Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30463
(846 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7409| Best HMM Match : DUF963 (HMM E-Value=1.6) 50 2e-06
SB_37359| Best HMM Match : RVT_1 (HMM E-Value=3.5e-18) 40 0.003
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 38 0.010
SB_13289| Best HMM Match : DUF543 (HMM E-Value=10) 36 0.031
SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.055
SB_52598| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.095
SB_9510| Best HMM Match : Keratin_B2 (HMM E-Value=3.8e-05) 35 0.095
SB_29777| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_47409| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-17) 33 0.29
SB_33717| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_6511| Best HMM Match : GLTT (HMM E-Value=1.6e-25) 32 0.51
SB_2695| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.67
SB_21858| Best HMM Match : DUF983 (HMM E-Value=1.5) 31 0.89
SB_59511| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_23144| Best HMM Match : Biotin_lipoyl (HMM E-Value=9.8) 31 1.6
SB_28739| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_1564| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_28318| Best HMM Match : GLTT (HMM E-Value=6.9e-26) 30 2.1
SB_26106| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.53) 30 2.1
SB_32511| Best HMM Match : DUF885 (HMM E-Value=8.6e-15) 30 2.1
SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_44281| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_13459| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_9571| Best HMM Match : Plasmodium_HRP (HMM E-Value=6.2) 30 2.7
SB_18199| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11) 29 3.6
SB_18962| Best HMM Match : Ribosomal_L19e (HMM E-Value=3.7) 29 3.6
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_27420| Best HMM Match : PHB_acc (HMM E-Value=6.6) 29 4.7
SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_35861| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_30777| Best HMM Match : SH2 (HMM E-Value=4e-10) 29 4.7
SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_19841| Best HMM Match : Myb_DNA-binding (HMM E-Value=1.1) 29 4.7
SB_40046| Best HMM Match : TMS_TDE (HMM E-Value=5.5e-07) 29 6.3
SB_27662| Best HMM Match : Pentapeptide_2 (HMM E-Value=6.4) 29 6.3
SB_25045| Best HMM Match : DUF638 (HMM E-Value=3.2) 29 6.3
SB_2014| Best HMM Match : MAM (HMM E-Value=0) 29 6.3
SB_51497| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_26819| Best HMM Match : L27 (HMM E-Value=9.5) 29 6.3
SB_24595| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_8045| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_25949| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_7409| Best HMM Match : DUF963 (HMM E-Value=1.6)
Length = 183
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/80 (40%), Positives = 45/80 (56%)
Frame = -3
Query: 619 FEIRRQNNTASVRQPLATVISM*QPPATVIKM*HPLAPSSRYDSRWQPSSAWDNCWQPSS 440
F+ R + + P +T+I+ QP +T+I +P PSS + +QPSS N +QPSS
Sbjct: 72 FKGRTDIASRKLESPSSTIINPYQPSSTII---NPYQPSSTIINPYQPSSTIINPYQPSS 128
Query: 439 AWDNRWQPSSTCDNI*QPLS 380
N +QPSST N QP S
Sbjct: 129 IIINPYQPSSTIINPYQPSS 148
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = -3
Query: 580 QPLATVISM*QPPATVIKM*HPLAPSSRYDSRWQPSSAWDNCWQPSSAWDNRWQPSSTCD 401
QP +T+I+ QP +T+I +P PSS + +QPSS N +QPSS N +QPSST
Sbjct: 95 QPSSTIINPYQPSSTII---NPYQPSSTIINPYQPSSIIINPYQPSSTIINPYQPSSTII 151
Query: 400 NI*QPLS 380
QP S
Sbjct: 152 YPYQPSS 158
Score = 44.8 bits (101), Expect = 9e-05
Identities = 29/66 (43%), Positives = 39/66 (59%)
Frame = -3
Query: 580 QPLATVISM*QPPATVIKM*HPLAPSSRYDSRWQPSSAWDNCWQPSSAWDNRWQPSSTCD 401
QP +T+I+ QP +T+I +P PSS + +QPSS N +QPSS +QPSST
Sbjct: 105 QPSSTIINPYQPSSTII---NPYQPSSIIINPYQPSSTIINPYQPSSTIIYPYQPSSTII 161
