Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30462
(397 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 156 2e-37
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 144 4e-34
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 140 9e-33
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 132 2e-30
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 128 3e-29
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 113 9e-25
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 110 8e-24
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 109 3e-23
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 104 7e-22
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 103 2e-21
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 100 2e-20
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 97 8e-20
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 92 3e-18
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 89 4e-17
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 85 5e-16
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 77 1e-13
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 73 2e-12
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 66 3e-10
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 55 4e-07
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 55 6e-07
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 50 2e-05
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 45 5e-04
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 39 0.040
UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:... 33 1.5
UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1; Meth... 33 2.0
UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011; ... 33 2.7
UniRef50_A0UDG1 Cluster: Putative uncharacterized protein precur... 32 3.5
UniRef50_A0INB4 Cluster: Transcriptional regulator, LysR family;... 31 6.1
UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finge... 31 8.1
UniRef50_Q73K35 Cluster: GGDEF domain protein; n=1; Treponema de... 31 8.1
UniRef50_Q0DMD4 Cluster: Os03g0816200 protein; n=2; Oryza sativa... 31 8.1
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 156 bits (378), Expect = 2e-37
Identities = 71/93 (76%), Positives = 80/93 (86%)
Frame = +3
Query: 3 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYP 182
MT+KRRN GR+K GRGH + VRCTNCARCVPKDKAIKKFVIRNIVE+AAVRDI++ASVY
Sbjct: 1 MTKKRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYE 60
Query: 183 MFQLPKLYAKLHYCVSCAIHSKVVGTDRRKTEE 281
+ LPKLYAKLHYCVSCAIHSKVV R+ +
Sbjct: 61 GYPLPKLYAKLHYCVSCAIHSKVVRNRSREARK 93
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 144 bits (350), Expect = 4e-34
Identities = 65/90 (72%), Positives = 74/90 (82%)
Frame = +3
Query: 3 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYP 182
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVE+AAVRDI++ SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 183 MFQLPKLYAKLHYCVSCAIHSKVVGTDRRK 272
+ LPKLY KLHYCVSCAIHSKVV R+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSRE 90
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 140 bits (339), Expect = 9e-33
Identities = 63/98 (64%), Positives = 74/98 (75%)
Frame = +3
Query: 3 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYP 182
MT KRRNGGR KH RGHV +RC+NC +C PKDKAIK+F++RNIVE AA+RD+ +ASVY
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 183 MFQLPKLYAKLHYCVSCAIHSKVVGTDRRKTEESVLLP 296
+ LPKLYAK YCVSCAIHS VV R +T V P
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRV-RSRTNRRVRTP 97
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 132 bits (320), Expect = 2e-30
Identities = 58/99 (58%), Positives = 76/99 (76%)
Frame = +3
Query: 3 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYP 182
M +KR + GR K GRGHVK VRC NC++ +PKDKAIK+ IRNIVE+AAVRD+++ASVYP
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 183 MFQLPKLYAKLHYCVSCAIHSKVVGTDRRKTEESVLLPR 299
+ LPK Y KLHYCVSCAIH+++V R+ ++ P+
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQ 99
