Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30461X
(547 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 56 1e-08
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 46 2e-05
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 46 2e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 45 3e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 45 3e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 45 3e-05
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 44 7e-05
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 44 7e-05
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 44 7e-05
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 36 0.025
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 36 0.025
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 36 0.025
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 36 0.025
AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical ... 34 0.058
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.10
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 33 0.18
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 33 0.18
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 33 0.18
AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 33 0.18
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 32 0.23
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 32 0.23
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 32 0.23
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 32 0.23
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 31 0.41
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 0.41
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 0.41
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 31 0.54
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 0.72
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical ... 30 1.2
AC024859-26|AAK29977.2| 300|Caenorhabditis elegans Hypothetical... 30 1.2
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 29 1.7
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 29 2.2
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 29 2.9
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 29 2.9
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 29 2.9
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 28 3.8
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 28 3.8
AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in... 28 3.8
AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein... 28 5.0
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 27 6.7
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 27 6.7
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 27 8.8
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 27 8.8
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 27 8.8
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 27 8.8
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 27 8.8
AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical ... 27 8.8
AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical ... 27 8.8
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 56.4 bits (130), Expect = 1e-08
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +2
Query: 191 HAGGRGVAGFRFQSAT*EVLQGNRTGHFARDCKEEADRCYRCNGTGHIAREFAQS--PDE 364
+ GGRG SA E G G +CY C +GHI+RE +S +E
Sbjct: 71 NCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECTESGSAEE 130
Query: 365 PSCYNCNKTGHIARNCP 415
CY C +TGHI+R+CP
Sbjct: 131 KRCYQCQETGHISRDCP 147
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 17/85 (20%)
Frame = +2
Query: 296 ADR-CYRCNGTGHIAREFAQSPDE---------PSCYNCNKTGHIARNCPEGGRESATQ- 442
+DR CY+C GHI+R + +CYNC +TGH +R+CP+GG +
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 443 ------TCYNCNKSGTSPATVPTAQ 499
+CYNC G P+A+
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCPSAR 86
