Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30463
(846 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X92845-1|CAA63430.1| 394|Homo sapiens Drg1 protein. 31 5.3
D87953-1|BAA13505.1| 394|Homo sapiens RTP protein. 31 5.3
CR456842-1|CAG33123.1| 394|Homo sapiens NDRG1 protein. 31 5.3
BC006260-1|AAH06260.1| 109|Homo sapiens NDRG1 protein protein. 31 5.3
BC003175-1|AAH03175.1| 394|Homo sapiens N-myc downstream regula... 31 5.3
AY277597-1|AAQ18036.1| 394|Homo sapiens transformation-related ... 31 5.3
AK223542-1|BAD97262.1| 394|Homo sapiens N-myc downstream regula... 31 5.3
AK095649-1|BAC04597.1| 323|Homo sapiens protein ( Homo sapiens ... 31 5.3
AF004162-1|AAC13419.1| 394|Homo sapiens nickel-specific inducti... 31 5.3
AB180043-1|BAE46382.1| 102|Homo sapiens keratin associated prot... 31 5.3
BC028353-1|AAH28353.1| 1241|Homo sapiens intraflagellar transpor... 31 6.9
AF302154-1|AAG13415.1| 1241|Homo sapiens SPG protein protein. 31 6.9
AF244931-1|AAG15428.1| 1292|Homo sapiens WDR10p-L protein. 31 6.9
AF244930-1|AAG15427.1| 1242|Homo sapiens WDR10p protein. 31 6.9
>X92845-1|CAA63430.1| 394|Homo sapiens Drg1 protein.
Length = 394
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 369 RARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGA 512
R+R SG + S DG + SH +G + SH +G + S+ +GA
Sbjct: 325 RSRTASGSSVTSL--DGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGA 370
>D87953-1|BAA13505.1| 394|Homo sapiens RTP protein.
Length = 394
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 369 RARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGA 512
R+R SG + S DG + SH +G + SH +G + S+ +GA
Sbjct: 325 RSRTASGSSVTSL--DGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGA 370
>CR456842-1|CAG33123.1| 394|Homo sapiens NDRG1 protein.
Length = 394
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 369 RARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGA 512
R+R SG + S DG + SH +G + SH +G + S+ +GA
Sbjct: 325 RSRTASGSSVTSL--DGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGA 370
>BC006260-1|AAH06260.1| 109|Homo sapiens NDRG1 protein protein.
Length = 109
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 369 RARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGA 512
R+R SG + S DG + SH +G + SH +G + S+ +GA
Sbjct: 40 RSRTASGSSVTSL--DGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGA 85
>BC003175-1|AAH03175.1| 394|Homo sapiens N-myc downstream regulated
gene 1 protein.
Length = 394
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 369 RARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGA 512
R+R SG + S DG + SH +G + SH +G + S+ +GA
Sbjct: 325 RSRTASGSSVTSL--DGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGA 370
>AY277597-1|AAQ18036.1| 394|Homo sapiens transformation-related
protein 14 protein.
Length = 394
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 369 RARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGA 512
R+R SG + S DG + SH +G + SH +G + S+ +GA
Sbjct: 325 RSRTASGSSVTSL--DGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGA 370
>AK223542-1|BAD97262.1| 394|Homo sapiens N-myc downstream regulated
gene 1 variant protein.
Length = 394
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 369 RARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGA 512
R+R SG + S DG + SH +G + SH +G + S+ +GA
Sbjct: 325 RSRTASGSSVTSL--DGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGA 370
>AK095649-1|BAC04597.1| 323|Homo sapiens protein ( Homo sapiens
cDNA FLJ38330 fis, clone FCBBF3025280, highly similar to
NDRG1 PROTEIN. ).
Length = 323
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 369 RARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGA 512
R+R SG + S DG + SH +G + SH +G + S+ +GA
Sbjct: 254 RSRTASGSSVTSL--DGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGA 299
>AF004162-1|AAC13419.1| 394|Homo sapiens nickel-specific induction
protein protein.
Length = 394
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 369 RARPESGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDGA 512
R+R SG + S DG + SH +G + SH +G + S+ +GA
Sbjct: 325 RSRTASGSSVTSL--DGTRSRSHTSEGTRSRSHTSEGTRSRSHTSEGA 370
>AB180043-1|BAE46382.1| 102|Homo sapiens keratin associated protein
protein.
Length = 102
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +3
Query: 384 SGCQMLSHVDDGCQRLSHADDGCQQLSHADDGCQRLSYLDDG 509
S C +HV GCQ S CQ L+ C LSY G
Sbjct: 11 SSCHPQNHVSYGCQSPSFIFCRCQSLNFVSRTCYPLSYFSYG 52
>BC028353-1|AAH28353.1| 1241|Homo sapiens intraflagellar transport
122 homolog (Chlamydomonas) protein.
Length = 1241
Score = 30.7 bits (66), Expect = 6.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 475 SSAWDNCWQPSSAWDNRW 422
S W CW PSS W++ W
Sbjct: 177 SPIWSICWNPSSRWESFW 194
>AF302154-1|AAG13415.1| 1241|Homo sapiens SPG protein protein.
Length = 1241
Score = 30.7 bits (66), Expect = 6.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 475 SSAWDNCWQPSSAWDNRW 422
S W CW PSS W++ W
Sbjct: 177 SPIWSICWNPSSRWESFW 194
>AF244931-1|AAG15428.1| 1292|Homo sapiens WDR10p-L protein.
Length = 1292
Score = 30.7 bits (66), Expect = 6.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 475 SSAWDNCWQPSSAWDNRW 422
S W CW PSS W++ W
Sbjct: 228 SPIWSICWNPSSRWESFW 245
>AF244930-1|AAG15427.1| 1242|Homo sapiens WDR10p protein.
Length = 1242
Score = 30.7 bits (66), Expect = 6.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 475 SSAWDNCWQPSSAWDNRW 422
S W CW PSS W++ W
Sbjct: 177 SPIWSICWNPSSRWESFW 194
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,377,441
Number of Sequences: 237096
Number of extensions: 2580952
Number of successful extensions: 5872
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5830
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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