Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30461X
         (547 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.3  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   9.3  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   9.3  

>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 7/30 (23%)
 Frame = +2

Query: 389 TGHIARNCPEGGR-------ESATQTCYNC 457
           +G +  NCP GG+       E+A + C +C
Sbjct: 19  SGCLITNCPRGGKRSKFAISENAVKPCVSC 48


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 220  ESRDTTPPCVHSRAKCPVRLH 158
            E R+  PP VHS    P   H
Sbjct: 1790 EEREEAPPSVHSSTVVPPPQH 1810



 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 323  TGHIAREFAQSPDEPSCYNCN 385
            TGH+A  +    DE   YN N
Sbjct: 1600 TGHVAPLYYHPEDEVVFYNAN 1620


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 256 ALKHFSRCRLKPE 218
           ALK  SRCRL  E
Sbjct: 676 ALKFLSRCRLLSE 688


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +2

Query: 335 AREFAQSPDEPSCYNCNKTGHIARNCPEGGRESAT 439
           A E        SC   N +  ++ NC   GR + T
Sbjct: 227 ALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFT 261


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +2

Query: 335 AREFAQSPDEPSCYNCNKTGHIARNCPEGGRESAT 439
           A E        SC   N +  ++ NC   GR + T
Sbjct: 16  ALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFT 50


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +2

Query: 335 AREFAQSPDEPSCYNCNKTGHIARNCPEGGRESAT 439
           A E        SC   N +  ++ NC   GR + T
Sbjct: 16  ALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFT 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,087
Number of Sequences: 336
Number of extensions: 2919
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)