Query: 400 NI*QPL 383
QPL
Sbjct: 162 YPYQPL 167
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = -2
Query: 515 AGTVIKI*QPLATVISMGQLLATVISMGQPLATVINM*QHLTAALRP 375
+ T+I QP +T+I+ Q +T+I+ QP +T+IN Q + + P
Sbjct: 87 SSTIINPYQPSSTIINPYQPSSTIINPYQPSSTIINPYQPSSIIINP 133
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = -2
Query: 581 TTAGNRHQHVTTAGNGHQDVTSAGTVIKI*QPLATVISMGQLLATVISMGQPLATVINM* 402
+T N +Q +T N +Q + T+I QP +T+I+ Q + +I+ QP +T+IN
Sbjct: 88 STIINPYQPSSTIINPYQP---SSTIINPYQPSSTIINPYQPSSIIINPYQPSSTIINPY 144
Query: 401 QHLTAALRP 375
Q + + P
Sbjct: 145 QPSSTIIYP 153
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -2
Query: 545 AGNGHQDVTSAGTVIKI*QPLATVISMGQLLATVISMGQPLATVINM*QHLTAALRP 375
A G D+ S K+ P +T+I+ Q +T+I+ QP +T+IN Q + + P
Sbjct: 71 AFKGRTDIASR----KLESPSSTIINPYQPSSTIINPYQPSSTIINPYQPSSTIINP 123
>SB_37359| Best HMM Match : RVT_1 (HMM E-Value=3.5e-18)
Length = 435
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/75 (29%), Positives = 24/75 (32%)
Frame = +3
Query: 357 DVHTRARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGASGCHILMT 536
D H GC L GC L GC L GC + GCH +
Sbjct: 301 DCHDLPLTTMGCHDLPLTTMGCHDLPLTTMGCHDLPLTTMGCHITQWQSITTMGCHDFLL 360
Query: 537 VAGGCHMLMTVASGC 581
GCH L GC
Sbjct: 361 STMGCHDLPLTTMGC 375
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 37.9 bits (84), Expect = 0.010
Identities = 28/84 (33%), Positives = 37/84 (44%)
Frame = -1
Query: 621 DSRFVDRTTLPLSDNRWQPSSACDNRRQRSSRCDIRWHRHQDMTAAGNRHQHGTTAGNRH 442
DSR V R TL D+R D+R R + D R R + + + RH T +RH
Sbjct: 518 DSRHVRRNTL---DSRHVRRKTLDSRHVRRNTLDSRHVRRKTLDS---RHVRRKTLDSRH 571
Query: 441 QHGTTAGNRHQHVTTFDSRSPAVP 370
T +RH T DSR +P
Sbjct: 572 VRRKTLDSRHVRRKTLDSRHALLP 595
Score = 35.1 bits (77), Expect = 0.072
Identities = 28/84 (33%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Frame = -1
Query: 621 DSRFVDRTTLPLSDNRWQPSSACDNRRQRSS-----RCDIRWHRHQDMTAAGNRHQHGTT 457
DSR V R TL D+R + D+R R RC RH +RH T
Sbjct: 460 DSRNVRRNTL---DSRHVRRNTLDSRHVRPKKLRHVRCKTLDSRHVRRNTLDSRHVRRKT 516
Query: 456 AGNRHQHGTTAGNRHQHVTTFDSR 385
+RH T +RH T DSR
Sbjct: 517 LDSRHVRRNTLDSRHVRRKTLDSR 540
Score = 34.7 bits (76), Expect = 0.095
Identities = 26/79 (32%), Positives = 32/79 (40%)
Frame = -1
Query: 621 DSRFVDRTTLPLSDNRWQPSSACDNRRQRSSRCDIRWHRHQDMTAAGNRHQHGTTAGNRH 442
DSR V R TL D+R D R + D RH + +RH T +RH
Sbjct: 204 DSRHVRRKTL---DSRHVRRKTLDPRHVKRKTLD---SRHVRRKPSDSRHVRRKTLDSRH 257
Query: 441 QHGTTAGNRHQHVTTFDSR 385
T +RH T DSR
Sbjct: 258 VRRNTLDSRHVRCNTLDSR 276
Score = 34.7 bits (76), Expect = 0.095
Identities = 28/84 (33%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Frame = -1
Query: 621 DSRFVDRTTLPLSDNRWQPSSACDNRRQRSS-----RCDIRWHRHQDMTAAGNRHQHGTT 457
DSR V R TL D+R + D+R R RC RH +RH T
Sbjct: 254 DSRHVRRNTL---DSRHVRCNTLDSRHVRPKKLRHVRCKTLDSRHAIRKTLDSRHVRRKT 310
Query: 456 AGNRHQHGTTAGNRHQHVTTFDSR 385
+RH T +RH T DSR
Sbjct: 311 LDSRHVRRKTLDSRHVKRKTLDSR 334
Score = 34.3 bits (75), Expect = 0.13
Identities = 26/79 (32%), Positives = 33/79 (41%)
Frame = -1
Query: 621 DSRFVDRTTLPLSDNRWQPSSACDNRRQRSSRCDIRWHRHQDMTAAGNRHQHGTTAGNRH 442
DSR V R TL D+R D+R R + D RH +RH T +RH
Sbjct: 400 DSRHVRRKTL---DSRHVKRKTLDSRHVRRNTLD---SRHVKRKTLDSRHVRRNTLDSRH 453
Query: 441 QHGTTAGNRHQHVTTFDSR 385
T +R+ T DSR
Sbjct: 454 VRRKTLDSRNVRRNTLDSR 472
Score = 33.9 bits (74), Expect = 0.17
Identities = 28/84 (33%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Frame = -1
Query: 621 DSRFVDRTTLPLSDNRWQPSSACDNRRQRSS-----RCDIRWHRHQDMTAAGNRHQHGTT 457
DSR V R TL D+R + D+R R RC RH +RH T
Sbjct: 352 DSRNVRRNTL---DSRHVRRNTLDSRHVRPKKLRPVRCKTLDSRHVRRKPLDSRHVRRKT 408
Query: 456 AGNRHQHGTTAGNRHQHVTTFDSR 385
+RH T +RH T DSR
Sbjct: 409 LDSRHVKRKTLDSRHVRRNTLDSR 432
Score = 33.1 bits (72), Expect = 0.29