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 128 bits (310), Expect = 3e-29
Identities = 58/99 (58%), Positives = 72/99 (72%)
Frame = +3
Query: 3 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYP 182
MT KRRN GR+K GRGH + VRC++C RCVPKDKAIK++ I+NIVE+AAVRDI+D S
Sbjct: 1 MTSKRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALT 60
Query: 183 MFQLPKLYAKLHYCVSCAIHSKVVGTDRRKTEESVLLPR 299
++LPK Y KL YCVSC IH +VV R + L P+
Sbjct: 61 KYKLPKTYMKLEYCVSCGIHGRVVRVRSRTDRRNRLPPK 99
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 113 bits (273), Expect = 9e-25
Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Frame = +3
Query: 18 RNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYPMFQLP 197
RN RAK G H++ +RCTN A+ VPKDKAIKKF+IRN+VE+AAVRDI++ASV+ + LP
Sbjct: 1 RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLP 60
Query: 198 K--LYAKLHYCVSCAIHSKVV 254
K LY KL+YCV CAIH KVV
Sbjct: 61 KLYLYVKLNYCVRCAIHGKVV 81
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 110 bits (265), Expect = 8e-24
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +3
Query: 3 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVY 179
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVE+AAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 109 bits (261), Expect = 3e-23
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = +3
Query: 3 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYP 182
M KRRN GR+K RGH + V C NC R VPKDKAI +F I+N+V++++ +D++DA +Y
Sbjct: 1 MPVKRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQ 60
Query: 183 MFQLPKLYAKLHYCVSCAIHSKVV 254
++LPK Y K +YCVSCA+H VV
Sbjct: 61 GYELPKTYQKQYYCVSCAVHRHVV 84
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 104 bits (249), Expect = 7e-22
Identities = 47/86 (54%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYP 182
M KRRN GR K +GH VRCTNC R V KDKAIK+F RN+V++++ RDI + Y
Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYA 60
Query: 183 M--FQLPKLYAKLHYCVSCAIHSKVV 254
F +PK+Y KL YCVSCAIH+++V
Sbjct: 61 QSDFTMPKIYVKLSYCVSCAIHARIV 86
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 103 bits (246), Expect = 2e-21
Identities = 48/74 (64%), Positives = 60/74 (81%)
Frame = +3
Query: 33 AKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYPMFQLPKLYAK 212
AK G GHV+ V C + A C+PKDKAIK F+I+NI+E+AAVRDI+ A+V+ + LP LY K
Sbjct: 12 AKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVK 70
Query: 213 LHYCVSCAIHSKVV 254
LHYCVSCAIHS+VV
Sbjct: 71 LHYCVSCAIHSEVV 84
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 99.5 bits (237), Expect = 2e-20
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 MTRKRRNGGRAK--HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDAS- 173
MT KRRN GR+K H RG VK + C NC R PKDKA+ +FV+R ++++A+ RD+ +AS
Sbjct: 1 MTTKRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASP 60
Query: 174 VY-PMFQLPKLYAKLHYCVSCAIHSKVV 254
VY F +PKLY K +C++CAIHS+ V
Sbjct: 61 VYGANFPMPKLYMKQRFCIACAIHSRTV 88
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 97.5 bits (232), Expect = 8e-20
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYP 182
M KRRN GR++ RGH + V CTNC R V KDKA+K++ +R++V+ ++ RDI +
Sbjct: 79 MPVKRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFE 138
Query: 183 MFQ--LPKLYAKLHYCVSCAIHSKVV 254
+ +PKLY KL YC+SCAIHS+VV
Sbjct: 139 NEKQGIPKLYVKLQYCISCAIHSRVV 164
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 92.3 bits (219), Expect = 3e-18
Identities = 40/97 (41%), Positives = 64/97 (65%)
Frame = +3
Query: 3 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYP 182
MT+KRRN GR+K RG V+ + C + VPKDKAI ++VI+NIV+ +++RD+ D+ +Y
Sbjct: 1 MTKKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYE 60
Query: 183 MFQLPKLYAKLHYCVSCAIHSKVVGTDRRKTEESVLL 293
+ +PKLY K + + AIH+++V + + LL
Sbjct: 61 YYTMPKLYYKNTFSIESAIHNRIVRVRSKADRKKRLL 97
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 88.6 bits (210), Expect = 4e-17
Identities = 35/80 (43%), Positives = 55/80 (68%)
Frame = +3
Query: 15 RRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYPMFQL 194
