) Length = 88 Score = 45.6 bits (103), Expect = 0.001 Identities = 27/67 (40%), Positives = 34/67 (50%) Frame = -2 Query: 455 SATSVGSGSRSPTKASAGPRTASGXXXXXXXXXXXXXXXXXXXXXAGSGGMWRFYTDDSP 276 S +VGS RSP S G + A G AG+GGMWRFY ++SP Sbjct: 6 SGDNVGSSGRSPG-TSVGAQ-AVGSTVRQKRDASCGTESAGRTTSAGTGGMWRFYVENSP 63 Query: 275 GVKVGPV 255 G++VGPV Sbjct: 64 GLRVGPV 70 >UniRef50_A4RRJ9 Cluster: Predicted protein; n=1; Ostreococcus lucimarinus CCE9901|Rep: Predicted protein - Ostreococcus lucimarinus CCE9901 Length = 76 Score = 37.5 bits (83), Expect = 0.39 Identities = 14/22 (63%), Positives = 19/22 (86%) Frame = -2 Query: 317 GSGGMWRFYTDDSPGVKVGPVL 252 GSG + RFYTD+SPG+K+ PV+ Sbjct: 25 GSGSLLRFYTDESPGLKITPVV 46 >UniRef50_Q17Q79 Cluster: Sec61beta; n=2; Apansporoblastina|Rep: Sec61beta - Encephalitozoon cuniculi GB-M1 Length = 87 Score = 35.5 bits (78), Expect = 1.6 Identities = 19/36 (52%), Positives = 24/36 (66%) Frame = -1 Query: 300 EVLYR*FSWSQSGASSVLVMSLLFIASVFMLHIWGK 193 E+LY S Q VLV+SL+FIA+VF+LHI K Sbjct: 23 ELLYNQPSRLQISPMQVLVISLIFIANVFLLHILAK 58 >UniRef50_A6R5C2 Cluster: Predicted protein; n=4; Ascomycota|Rep: Predicted protein - Ajellomyces capsulatus NAm1 Length = 285 Score = 34.7 bits (76), Expect = 2.8 Identities = 31/82 (37%), Positives = 37/82 (45%), Gaps = 10/82 (12%) Frame = -2 Query: 467 PQSPSATSVG-SGSR-----SPTKASAGPRTASGXXXXXXXXXXXXXXXXXXXXXAGSGG 306 P+S S S G SGS SPT GPRTA AG+GG Sbjct: 179 PKSASGASSGISGSALHRPSSPTPPG-GPRTAMRRRAAADHKESIRNARPASTRSAGAGG 237 Query: 305 ----MWRFYTDDSPGVKVGPVL 252 M + YTD+SPG+KV PV+ Sbjct: 238 SSGTMLKLYTDESPGLKVDPVV 259 >UniRef50_Q8DMB1 Cluster: Tll0210 protein; n=1; Synechococcus elongatus|Rep: Tll0210 protein - Synechococcus elongatus (Thermosynechococcus elongatus) Length = 268 Score = 33.1 bits (72), Expect = 8.4 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = -1 Query: 282 FSWSQSGASSVLVMSLLFIASVFMLHIWGK 193 F W + GA+S + M LL++ + +L +WG+ Sbjct: 30 FFWGEGGAASFVNMGLLYLIFMLLLRVWGQ 59 >UniRef50_Q01G20 Cluster: Protein transport protein subunit-like; n=1; Ostreococcus tauri|Rep: Protein transport protein subunit-like - Ostreococcus tauri Length = 91 Score = 33.1 bits (72), Expect = 8.4 Identities = 12/20 (60%), Positives = 17/20 (85%) Frame = -2 Query: 311 GGMWRFYTDDSPGVKVGPVL 252 G M RFY+D+SPG+K+ PV+ Sbjct: 44 GSMLRFYSDESPGLKITPVV 63 >UniRef50_Q1WAB9 Cluster: Sec61 beta subunit; n=1; Antonospora locustae|Rep: Sec61 beta subunit - Antonospora locustae (Nosema locustae) Length = 88 Score = 33.1 bits (72), Expect = 8.4 Identities = 12/21 (57%), Positives = 20/21 (95%) Frame = -1 Query: 252 VLVMSLLFIASVFMLHIWGKY 190 VL++SLLFIA+VF+LH++ ++ Sbjct: 39 VLIISLLFIANVFLLHLYARF 59 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 586,998,458 Number of Sequences: 1657284 Number of extensions: 9825997 Number of successful extensions: 18741 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 18131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 18737 length of database: 575,637,011 effective HSP length: 99 effective length of database: 411,565,895 effective search space used: 69143070360 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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