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 30/99 (30%)
Frame = +2
Query: 263 TGHFARDCKEEAD------------RCYRCNGTGHIAREFAQSPDE-------------- 364
TGHF+RDC + CY C G GH +R+ + E
Sbjct: 43 TGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGR 102
Query: 365 ----PSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 469
CYNC ++GHI+R C E G + + CY C ++G
Sbjct: 103 SFGGQKCYNCGRSGHISRECTESG-SAEEKRCYQCQETG 140
Score = 43.6 bits (98), Expect = 9e-05
Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 25/80 (31%)
Frame = +2
Query: 305 CYRCNGTGHIAREFAQSPDEP----------SCYNCNKTGHIARNCP----EG------- 421
CY C TGH +R+ + SCYNC GH +R+CP EG
Sbjct: 37 CYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGG 96
Query: 422 ----GRESATQTCYNCNKSG 469
GR Q CYNC +SG
Sbjct: 97 RGGEGRSFGGQKCYNCGRSG 116
Score = 37.5 bits (83), Expect = 0.006
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 144 SVCYKCNRTGHFARECTQGG 203
S CY C TGHF+R+C +GG
Sbjct: 35 STCYNCQETGHFSRDCPKGG 54
Score = 35.5 bits (78), Expect = 0.025
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGG 203
CY C R+GH +RECT+ G
Sbjct: 109 CYNCGRSGHISRECTESG 126
Score = 31.9 bits (69), Expect = 0.31
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 135 MSSSVCYKCNRTGHFARECTQG 200
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 29.1 bits (62), Expect = 2.2
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 150 CYKCNRTGHFAREC 191
CY+C TGH +R+C
Sbjct: 133 CYQCQETGHISRDC 146
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Frame = +2
Query: 266 GHFARDCKEEA---DRCYRCNGTGHIAREFAQSPDEPS--CYNCNKTGHIARNCP-EGGR 427
GHFA DC + C C GH A + Q P P C NC + GH A++C E R
Sbjct: 602 GHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVR 660
Query: 428 ESATQTCYNCNKSGTSPATVPT 493
T+ C C + G PT
Sbjct: 661 MEPTEPCRRCAEEGHWGYECPT 682
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +2
Query: 257 NRTGHFARDCKEEADRCYRCNGTGHIAREFAQSPDEPS--CYNCNKTGHIARNCPEGGRE 430
N+ G++ D E C+ C GHI++E P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKE-CDKPKVPRFPCRNCEQLGHFASDCDQ--PR 612
Query: 431 SATQTCYNCNKSG 469
C NC G
Sbjct: 613 VPRGPCRNCGIEG 625
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Frame = +2
Query: 266 GHFARDCKEEA---DRCYRCNGTGHIAREFAQSPDEPS--CYNCNKTGHIARNCP-EGGR 427
GHFA DC + C C GH A + Q P P C NC + GH A++C E R
Sbjct: 602 GHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVR 660
Query: 428 ESATQTCYNCNKSGTSPATVPT 493
T+ C C + G PT
Sbjct: 661 MEPTEPCRRCAEEGHWGYECPT 682
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +2
Query: 257 NRTGHFARDCKEEADRCYRCNGTGHIAREFAQSPDEPS--CYNCNKTGHIARNCPEGGRE 430
N+ G++ D E C+ C GHI++E P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKE-CDKPKVPRFPCRNCEQLGHFASDCDQ--PR 612
Query: 431 SATQTCYNCNKSG 469
C NC G
Sbjct: 613 VPRGPCRNCGIEG 625
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 45.2 bits (102), Expect = 3e-05
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGTSPATVP 490
+C+NC + GH + +CPE +E + CYNC + G + P
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCP 298
Score = 45.2 bits (102), Expect = 3e-05
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGTSPATVP 490
+C+NC + GH + +CPE +E + CYNC + G + P
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCP 412
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 254 GNRTGHFARDCKEEADRCYRCNGTGHIAREFAQSPDEPS---CYNCNKTGHIARNCPEGG 424
G +G +D E + C+ C GH + + + E CYNC + GH +R+CPE
Sbjct: 242 GFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Query: 425 RESATQTCYNCNKSG 469
+ + + SG
Sbjct: 302 KPREGRNGFTGGSSG 316
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +2
Query: 254 GNRTGHFARDCKEEADRCYRCNGTGHIAREFAQSPDEPS---CYNCNKTGHIARNCPE 418
G +G +D E + C+ C GH + + + E CYNC + GH +R+CPE
Sbjct: 356 GFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 254 GNRTGHFARDCKEEADRCYRCNGTGHIAREFAQSPDEPSCYNCNKTGHIARNCP 415
GN G F + + +C+ C G GH + E + P C+NC + GH + CP