RRN GR K RG +++C C PKDKAIK+F I++++E A+ D+ A++Y +F++
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 195 PKLYAKLHYCVSCAIHSKVV 254
P++ K +CVSCA H+K+V
Sbjct: 62 PRMGYKSQFCVSCACHAKIV 81
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 85.0 bits (201), Expect = 5e-16
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = +3
Query: 54 VKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYPMFQLPKLYAKLHYCVSC 233
VK V C + VPKDKA+++F++RNIVESAA+RD+ ++ + + LPKLY K++Y +S
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSISA 186
Query: 234 AIHSKVVGTDRRK 272
AIHSKVV R+
Sbjct: 187 AIHSKVVRVRSRE 199
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 77.0 bits (181), Expect = 1e-13
Identities = 34/90 (37%), Positives = 54/90 (60%)
Frame = +3
Query: 3 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYP 182
M +KRRN GR+K+ RGHV + C + VP+DKAIKK ++++ ++D + V P
Sbjct: 1 MVKKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLP 60
Query: 183 MFQLPKLYAKLHYCVSCAIHSKVVGTDRRK 272
++ PKLY+ + Y +S A K + R+K
Sbjct: 61 GYKAPKLYSYVFYSISSAFSQKFIKPGRKK 90
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 72.9 bits (171), Expect = 2e-12
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = +3
Query: 150 VRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVGTDRRKTEESVLLP 296
+RDIN+ASVY FQLPKLYAKLHYCVSCAIHSKVV +R K + + P
Sbjct: 17 LRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVV-RNRSKKDRRIRTP 64
Score = 60.1 bits (139), Expect = 2e-08
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 254 RNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 343
RNRSKKDRRIRTPPK+ FPRDM+RPQ VQR
Sbjct: 52 RNRSKKDRRIRTPPKNTFPRDMARPQNVQR 81
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 65.7 bits (153), Expect = 3e-10
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +3
Query: 45 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYPMFQLPKLYAKL 215
R +V+ + NC + +PKDKA KKFV RNIVE+AAVRDI +A+V LPK Y KL
Sbjct: 34 RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL 90
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 55.2 bits (127), Expect = 4e-07
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +3
Query: 9 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYPMF 188
+KR+N GR K +G V C NC + +P+ KA++ V + + + +++
Sbjct: 7 KKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI--- 63
Query: 189 QLPKLYAKLHYCVSCAIH---SKVVGTDRRKTEESVL 290
+P+ Y YCV+CAI+ KV D RK+++ +L
Sbjct: 64 -VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKPIL 99
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 54.8 bits (126), Expect = 6e-07
Identities = 39/84 (46%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Frame = +3
Query: 9 RKRRNGGRAKHGR--GHVKAVRCT-NCARCVPKDKAIKKFVIRNIVESAAVRDINDASVY 179
R RR+ G+ K GR G + V+ N C+ KDKA KFVI+NIVE+AA+R
Sbjct: 3 RMRRDEGKGKKGRSQGLLWPVKAAANFTGCMTKDKA-NKFVIQNIVEAAAIR-------- 53
Query: 180 PMFQLPKLYAKLHYCVSCAIHSKV 251
Y KLH CVSCAIH KV
Sbjct: 54 -------FYVKLHCCVSCAIHIKV 70
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 50.0 bits (114), Expect = 2e-05
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDI-NDASVY 179
M +KR + GR K +G V+C NC R VP DKAI + + V+ ++ ++
Sbjct: 1 MPKKRESRGRRKGAKGKAGTVQCDNCGRVVPADKAICVTRMYSPVDPQLAEELEKKGAII 60
Query: 180 PMFQLPKLYAKLHYCVSCAIHSKVV 254
+ + K YCVSCA+H +V
Sbjct: 61 MRYPVTKC-----YCVSCAVHYGIV 80
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 45.2 bits (102), Expect = 5e-04
Identities = 24/98 (24%), Positives = 45/98 (45%)
Frame = +3
Query: 3 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYP 182
M +KR+N GR K +G + C NC + +P+ KA++ V + V R++
Sbjct: 1 MPKKRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAI- 59
Query: 183 MFQLPKLYAKLHYCVSCAIHSKVVGTDRRKTEESVLLP 296
+ + YC++CA+ ++ R + E +P
Sbjct: 60 ---ISRYLVTKTYCINCAVFFGIIKV-RSREERKKKIP 93
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 38.7 bits (86), Expect = 0.040
Identities = 26/85 (30%), Positives = 39/85 (45%)
Frame = -3
Query: 257 SDNFAVDGA*HAXXXXXXXXXXXEHWVYRGIVNISDRRRFYDVPNHELFDSLVLWHAPRA 78