Identities = 25/79 (31%), Positives = 33/79 (41%)
Frame = -1
Query: 621 DSRFVDRTTLPLSDNRWQPSSACDNRRQRSSRCDIRWHRHQDMTAAGNRHQHGTTAGNRH 442
DSR V R TL D+R + D+R + D RH +RH T +R+
Sbjct: 410 DSRHVKRKTL---DSRHVRRNTLDSRHVKRKTLD---SRHVRRNTLDSRHVRRKTLDSRN 463
Query: 441 QHGTTAGNRHQHVTTFDSR 385
T +RH T DSR
Sbjct: 464 VRRNTLDSRHVRRNTLDSR 482
Score = 32.3 bits (70), Expect = 0.51
Identities = 25/80 (31%), Positives = 32/80 (40%)
Frame = -1
Query: 621 DSRFVDRTTLPLSDNRWQPSSACDNRRQRSSRCDIRWHRHQDMTAAGNRHQHGTTAGNRH 442
DSR V R L D+R D+R + D RH +RH T +RH
Sbjct: 390 DSRHVRRKPL---DSRHVRRKTLDSRHVKRKTLD---SRHVRRNTLDSRHVKRKTLDSRH 443
Query: 441 QHGTTAGNRHQHVTTFDSRS 382
T +RH T DSR+
Sbjct: 444 VRRNTLDSRHVRRKTLDSRN 463
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/81 (30%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Frame = -1
Query: 621 DSRFVDRTTLPLSDNRWQPSS--ACDNRRQRSSRCDIRWHRHQDMTAAGNRHQHGTTAGN 448
DSR V R TL R + C R R + RH +RH T +
Sbjct: 470 DSRHVRRNTLDSRHVRPKKLRHVRCKTLDSRHVRRNTLDSRHVRRKTLDSRHVRRNTLDS 529
Query: 447 RHQHGTTAGNRHQHVTTFDSR 385
RH T +RH T DSR
Sbjct: 530 RHVRRKTLDSRHVRRNTLDSR 550
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/79 (30%), Positives = 33/79 (41%)
Frame = -1
Query: 621 DSRFVDRTTLPLSDNRWQPSSACDNRRQRSSRCDIRWHRHQDMTAAGNRHQHGTTAGNRH 442
DSR V R TL D+R D+R + D R R + + + H T +R+
Sbjct: 302 DSRHVRRKTL---DSRHVRRKTLDSRHVKRKTLDSRHVRRKPLDSG---HVRRKTLDSRN 355
Query: 441 QHGTTAGNRHQHVTTFDSR 385
T +RH T DSR
Sbjct: 356 VRRNTLDSRHVRRNTLDSR 374
Score = 29.5 bits (63), Expect = 3.6
Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 5/87 (5%)
Frame = -1
Query: 630 ISKDSRFVDRTTLPLSDNRWQPSSACDNRRQRSS-----RCDIRWHRHQDMTAAGNRHQH 466
I+ R V R TL D+R D+R+ R RC RH +RH
Sbjct: 143 INSKMRHVIRKTL---DSRHVRRKTLDSRQVRPKKLRHVRCKTLDSRHAIRKTLDSRHVR 199
Query: 465 GTTAGNRHQHGTTAGNRHQHVTTFDSR 385
T +RH T +RH T D R
Sbjct: 200 RKTLDSRHVRRKTLDSRHVRRKTLDPR 226
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/70 (32%), Positives = 29/70 (41%)
Frame = -1
Query: 621 DSRFVDRTTLPLSDNRWQPSSACDNRRQRSSRCDIRWHRHQDMTAAGNRHQHGTTAGNRH 442
DSR V R TL D R D+R R D R R + + + RH T +RH
Sbjct: 214 DSRHVRRKTL---DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDS---RHVRRNTLDSRH 267
Query: 441 QHGTTAGNRH 412
T +RH
Sbjct: 268 VRCNTLDSRH 277
>SB_13289| Best HMM Match : DUF543 (HMM E-Value=10)
Length = 319
Score = 36.3 bits (80), Expect = 0.031
Identities = 25/99 (25%), Positives = 42/99 (42%)
Frame = -1
Query: 705 IFINLIYLHIKVISV*KLMYVYIAVISKDSRFVDRTTLPLSDNRWQPSSACDNRRQRSSR 526
+ IN Y +I + ++ ++I+ S ++ + + N SS ++ Q SS
Sbjct: 204 LIINHYYQSSSIIIIIIIINHQSSIINHQSSIINHQSSIIIINHHHQSSIINH--QSSSS 261
Query: 525 CDIRWHRHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQ 409
I + HQ + N HQ + N HQ T N HQ
Sbjct: 262 SSIIINHHQSSSIIINHHQSSSIINNHHQSSTIIINHHQ 300
>SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 35.5 bits (78), Expect = 0.055
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = -1
Query: 552 DNRRQRSSRCDIRWH-RHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQHVTTFDSRSP 379
D ++R D H H T + H H TT + H H TT + + H TT + P
Sbjct: 497 DTHTHETTRHDTHLHDMHTHETTRHDTHLHDTTENDTHPHDTTGNDTYLHDTTENDTHP 555
Score = 31.9 bits (69), Expect = 0.67
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 516 RWHRHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQHVTT 397
R H T + H H TT + + H TT + H H TT
Sbjct: 520 RHDTHLHDTTENDTHPHDTTGNDTYLHDTTENDTHPHDTT 559
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -1
Query: 504 HQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQHVTTFDSRSP 379
H T + + H TT + H H TT + H TT + P
Sbjct: 534 HPHDTTGNDTYLHDTTENDTHPHDTTGNDTQLHDTTGNKTRP 575
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = -1
Query: 504 HQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQHVTTFDSRSP 379