Sbjct: 439 GNAEG-FGNNEERGPMKCFNCKGEGHRSAECPEPPR--GCFNCGEQGHRSNECP 489
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 371 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 469
C+NC GH + CPE R C+NC + G
Sbjct: 455 CFNCKGEGHRSAECPEPPR-----GCFNCGEQG 482
Score = 27.5 bits (58), Expect = 6.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ 197
VCY C + GH +R+C +
Sbjct: 283 VCYNCQQPGHNSRDCPE 299
Score = 27.5 bits (58), Expect = 6.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ 197
VCY C + GH +R+C +
Sbjct: 397 VCYNCQQPGHNSRDCPE 413
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 266 GHFARDCKEEADRCYRCNGTGHIAREFAQSPDEP 367
GH + +C E C+ C GH + E +P +P
Sbjct: 462 GHRSAECPEPPRGCFNCGEQGHRSNE-CPNPAKP 494
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 45.2 bits (102), Expect = 3e-05
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGTSPATVP 490
+C+NC + GH + +CPE +E + CYNC + G + P
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCP 298
Score = 45.2 bits (102), Expect = 3e-05
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGTSPATVP 490
+C+NC + GH + +CPE +E + CYNC + G + P
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCP 412
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 254 GNRTGHFARDCKEEADRCYRCNGTGHIAREFAQSPDEPS---CYNCNKTGHIARNCPEGG 424
G +G +D E + C+ C GH + + + E CYNC + GH +R+CPE
Sbjct: 242 GFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Query: 425 RESATQTCYNCNKSG 469
+ + + SG
Sbjct: 302 KPREGRNGFTGGSSG 316
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +2
Query: 254 GNRTGHFARDCKEEADRCYRCNGTGHIAREFAQSPDEPS---CYNCNKTGHIARNCPE 418
G +G +D E + C+ C GH + + + E CYNC + GH +R+CPE
Sbjct: 356 GFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 254 GNRTGHFARDCKEEADRCYRCNGTGHIAREFAQSPDEPSCYNCNKTGHIARNCP 415
GN G F + + +C+ C G GH + E + P C+NC + GH + CP
Sbjct: 439 GNAEG-FGNNEERGPMKCFNCKGEGHRSAECPEPPR--GCFNCGEQGHRSNECP 489
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 371 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 469
C+NC GH + CPE R C+NC + G
Sbjct: 455 CFNCKGEGHRSAECPEPPR-----GCFNCGEQG 482
Score = 27.5 bits (58), Expect = 6.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ 197
VCY C + GH +R+C +
Sbjct: 283 VCYNCQQPGHNSRDCPE 299
Score = 27.5 bits (58), Expect = 6.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ 197
VCY C + GH +R+C +
Sbjct: 397 VCYNCQQPGHNSRDCPE 413
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 266 GHFARDCKEEADRCYRCNGTGHIAREFAQSPDEP 367
GH + +C E C+ C GH + E +P +P
Sbjct: 462 GHRSAECPEPPRGCFNCGEQGHRSNE-CPNPAKP 494
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 45.2 bits (102), Expect = 3e-05
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGTSPATVP 490
+C+NC + GH + +CPE +E + CYNC + G + P
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCP 298
Score = 45.2 bits (102), Expect = 3e-05
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGTSPATVP 490
+C+NC + GH + +CPE +E + CYNC + G + P
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCP 412
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 254 GNRTGHFARDCKEEADRCYRCNGTGHIAREFAQSPDEPS---CYNCNKTGHIARNCPEGG 424
G +G +D E + C+ C GH + + + E CYNC + GH +R+CPE
Sbjct: 242 GFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Query: 425 RESATQTCYNCNKSG 469
+ + + SG
Sbjct: 302 KPREGRNGFTGGSSG 316
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +2
Query: 254 GNRTGHFARDCKEEADRCYRCNGTGHIAREFAQSPDEPS---CYNCNKTGHIARNCPE 418
G +G +D E + C+ C GH + + + E CYNC + GH +R+CPE
Sbjct: 356 GFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 254 GNRTGHFARDCKEEADRCYRCNGTGHIAREFAQSPDEPSCYNCNKTGHIARNCP 415
GN G F + + +C+ C G GH + E + P C+NC + GH + CP
Sbjct: 439 GNAEG-FGNNEERGPMKCFNCKGEGHRSAECPEPPR--GCFNCGEQGHRSNECP 489
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 371 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 469