S+N +VD A + V RG ISD F DV + D LVLW+
Sbjct: 45 SNNSSVDSARNTVVQLVVGLWKSIFSVDRGFRQISDSSSFNDVSDSHSLDGLVLWNRSGT 104
Query: 77 VCASHSFNVTTSMLGASSITALTSH 3
V S +VT+++L ++ ++L H
Sbjct: 105 VDTSDRLDVTSTLLVSTVGSSLLWH 129
>UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:
NEQ043 - Nanoarchaeum equitans
Length = 84
Score = 33.5 bits (73), Expect = 1.5
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +3
Query: 57 KAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYPMFQLPKLYAKLHYCVSCA 236
K VRC C R +PK+KA + N+ ++++ V +F + K++ C SCA
Sbjct: 11 KTVRCYYCGRILPKEKAYVIYTKPNV-----AGELSENEVIAVFSQKR---KIYVCPSCA 62
Query: 237 IHSKVVGTDRRK 272
H + D RK
Sbjct: 63 RHRGI--KDHRK 72
>UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1;
Methanopyrus kandleri|Rep: Zn-ribbon containing protein
- Methanopyrus kandleri
Length = 87
Score = 33.1 bits (72), Expect = 2.0
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +3
Query: 9 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYPMF 188
RK R+G + RG V C C VP+ KAI I + + ++D V+
Sbjct: 7 RKGRDGWKQSKSRGKPSFVTCECCGGKVPRHKAIPWTQGFRITDPVVRQAVDDRYVHTFS 66
Query: 189 QLPKLYAKLHYCVSCA 236
+ K++YC CA
Sbjct: 67 R------KVYYCPKCA 76
>UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 53.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 32.7 bits (71), Expect = 2.7
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +3
Query: 66 RCTNCARCVPKDKAIKKFVIRNIVESAAVRDINDASVYPMFQLPKLYAK 212
R N ++C+PKDK++ ++V N ++ +RDI +VY + + KL K
Sbjct: 170 RGINESKCIPKDKSLNEYVENNPIK-FTIRDI--VTVYSISDIKKLMMK 215
>UniRef50_A0UDG1 Cluster: Putative uncharacterized protein
precursor; n=1; Burkholderia multivorans ATCC 17616|Rep:
Putative uncharacterized protein precursor -
Burkholderia multivorans ATCC 17616
Length = 143
Score = 32.3 bits (70), Expect = 3.5
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 224 RVMRHPQQSCRNRSKKDRRIRTP--PKSNFPRDMSRPQAVQ 340
R+ RHP+Q+ + +++DRR RTP P N RD S +Q
Sbjct: 55 RIARHPRQARAHAARRDRR-RTPNTPADNADRDCSSLTTIQ 94
>UniRef50_A0INB4 Cluster: Transcriptional regulator, LysR family;
n=1; Serratia proteamaculans 568|Rep: Transcriptional
regulator, LysR family - Serratia proteamaculans 568
Length = 284
Score = 31.5 bits (68), Expect = 6.1
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 202 NLGS-WNIGYTEASLISLTAADSTMFLITNFLIALSFGTHR 83
NLG W IGY+ ASL +LTAA + +T +HR
Sbjct: 202 NLGKRWRIGYSSASLAALTAASAAGLGVTLLPAGCRLPSHR 242
>UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finger
protein 646; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to Zinc finger protein 646 - Monodelphis
domestica
Length = 1709
Score = 31.1 bits (67), Expect = 8.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 12 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKK 116
+RR GR + G G AVRC C +P+ ++++
Sbjct: 1386 RRRRAGRVRRGGGPRVAVRCALCGHSLPRRGSLER 1420
>UniRef50_Q73K35 Cluster: GGDEF domain protein; n=1; Treponema
denticola|Rep: GGDEF domain protein - Treponema
denticola
Length = 1431
Score = 31.1 bits (67), Expect = 8.1
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +3
Query: 102 KAIKKFVIRNIVESAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVGTDRRKTEE 281
K I K + +NI++ + N+ S+ LY +L Y +H K++ R KT++
Sbjct: 278 KYIPKLLEQNIIKKTTKQHANEYSIINKILQKTLYDELDYAYRLEVHKKII--QRIKTKK 335
Query: 282 SV 287
++
Sbjct: 336 TI 337
>UniRef50_Q0DMD4 Cluster: Os03g0816200 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0816200 protein -
Oryza sativa subsp. japonica (Rice)
Length = 61
Score = 31.1 bits (67), Expect = 8.1
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 99 DKAIKKFVIRNIVESAAV 152
DKAI +F++RNIVE AAV
Sbjct: 35 DKAINRFLVRNIVEQAAV 52
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,439,168
Number of Sequences: 1657284
Number of extensions: 6973291
Number of successful extensions: 18807
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 18286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18792
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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