H T + H TT H TT + H H TT + P
Sbjct: 554 HPHDTTGNDTQLHDTTGNKTRPHDTTGNDTHLHDTTGNDTRP 595
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/69 (24%), Positives = 24/69 (34%)
Frame = -1
Query: 585 SDNRWQPSSACDNRRQRSSRCDIRWHRHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQH 406
++N P N Q + H T + H H TT + H TT + H
Sbjct: 549 TENDTHPHDTTGNDTQLHDTTGNKTRPHD--TTGNDTHLHDTTGNDTRPHDTTENDTQPH 606
Query: 405 VTTFDSRSP 379
TT + P
Sbjct: 607 DTTENDTHP 615
>SB_52598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 34.7 bits (76), Expect = 0.095
Identities = 25/58 (43%), Positives = 31/58 (53%)
Frame = -3
Query: 580 QPLATVISM*QPPATVIKM*HPLAPSSRYDSRWQPSSAWDNCWQPSSAWDNRWQPSST 407
QP +T+IS QP +T+I +P PSS + PSSA N PSS PSST
Sbjct: 4 QPTSTIISHHQPSSTII---NPHPPSSTIINPHLPSSAIINPHPPSSTIITPHLPSST 58
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -2
Query: 491 QPLATVISMGQLLATVISMGQPLATVINM*QHLTAALRPCP 369
QP +T+IS Q +T+I+ P +T+IN +A + P P
Sbjct: 4 QPTSTIISHHQPSSTIINPHPPSSTIINPHLPSSAIINPHP 44
>SB_9510| Best HMM Match : Keratin_B2 (HMM E-Value=3.8e-05)
Length = 500
Score = 34.7 bits (76), Expect = 0.095
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +3
Query: 381 ESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGA--SGCHILMTVAGGCH 554
++GC+ + D GC+ D GC+ D GC+ D G +GC GC
Sbjct: 393 DAGCKDAACKDAGCKDAGCKDAGCKDAGCKDAGCKDAGCKDAGCKDAGCKDAACKDAGCK 452
Query: 555 MLMTVASGCRTEA 593
+GC+ A
Sbjct: 453 DAGCKDAGCKDAA 465
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +3
Query: 381 ESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGA--SGCHILMTVAGGCH 554
++GC+ D GC+ D GC+ D GC+ + D G +GC GC
Sbjct: 363 DAGCKDAGCKDAGCKDAGCKDAGCKDAGCKDAGCKDAACKDAGCKDAGCKDAGCKDAGCK 422
Query: 555 MLMTVASGCR 584
+GC+
Sbjct: 423 DAGCKDAGCK 432
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +3
Query: 381 ESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGA--SGCHILMTVAGGCH 554
++GC+ D GC+ + D GC+ D GC+ + D G +GC GC
Sbjct: 428 DAGCKDAGCKDAGCKDAACKDAGCKDAGCKDAGCKDAACKDAGCKDAGCKDAGCKDAGCK 487
Query: 555 MLMTVASGC 581
+GC
Sbjct: 488 DAGCKDAGC 496
Score = 31.5 bits (68), Expect = 0.89
Identities = 19/71 (26%), Positives = 29/71 (40%)
Frame = +3
Query: 381 ESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGASGCHILMTVAGGCHML 560
++GC+ D GC+ D GC+ + D GC+ D +GC GC
Sbjct: 333 DAGCKDAGCKDAGCKDAGCKDAGCKDAACKDAGCKDAGCKD---AGCKDAGCKDAGCKDA 389
Query: 561 MTVASGCRTEA 593
+GC+ A
Sbjct: 390 GCKDAGCKDAA 400
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Frame = +3
Query: 384 SGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGA--SGCHILMTVAGGCHM 557
+ C+ D GC+ D GC+ D GC+ + D G +GC GC
Sbjct: 324 AACKDAGCKDAGCKDAGCKDAGCKDAGCKDAGCKDAACKDAGCKDAGCKDAGCKDAGCKD 383
Query: 558 LMTVASGCR 584
+GC+
Sbjct: 384 AGCKDAGCK 392
>SB_29777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 582 DNRWQPSSACDNRRQRSSRCDIRWHRH-QDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQH 406
D W + D R ++R D H Q TA + QH TT + +H TT +H
Sbjct: 109 DTTWHSKTQHDTARHSTARHDTARHNMAQQDTARHSTTQHSTTQHSTTRHSTTQHGTARH 168
Query: 405 VTT 397
TT
Sbjct: 169 STT 171
>SB_47409| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-17)
Length = 1571
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = -1
Query: 492 TAAGNRHQHGTTAGNRHQHGTTAGNRHQHVTTFDSRSPAVPVCGRHVTNL 343
T GN ++ T R QH T GN + T ++ + V +H T +
Sbjct: 16 TPRGNMQRYAATCNARQQHATPRGNMQRQAATCNAHAATCSVTRQHATQV 65
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/48 (27%), Positives = 17/48 (35%)
Frame = -1
Query: 471 QHGTTAGNRHQHGTTAGNRHQHVTTFDSRSPAVPVCGRHVTNLLPT*Q 328
+H T GN ++ T R QH T + C H T Q
Sbjct: 13 RHATPRGNMQRYAATCNARQQHATPRGNMQRQAATCNAHAATCSVTRQ 60
>SB_33717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 483 GNRHQHGTTAGNRHQHGTTAGNRHQHVTTFDSRSPAVPV 367