C+NC GH + CPE R C+NC + G
Sbjct: 455 CFNCKGEGHRSAECPEPPR-----GCFNCGEQG 482
Score = 27.5 bits (58), Expect = 6.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ 197
VCY C + GH +R+C +
Sbjct: 283 VCYNCQQPGHNSRDCPE 299
Score = 27.5 bits (58), Expect = 6.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ 197
VCY C + GH +R+C +
Sbjct: 397 VCYNCQQPGHNSRDCPE 413
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 266 GHFARDCKEEADRCYRCNGTGHIAREFAQSPDEP 367
GH + +C E C+ C GH + E +P +P
Sbjct: 462 GHRSAECPEPPRGCFNCGEQGHRSNE-CPNPAKP 494
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 44.0 bits (99), Expect = 7e-05
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 469
+C+NC + GH + +CPE +E + CYNC + G
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPG 192
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 302 RCYRCNGTGHIAREFAQSPDEPSCYNCNKTGHIARNCP 415
+C+ C G GH + E + P C+NC + GH + CP
Sbjct: 243 KCFNCKGEGHRSAECPEPPR--GCFNCGEQGHRSNECP 278
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +2
Query: 290 EEADRCYRCNGTGHIAREFAQSPDEPS---CYNCNKTGHIARNCPE 418
E + C+ C GH + + + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 371 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 469
C+NC GH + CPE R C+NC + G
Sbjct: 244 CFNCKGEGHRSAECPEPPR-----GCFNCGEQG 271
Score = 31.5 bits (68), Expect = 0.41
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ 197
VCY C + GH +RECT+
Sbjct: 184 VCYNCQQPGHTSRECTE 200
Score = 30.3 bits (65), Expect = 0.95
Identities = 29/105 (27%), Positives = 35/105 (33%), Gaps = 18/105 (17%)
Frame = +2
Query: 266 GHFARDC----KEEADR-CYRCNGTGHIAREFAQS--PDEPSCYNCNKTGHIARNCPE-- 418
GH + DC KE R CY C GH +RE + P E N
Sbjct: 167 GHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDG 226
Query: 419 --------GGRESATQTCYNCNKSGTSPATVP-TAQDVLVCGKPG 526
GG E C+NC G A P + CG+ G
Sbjct: 227 FGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 266 GHFARDCKEEADRCYRCNGTGHIAREFAQSPDEP 367
GH + +C E C+ C GH + E +P +P
Sbjct: 251 GHRSAECPEPPRGCFNCGEQGHRSNE-CPNPAKP 283
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 44.0 bits (99), Expect = 7e-05
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 469
+C+NC + GH + +CPE +E + CYNC + G
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPG 192
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 302 RCYRCNGTGHIAREFAQSPDEPSCYNCNKTGHIARNCP 415
+C+ C G GH + E + P C+NC + GH + CP
Sbjct: 243 KCFNCKGEGHRSAECPEPPR--GCFNCGEQGHRSNECP 278
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +2
Query: 290 EEADRCYRCNGTGHIAREFAQSPDEPS---CYNCNKTGHIARNCPE 418
E + C+ C GH + + + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 371 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 469
C+NC GH + CPE R C+NC + G
Sbjct: 244 CFNCKGEGHRSAECPEPPR-----GCFNCGEQG 271
Score = 31.5 bits (68), Expect = 0.41
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ 197
VCY C + GH +RECT+
Sbjct: 184 VCYNCQQPGHTSRECTE 200
Score = 30.3 bits (65), Expect = 0.95
Identities = 29/105 (27%), Positives = 35/105 (33%), Gaps = 18/105 (17%)
Frame = +2
Query: 266 GHFARDC----KEEADR-CYRCNGTGHIAREFAQS--PDEPSCYNCNKTGHIARNCPE-- 418
GH + DC KE R CY C GH +RE + P E N
Sbjct: 167 GHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDG 226
Query: 419 --------GGRESATQTCYNCNKSGTSPATVP-TAQDVLVCGKPG 526
GG E C+NC G A P + CG+ G
Sbjct: 227 FGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 266 GHFARDCKEEADRCYRCNGTGHIAREFAQSPDEP 367
GH + +C E C+ C GH + E +P +P
Sbjct: 251 GHRSAECPEPPRGCFNCGEQGHRSNE-CPNPAKP 283
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 44.0 bits (99), Expect = 7e-05
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 469
+C+NC + GH + +CPE +E + CYNC + G
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPG 192
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 302 RCYRCNGTGHIAREFAQSPDEPSCYNCNKTGHIARNCP 415
