Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30463
         (846 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    28   0.31 
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    27   0.54 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   2.2  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   2.2  
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        25   2.9  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   2.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   6.7  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 28.3 bits (60), Expect = 0.31
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = -1

Query: 480 NRHQHGTTAGNRHQHGTTAGNRHQHVTTFDSRSPAVPV 367
           + H HG   G     G + GN H H+       P+ P+
Sbjct: 126 HHHHHGNNGGGNGGGGGSGGNAHDHLADGLHSIPSPPI 163


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 27.5 bits (58), Expect = 0.54
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 480 NRHQHGTTAGNRHQHGTTAGNRHQHVTTFDSRSPA 376
           N  ++GTT GN   H TT     +H TT  S  P+
Sbjct: 159 NATRYGTTGGNATHHRTTGVFVTRHSTTGSSVRPS 193



 Score = 23.4 bits (48), Expect = 8.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 459 TAGNRHQHGTTAGNRHQHVTT 397
           T  N  ++GTT GN   H TT
Sbjct: 156 TGVNATRYGTTGGNATHHRTT 176


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 75   CERVGRFRRNHNIIMYC 125
            CERVG F +   I+ YC
Sbjct: 1238 CERVGSFTKLKRIVAYC 1254


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -2

Query: 629 SVRIRDSSTEQHCLCPTTAGNRHQHVTTAGNGHQDVTSA 513
           S RIRDS  E+  L   ++ N + +  ++GN + +  S+
Sbjct: 179 SERIRDSRDERDSLPNASSNNSNNNNNSSGNNNNNTISS 217


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +1

Query: 373 HGRR-AAVKCCHMLMTVAS 426
           HGRR AAV CC   +T+A+
Sbjct: 5   HGRRWAAVLCCVFALTIAA 23


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 706 YIYQSHLFTH*GNKRIKVDVCIYSS 632
           Y Y+ H  TH G K  + + C Y+S
Sbjct: 340 YSYKMHAKTHEGEKCYRCEYCPYAS 364


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 19/62 (30%), Positives = 26/62 (41%)
 Frame = -2

Query: 611  SSTEQHCLCPTTAGNRHQHVTTAGNGHQDVTSAGTVIKI*QPLATVISMGQLLATVISMG 432
            +STE  C+    +GN HQ V       +D T  G         A VI+ G      +S G
Sbjct: 1177 NSTEPVCVKCRKSGNSHQEVPADELMKKDATLGGNATTSTSNEAHVIANGH--DGPVSAG 1234

Query: 431  QP 426
            +P
Sbjct: 1235 KP 1236


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 888,399
Number of Sequences: 2352
Number of extensions: 18505
Number of successful extensions: 63
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)