G+ H HG +G+ H H TT G H H + S S V +
Sbjct: 138 GHGHSHGGMSGHGHSH-TTRGQSHSHTSPGKSPSSVVTI 175
>SB_6511| Best HMM Match : GLTT (HMM E-Value=1.6e-25)
Length = 334
Score = 32.3 bits (70), Expect = 0.51
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = +3
Query: 357 DVHTRARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGASGCHILMT 536
D H GC+ L C+ L C L GC L GCH L
Sbjct: 252 DCHDSPLTTMGCRDLPLTTMDCRDLPLTTMDCHDLPLTTMGCHDLPLT---TMGCHDLPL 308
Query: 537 VAGGCHMLMTVASGCR 584
GCH L CR
Sbjct: 309 TTMGCHDLPLTTMDCR 324
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/75 (28%), Positives = 22/75 (29%)
Frame = +3
Query: 357 DVHTRARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGASGCHILMT 536
D H GC+ L C L C L C L GCH L
Sbjct: 102 DCHDSPLTTMGCRDLPLTTMDCHDLPLTTMDCHDLPLTTMDCHDLPLT---TMGCHDLPL 158
Query: 537 VAGGCHMLMTVASGC 581
GCH L GC
Sbjct: 159 TTMGCHDLPLTTMGC 173
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/75 (28%), Positives = 22/75 (29%)
Frame = +3
Query: 357 DVHTRARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGASGCHILMT 536
D H GC L GC L GC L C+ L GCH L
Sbjct: 142 DCHDLPLTTMGCHDLPLTTMGCHDLPLTTMGCHDLPLTTMDCRDLPLT---TMGCHDLPL 198
Query: 537 VAGGCHMLMTVASGC 581
CH L C
Sbjct: 199 TTMDCHDLPLTTMDC 213
>SB_2695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 31.9 bits (69), Expect = 0.67
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +3
Query: 411 DDGCQRLSHADDGCQQLSHADDGCQRLSYL--DDGASGC 521
DDGC DDGC D GC ++ D GC
Sbjct: 100 DDGCGNSDEDDDGCGDSDEVDYGCGGSDFINNDSSCDGC 138
>SB_21858| Best HMM Match : DUF983 (HMM E-Value=1.5)
Length = 238
Score = 31.5 bits (68), Expect = 0.89
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +3
Query: 411 DDGCQRLSHADDGC--QQLSHADDGCQRLSYLDDGASGC 521
DDGC DDGC DDGC DD GC
Sbjct: 7 DDGCGDSDEDDDGCGDSDEDDDDDGCGNSDEDDDDDDGC 45
>SB_59511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -1
Query: 528 RCDIRW----HRHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQ 409
+CD RW +RH++ +RH+ +RH+ +RH+
Sbjct: 4 KCDFRWGINTYRHKEHVRGRDRHKENVRGQDRHKEHVRGRDRHK 47
>SB_23144| Best HMM Match : Biotin_lipoyl (HMM E-Value=9.8)
Length = 929
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 402 SHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGASG 518
S DD C S DD C +S DD C S DD ++G
Sbjct: 364 SDSDDVCDVASDGDDVCDGVSGGDDVCNGASDGDDVSNG 402
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 390 CQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGASG 518
C + S DD C +S DD C S DD S DD + G
Sbjct: 370 CDVASDGDDVCDGVSGGDDVCNGASDGDDVSNGASNGDDVSDG 412
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 408 VDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGASG 518
+DD S +DD C S DD C +S DD +G
Sbjct: 356 IDDVSNGASDSDDVCDVASDGDDVCDGVSGGDDVCNG 392
>SB_28739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -1
Query: 525 CDIRWHRHQDMTAAGNR--HQHGTTAGNRHQHGTTAGNRHQHVT 400
C I H H T R + HGT RH HGT RH+H T
Sbjct: 135 CTITVHEHGTRTTHDKRPLYDHGTRT--RHHHGTR--TRHEHCT 174
>SB_1564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 414 DGCQRLSHADDGCQQLSHADDGCQRLSYLDD--GASGCHI 527
D C++ + D C ++H L Y+D+ AS CH+
Sbjct: 439 DECEKKCYLTDNCWSINHGPSSSGDLVYIDECTNASACHV 478
>SB_28318| Best HMM Match : GLTT (HMM E-Value=6.9e-26)
Length = 422
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +3
Query: 390 CQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGASGCHILMTVAGGCHMLMTV 569
C+ L C L GC L GC L GCH L CH L
Sbjct: 233 CRDLPLTTMDCHDLPLTTMGCHDLPLTTMGCHDLPLT---TMGCHDLPLTTMDCHDLPLT 289
Query: 570 ASGCR 584
GCR
Sbjct: 290 TMGCR 294
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/75 (28%), Positives = 22/75 (29%)
Frame = +3
Query: 357 DVHTRARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGASGCHILMT 536
D H GC L GC L GC L C+ L GCH L