+C+ C G GH + E + P C+NC + GH + CP
Sbjct: 243 KCFNCKGEGHRSAECPEPPR--GCFNCGEQGHRSNECP 278
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +2
Query: 290 EEADRCYRCNGTGHIAREFAQSPDEPS---CYNCNKTGHIARNCPE 418
E + C+ C GH + + + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 371 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 469
C+NC GH + CPE R C+NC + G
Sbjct: 244 CFNCKGEGHRSAECPEPPR-----GCFNCGEQG 271
Score = 31.5 bits (68), Expect = 0.41
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ 197
VCY C + GH +RECT+
Sbjct: 184 VCYNCQQPGHTSRECTE 200
Score = 30.3 bits (65), Expect = 0.95
Identities = 29/105 (27%), Positives = 35/105 (33%), Gaps = 18/105 (17%)
Frame = +2
Query: 266 GHFARDC----KEEADR-CYRCNGTGHIAREFAQS--PDEPSCYNCNKTGHIARNCPE-- 418
GH + DC KE R CY C GH +RE + P E N
Sbjct: 167 GHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDG 226
Query: 419 --------GGRESATQTCYNCNKSGTSPATVP-TAQDVLVCGKPG 526
GG E C+NC G A P + CG+ G
Sbjct: 227 FGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 266 GHFARDCKEEADRCYRCNGTGHIAREFAQSPDEP 367
GH + +C E C+ C GH + E +P +P
Sbjct: 251 GHRSAECPEPPRGCFNCGEQGHRSNE-CPNPAKP 283
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 35.5 bits (78), Expect = 0.025
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 296 ADRCYRCNGTG-HIAREFAQSPDEPSCYNCNKTGHIARNCPE 418
+ +C C +G H+A F +C+ CN+ GHIA NCP+
Sbjct: 653 SQKCDECQQSGWHMASCFKLK--NRACFRCNEMGHIAWNCPK 692
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 35.5 bits (78), Expect = 0.025
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 296 ADRCYRCNGTG-HIAREFAQSPDEPSCYNCNKTGHIARNCPE 418
+ +C C +G H+A F +C+ CN+ GHIA NCP+
Sbjct: 556 SQKCDECQQSGWHMASCFKLK--NRACFRCNEMGHIAWNCPK 595
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 35.5 bits (78), Expect = 0.025
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 296 ADRCYRCNGTG-HIAREFAQSPDEPSCYNCNKTGHIARNCPE 418
+ +C C +G H+A F +C+ CN+ GHIA NCP+
Sbjct: 567 SQKCDECQQSGWHMASCFKLK--NRACFRCNEMGHIAWNCPK 606
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 35.5 bits (78), Expect = 0.025
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEG 421
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.9 bits (69), Expect = 0.31
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 135 MSSSVCYKCNRTGHFARECTQG 200
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
>AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical
protein Y46H3D.6 protein.
Length = 345
Score = 34.3 bits (75), Expect = 0.058
Identities = 26/73 (35%), Positives = 30/73 (41%)
Frame = -3
Query: 533 EMCRACRTLARLVPSGQLREMCRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPG 354
++CR C A V G L CR C ++ R P SS RC SC N R
Sbjct: 8 QICRVCGECADAVHFGALS--CRACAAFFRRKVAAGKPL--SSSRCSGSCKLENQVLR-- 61
Query: 353 SVRTRALCAPCRY 315
LCA CRY
Sbjct: 62 -----RLCAKCRY 69
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 33.5 bits (73), Expect = 0.10
Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Frame = -3
Query: 476 EMCRTCCSYSRSASQT---PAPPRDSSVRCGPSC---CS--CNTTARPGSVRTRALCAPC 321
+ C+ C S + + T A P+ S +C P C C C T A C
Sbjct: 233 QQCQNSCQNSNTQTITIYVQASPQTS--QCVPQCQQQCQQQCQTRTTASQQCAPACSTSC 290
Query: 320 RYICSNGQPLPCNPSQSVLCGC 255
C+ + C P Q+ CGC
Sbjct: 291 NQSCNQPAQMACQPMQNSQCGC 312
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 33.1 bits (72), Expect = 0.13
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Frame = -3
Query: 524 RACRTLARLVPSGQLREMCRTCCSYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA---RP 357
++C+ + PS C++ C S S P + V+C PSC +C + P
Sbjct: 90 QSCQNQCQSAPSVS---QCQSTCQQSCQTSSCYTPTTPAPVQCQPSCMPACEQSCVVQTP 146
Query: 356 GSVRTRALC-APCRYICSNGQPL-PCNPSQSVLC 261
+V+ C C+ C QP+ C P C
Sbjct: 147 AAVQCVPQCQQQCQQQCVQTQPIQQCQPQCQQQC 180
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +2
Query: 248 LQGNRTGHFARDCKEEADRCYRCNGTG-HIAREFAQ-SPDEPSCYNCNKTGHIARNCPEG 421