Sbjct: 102 DCHDLPLTTMGCHDLPLTTMGCHDLPLTTMGCHDLPLTTMDCRDLPLT---TMGCHDLPL 158
Query: 537 VAGGCHMLMTVASGC 581
CH L C
Sbjct: 159 TTMDCHDLPLTTMDC 173
Score = 28.7 bits (61), Expect = 6.3
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = +3
Query: 357 DVHTRARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGASGCHILMT 536
D H GC L GC L GC L C L GC L
Sbjct: 242 DCHDLPLTTMGCHDLPLTTMGCHDLPLTTMGCHDLPLTTMDCHDLPLT---TMGCRDLPL 298
Query: 537 VAGGCHMLMTVASGC 581
CH L GC
Sbjct: 299 TTMDCHDLPLTTMGC 313
>SB_26106| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.53)
Length = 291
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 516 RWHRHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQHVTT 397
R + Q TA ++ QHGTT + QH TT + Q+ TT
Sbjct: 229 RHNMAQQDTARHSKTQHGTTQHSTTQHSTTQYSTTQYNTT 268
>SB_32511| Best HMM Match : DUF885 (HMM E-Value=8.6e-15)
Length = 510
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -1
Query: 657 KLMYVYIAVISKDSRFVDRTTLPLSDNRWQPSSACDNRRQRSSRCDIRWHRHQD 496
KLM+ I + S D +V T+P +++ C + + + C +RW QD
Sbjct: 139 KLMFKQI-LNSSDMYYVGNRTIPANESDKNAHETCRSDSEAKANCPVRWAIMQD 191
>SB_702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = -1
Query: 585 SDNRWQPSSACDNRRQRSSRCDIRWHRHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQH 406
SDN+ P S+ +R+RSS D+R HR + G + + T ++H G RH H
Sbjct: 1219 SDNK-NPLSS---QRRRSS--DMRAHRR----SRGGKVERRRTLNSKHNEDV--GTRHPH 1266
Query: 405 VTTFDSRSPAVPVCGRH 355
+T F +R P H
Sbjct: 1267 ITDFLARKVRSPKTAYH 1283
>SB_44281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 516 RWHRHQDMTAAGNRHQHGTTAGNRHQHGTTAG-NRHQHVTT 397
++H+H ++ + + + T+ H+H TT H+H+TT
Sbjct: 138 QYHKHTNIVSRTHHYNITNTSLQHHEHITTTSRTHHEHITT 178
>SB_13459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 29.9 bits (64), Expect = 2.7
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 3/115 (2%)
Frame = -1
Query: 735 FFFL*RIHYFIFINLI---YLHIKVISV*KLMYVYIAVISKDSRFVDRTTLPLSDNRWQP 565
FFF + F + N+ Y HI+ I+ + IA S + R +P + N +
Sbjct: 155 FFFPLLVISFCYSNITRAAYRHIRNIAALVPAPLEIAPSSAERHIKVRKEIPAAAND-RK 213
Query: 564 SSACDNRRQRSSRCDIRWHRHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQHVT 400
+ A D QR ++ Q+ T + HQ G ++ HG N HQ T
Sbjct: 214 AEAVD---QRETQIPAALCASQENTQTEDSHQKGKSSNGAIPHGNEKTNDHQDET 265
>SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = +3
Query: 393 QMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGASGCHILMTVAGGCHMLMTVA 572
+ LSH +L H +QLSH ++LS+ S C CH +
Sbjct: 84 EQLSHNTPCKDKLLHNTPCKEQLSHNTPCKEQLSHNTPCKSSCQTTHHARSSCHTTHSAR 143
Query: 573 SGCRTE 590
S C T+
Sbjct: 144 SSCHTK 149
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/55 (27%), Positives = 20/55 (36%)
Frame = +3
Query: 423 QRLSHADDGCQQLSHADDGCQRLSYLDDGASGCHILMTVAGGCHMLMTVASGCRT 587
++LSH +QLSH S CH + CH + S C T
Sbjct: 104 EQLSHNTPCKEQLSHNTPCKSSCQTTHHARSSCHTTHSARSSCHTKHSTRSSCHT 158
>SB_9571| Best HMM Match : Plasmodium_HRP (HMM E-Value=6.2)
Length = 225
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -1
Query: 516 RWHRHQDMTAAGNRHQHGTTAGNRHQHGTTAG-NRHQHVTT 397
++H+H ++ + + + T+ H+H TT H+H+TT
Sbjct: 71 QYHKHTNIVSRTHHYNITNTSLQHHEHITTTSRTHHEHITT 111
>SB_18199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 507 GASGCHILMTVAGGCHMLMTVASGCRTEAV 596
GA GC + + AGGC + + A GC V
Sbjct: 106 GAGGCGVAVVGAGGCGVAVVGAGGCGVAVV 135
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 507 GASGCHILMTVAGGCHMLMTVASGCRTEAV 596
GA GC + + AGGC + + A GC V
Sbjct: 116 GAGGCGVAVVGAGGCGVAVVGAGGCGVAVV 145
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 507 GASGCHILMTVAGGCHMLMTVASGCRTEAV 596
GA GC + + AGGC + + A GC V
Sbjct: 126 GAGGCGVAVVGAGGCGVAVVGAGGCGVAVV 155
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 507 GASGCHILMTVAGGCHMLMTVASGCRTEAV 596
GA GC + + AGGC + + A GC V
Sbjct: 136 GAGGCGVAVVGAGGCGVAVVGAGGCGVAVV 165
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 507 GASGCHILMTVAGGCHMLMTVASGCRTEAV 596
GA GC + + AGGC + + A GC V
Sbjct: 146 GAGGCGVAVVGAGGCGVAVVGAVGCGVAVV 175
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 507 GASGCHILMTVAGGCHMLMTVASGCRTEAV 596
GA GC + + AGGC + + A GC V
Sbjct: 166 GAVGCGVAVVGAGGCGVAVVGAGGCGVAVV 195
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 507 GASGCHILMTVAGGCHMLMTVASGCRTEAV 596
GA GC + + AGGC + + A GC V
Sbjct: 176 GAGGCGVAVVGAGGCGVAVVGAVGCGVAVV 205
>SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11)
Length = 1012
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/71 (21%), Positives = 28/71 (39%)
Frame = -1
Query: 582 DNRWQPSSACDNRRQRSSRCDIRWHRHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQHV 403
D+ +S CD+ ++S CD +RH + + H + + H + + H
Sbjct: 244 DSDLDQTSPCDSDHDQTSPCDSDLNRHPLTSPCDSDHDQTSPRDSDHDQTSPRDSDHDQT 303
Query: 402 TTFDSRSPAVP 370
+ DS P
Sbjct: 304 SPCDSDHDQTP 314
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/73 (21%), Positives = 28/73 (38%)
Frame = -1
Query: 606 DRTTLPLSDNRWQPSSACDNRRQRSSRCDIRWHRHQDMTAAGNRHQHGTTAGNRHQHGTT 427
DR P D+ +S CD+ ++S CD H + + H + + H +
Sbjct: 319 DRDQTPPCDSDHDQTSPCDSDHDQTSPCD---SDHNQTSPRNSDHDQTSPCDSDHDQTSP 375
Query: 426 AGNRHQHVTTFDS 388
+ H + DS
Sbjct: 376 CDSDHDQTSPCDS 388
>SB_18962| Best HMM Match : Ribosomal_L19e (HMM E-Value=3.7)
Length = 351
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 620 IRDSSTEQHCLCPTTAGNRHQHVTTAGNGHQDVTSAGTV 504
+R S EQ + T + QH TA + QD+T GT+
Sbjct: 5 VRPSDEEQRKVRVQTTNHERQHNVTAVDSAQDITPNGTI 43
>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 382 RAAVKCCHMLMTVASGCPMLMTVASSCPMLMTVASGC 492
R A CC ++ V GCP + V + C ++ V C
Sbjct: 137 RVACPCCVSVLRVRVGCPCWVYVCTGCVSVLRVRVVC 173
>SB_27420| Best HMM Match : PHB_acc (HMM E-Value=6.6)
Length = 291
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 227 RTLSFCTNNNLILKK*YGMIKFLCTNYLKIYLFSTIHNNI 108
+ +SF +N L+ K YG K T + + + +TIH N+
Sbjct: 224 KMVSFIEDNGLLYKAQYGFRKSHSTQHATLDIINTIHRNM 263
>SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 565
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 370 GHGRRAAVKCCHMLMTVASGCPMLMTVASSCPMLMTVASGCH 495
GH + CH T A+ C T A+ C T A+ CH
Sbjct: 407 GHPSKTHANWCHPTKTQANWCHPTKTQANWCHPTKTQANWCH 448
>SB_35861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 507 GASGCHILMTVAGGCHMLMTVASGCRTEAV 596
GA GC + + AGGC + + A GC V
Sbjct: 4 GAGGCGVAVVGAGGCGVAVVGAVGCGVAVV 33
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 507 GASGCHILMTVAGGCHMLMTVASGCRTEAV 596
GA GC + + AGGC + + A GC V
Sbjct: 34 GAVGCGVAVVGAGGCGVAVVGAVGCGVAVV 63
>SB_30777| Best HMM Match : SH2 (HMM E-Value=4e-10)
Length = 265
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 315 SYLAIVTSVRGW*RDVHTRARPESGCQMLSHVDDGCQRLSHADDGCQQLS 464
S+ +V SVR +H R +GC LSH D G + + + ++S
Sbjct: 201 SFDLLVVSVRSQSTTIHVRVMYTNGCFHLSHGDQGYESVVELIESVMEVS 250
>SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2141
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/81 (23%), Positives = 31/81 (38%)
Frame = -1
Query: 642 YIAVISKDSRFVDRTTLPLSDNRWQPSSACDNRRQRSSRCDIRWHRHQDMTAAGNRHQHG 463
Y V S+ + D + PL+ W + W H+ +T H+H
Sbjct: 374 YCEVDSQTPHYCDLDSQPLTIVTWTHKHLTIVTWTHKHLTIVAW-THKHLTIVTWTHKHL 432
Query: 462 TTAGNRHQHGTTAGNRHQHVT 400
T+ H+H T H+H+T
Sbjct: 433 TSGTWTHKHLTIVTRTHKHLT 453
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 519 IRWHRHQDMTAAGNRHQHGTTAGNRHQHGTTAGNRHQHVT 400
+ W H+ +T+ H+H T H+H T H+H+T
Sbjct: 425 VTW-THKHLTSGTWTHKHLTIVTRTHKHLTIVTRTHKHLT 463
>SB_19841| Best HMM Match : Myb_DNA-binding (HMM E-Value=1.1)
Length = 753
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 9/75 (12%)
Frame = -1
Query: 594 LPLSDNRWQPSSACDNRRQRSSRCDIRWH--------RHQDMTAAGNRHQHGTTAGNRHQ 439