L+G+R R K + RC+RC H A+ D CY C H++ CPE
Sbjct: 95 LKGSRIHPLGRK-KAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPER 153
Query: 422 GRE 430
R+
Sbjct: 154 RRK 156
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +2
Query: 248 LQGNRTGHFARDCKEEADRCYRCNGTG-HIAREFAQ-SPDEPSCYNCNKTGHIARNCPEG 421
L+G+R R K + RC+RC H A+ D CY C H++ CPE
Sbjct: 126 LKGSRIHPLGRK-KAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPER 184
Query: 422 GRE 430
R+
Sbjct: 185 RRK 187
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +2
Query: 248 LQGNRTGHFARDCKEEADRCYRCNGTG-HIAREFAQ-SPDEPSCYNCNKTGHIARNCPEG 421
L+G+R R K + RC+RC H A+ D CY C H++ CPE
Sbjct: 126 LKGSRIHPLGRK-KAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPER 184
Query: 422 GRE 430
R+
Sbjct: 185 RRK 187
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +2
Query: 248 LQGNRTGHFARDCKEEADRCYRCNGTG-HIAREFAQ-SPDEPSCYNCNKTGHIARNCPEG 421
L+G+R R K + RC+RC H A+ D CY C H++ CPE
Sbjct: 126 LKGSRIHPLGRK-KAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPER 184
Query: 422 GRE 430
R+
Sbjct: 185 RRK 187
>AF039046-14|AAB94214.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 54
protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.18
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = -3
Query: 533 EMCRACRTLARLVPSGQLREMCRTCCS--YSRSASQTPAPPRDSSVRCGPSC-CSCNTTA 363
+ C+A ++A+ P Q ++ C++ C+ Y+ A+ TPAP V+C P C C +T
Sbjct: 91 QQCQAAPSVAQCQP--QCQQQCQSQCAPMYNPPATTTPAP----VVQCQPMCQQQCQSTC 144
Query: 362 RPGSVRTRALCAP-CRYICSNGQPLPCNPSQS 270
+ + C P C+ C+ P +Q+
Sbjct: 145 -VQQQQPASQCQPQCQQQCNVACDAPATSTQA 175
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = -3
Query: 494 PSGQLREMCRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARP 357
P+ Q + C+ CS S A+Q S + + CSC P
Sbjct: 333 PAAQCQSACQDSCSSSCQAAQPATTACQQSPQSPQNSCSCQANYSP 378
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 32.3 bits (70), Expect = 0.23
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Frame = +2
Query: 272 FARDCKE--EADRCYRCN-GTGHIAREFAQSPDEPSCYN--CNKTGHIARNCPEGGR--- 427
+ DC+ E D+C RC G AR + +P C+ H R C GR
Sbjct: 970 YCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLL 1029
Query: 428 -ESATQT--CYNCNKSGTSPATVPTAQDVLVCGKPGTS 532
E T+ C C K AT + D C PG S
Sbjct: 1030 CEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGAS 1067
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 32.3 bits (70), Expect = 0.23
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Frame = +2
Query: 272 FARDCKE--EADRCYRCN-GTGHIAREFAQSPDEPSCYN--CNKTGHIARNCPEGGR--- 427
+ DC+ E D+C RC G AR + +P C+ H R C GR
Sbjct: 970 YCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLL 1029
Query: 428 -ESATQT--CYNCNKSGTSPATVPTAQDVLVCGKPGTS 532
E T+ C C K AT + D C PG S
Sbjct: 1030 CEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGAS 1067
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 32.3 bits (70), Expect = 0.23
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Frame = +2
Query: 272 FARDCKE--EADRCYRCN-GTGHIAREFAQSPDEPSCYN--CNKTGHIARNCPEGGR--- 427
+ DC+ E D+C RC G AR + +P C+ H R C GR
Sbjct: 970 YCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLL 1029
Query: 428 -ESATQT--CYNCNKSGTSPATVPTAQDVLVCGKPGTS 532
E T+ C C K AT + D C PG S
Sbjct: 1030 CEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGAS 1067
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 32.3 bits (70), Expect = 0.23
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Frame = +2
Query: 272 FARDCKE--EADRCYRCN-GTGHIAREFAQSPDEPSCYN--CNKTGHIARNCPEGGR--- 427
+ DC+ E D+C RC G AR + +P C+ H R C GR
Sbjct: 970 YCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLL 1029
Query: 428 -ESATQT--CYNCNKSGTSPATVPTAQDVLVCGKPGTS 532
E T+ C C K AT + D C PG S
Sbjct: 1030 CEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGAS 1067
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical protein
ZC101.2b protein.