LP S R+ S C R+ ++ +I W ++ A G QH T G Q
Sbjct: 282 LPRSLTRYARSFDCGERKWLTNGAEISWKMPGRYLTGKYDQHNATGRYDQHNAT-GRYDQ 340
Query: 438 HGTTA-GNRHQHVTT 397
H TA G QH T
Sbjct: 341 HNATATGKYDQHNAT 355
>SB_40046| Best HMM Match : TMS_TDE (HMM E-Value=5.5e-07)
Length = 383
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/72 (26%), Positives = 28/72 (38%)
Frame = +3
Query: 357 DVHTRARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGASGCHILMT 536
D H + L V D +L D QQL D +L + D + H L+
Sbjct: 265 DSHQLVQVSDDSHQLVQVSDDSHQLVQVSDDSQQLVQVSDDSHQLVQVSDDS---HQLVQ 321
Query: 537 VAGGCHMLMTVA 572
V+ H L+ V+
Sbjct: 322 VSDDSHQLVQVS 333
>SB_27662| Best HMM Match : Pentapeptide_2 (HMM E-Value=6.4)
Length = 241
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 372 ARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGASG 518
A+ + G + DDG + DDG + DDG + DDG SG
Sbjct: 188 AKGDDGGGSVDKGDDGGGSVDKGDDGGGSVDKGDDGGGSVDKGDDGDSG 236
>SB_25045| Best HMM Match : DUF638 (HMM E-Value=3.2)
Length = 432
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 438 ADDGCQQLSHADDGCQRLSYLDDGASGCHI 527
ADDG H DDG ++DD CH+
Sbjct: 160 ADDGHVDGGHVDDGHVDDGHVDDDVDDCHV 189
>SB_2014| Best HMM Match : MAM (HMM E-Value=0)
Length = 2282
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/55 (41%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Frame = -1
Query: 543 RQRSSRCDI---RWHRHQDMTAAGNRHQHG-TTAGNRHQHG---TTAGNRHQHVT 400
R R +RC I W RH T R QHG TA R +HG T RH H T
Sbjct: 1379 RPRKNRCTIVFTTWSRHGYNTTT-TRSQHGHDTAAVRSRHGHNTFTTRLRHGHNT 1432
>SB_51497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 510 HRHQDMTAAG-NRHQHGTTAGNRHQHG-TTAGNRHQHVT 400
H H T ++HQH +HQH TA ++H HVT
Sbjct: 104 HGHSSSTVTSRSQHQHDHVTA-KHQHDYVTAQHQHDHVT 141
>SB_26819| Best HMM Match : L27 (HMM E-Value=9.5)
Length = 168
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = -3
Query: 484 WQPSSAWDNCWQPSSAWDNRWQPSSTCDNI*QPLSGRARVWTS 356
W+ S + N W+ S + N W+ S + N+ + +W S
Sbjct: 65 WRSSESMVNLWRSSESMVNLWRSSESMVNLRRASESMVNLWRS 107
>SB_24595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 396 MLSHVDDGCQRLSHADDGCQQL-SHADDG 479
M+ H DDGC + DDG + + H DDG
Sbjct: 62 MVIHDDDGCGDANDVDDGYKMMVIHDDDG 90
>SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1276
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 388 AVKCCHMLMTVASGCPMLMTVASSCPMLMTVASGCHILMTV 510
A+ CC +L +A C L+++A SC L+ A C++++++
Sbjct: 1133 AMPCCPLLC-LAVPCYALLSLAMSCCPLLCRAVPCYVVLSL 1172
>SB_8045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 28.3 bits (60), Expect = 8.3
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Frame = -1
Query: 543 RQRSSRCDIRWHRHQDMTAAGNRHQHGTTAGNR-----HQ--HGTTAGNRHQHVTTFDSR 385
R R S+ +++ +D+ + HGTT G+ H HGTT +R + + S
Sbjct: 14 RSRESQRSLKYQSRKDVLTRDHTGPHGTTRGHTGTTRDHTGPHGTTGDHRRRLL----SC 69
Query: 384 SPAVPVCGRHVTNLLPT*QLQDNFVP 307
V H T L T + FVP
Sbjct: 70 RQITKVNSPHCTPLKSTRTMSSEFVP 95
>SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 677
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 390 CQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSY-LDDGASGCHI 527
C + H D C L H D C L H D C L + LD +S C++
Sbjct: 352 CVIFLHTLDRCVILLHTLDRCVILLHPLDRCVILLHPLDKLSSSCNL 398
>SB_25949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +3
Query: 381 ESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGASG 518
+ G +DDG DDG DDG DDG G
Sbjct: 298 DDGTDSHDDIDDGTDSHDDIDDGTDSHDDIDDGTDDHDDTDDGTDG 343
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,178,112
Number of Sequences: 59808
Number of extensions: 587447
Number of successful extensions: 2484
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2295
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2395401800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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