Length = 1160
Score = 32.3 bits (70), Expect = 0.23
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Frame = +2
Query: 272 FARDCKE--EADRCYRCN-GTGHIAREFAQSPDEPSCYN--CNKTGHIARNCPEGGR--- 427
+ DC+ E D+C RC G AR + +P C+ H R C GR
Sbjct: 970 YCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLL 1029
Query: 428 -ESATQT--CYNCNKSGTSPATVPTAQDVLVCGKPGTS 532
E T+ C C K AT + D C PG S
Sbjct: 1030 CEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGAS 1067
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 32.3 bits (70), Expect = 0.23
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Frame = +2
Query: 272 FARDCKE--EADRCYRCN-GTGHIAREFAQSPDEPSCYN--CNKTGHIARNCPEGGR--- 427
+ DC+ E D+C RC G AR + +P C+ H R C GR
Sbjct: 970 YCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLL 1029
Query: 428 -ESATQT--CYNCNKSGTSPATVPTAQDVLVCGKPGTS 532
E T+ C C K AT + D C PG S
Sbjct: 1030 CEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGAS 1067
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 32.3 bits (70), Expect = 0.23
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Frame = +2
Query: 272 FARDCKE--EADRCYRCN-GTGHIAREFAQSPDEPSCYN--CNKTGHIARNCPEGGR--- 427
+ DC+ E D+C RC G AR + +P C+ H R C GR
Sbjct: 970 YCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLL 1029
Query: 428 -ESATQT--CYNCNKSGTSPATVPTAQDVLVCGKPGTS 532
E T+ C C K AT + D C PG S
Sbjct: 1030 CEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGAS 1067
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 32.3 bits (70), Expect = 0.23
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Frame = +2
Query: 272 FARDCKE--EADRCYRCN-GTGHIAREFAQSPDEPSCYN--CNKTGHIARNCPEGGR--- 427
+ DC+ E D+C RC G AR + +P C+ H R C GR
Sbjct: 970 YCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLL 1029
Query: 428 -ESATQT--CYNCNKSGTSPATVPTAQDVLVCGKPGTS 532
E T+ C C K AT + D C PG S
Sbjct: 1030 CEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGAS 1067
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 32.3 bits (70), Expect = 0.23
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Frame = +2
Query: 272 FARDCKE--EADRCYRCN-GTGHIAREFAQSPDEPSCYN--CNKTGHIARNCPEGGR--- 427
+ DC+ E D+C RC G AR + +P C+ H R C GR
Sbjct: 970 YCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLL 1029
Query: 428 -ESATQT--CYNCNKSGTSPATVPTAQDVLVCGKPGTS 532
E T+ C C K AT + D C PG S
Sbjct: 1030 CEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGAS 1067
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 32.3 bits (70), Expect = 0.23
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 6/94 (6%)
Frame = -3
Query: 524 RACRTLARLVPSGQLREMCRTCCSYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA---RP 357
++C+ + PS C++ C S S P + V+C PSC +C + P
Sbjct: 90 QSCQNQCQSAPSVS---QCQSTCQQSCQTSSCYTPTTPAPVQCQPSCMPACEQSCVVQTP 146
Query: 356 GSVRTRALC-APCRYICSNGQPL-PCNPSQSVLC 261
V+ C C+ C QP+ C P C
Sbjct: 147 APVQCVPQCQQQCQQQCVQTQPIQQCQPQCQQQC 180
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 32.3 bits (70), Expect = 0.23
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRESATQTCYNC 457
+C++C + GH +CP+ S+ C+ C
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKC 259
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Frame = +2
Query: 266 GHFARDCKEEADR-----CYRCNGTGHIAREFAQSPDE----PSCYNCNKTGHIARNC 412
GH DC + C++C H E + + +C+ C + GHI+R+C
Sbjct: 238 GHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDC 295
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 138 SSSVCYKCNRTGHFARECTQGGV 206
S VC+KC H EC + GV
Sbjct: 252 SDGVCFKCGSMEHSIHECKKKGV 274
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 32.3 bits (70), Expect = 0.23
Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 11/98 (11%)
Frame = +2
Query: 272 FARDCKE--EADRCYRCN-GTGHIAREFAQSPDEPSCYN--CNKTGHIARNCPEGGR--- 427
+ DC+ E D+C RC G AR + +P C+ H R C GR
Sbjct: 969 YCLDCQHNTEGDQCERCKPGFVGDARRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLL 1028
Query: 428 -ESATQT--CYNCNKSGTSPATVPTAQDVLVCGKPGTS 532
E T+ C C K AT + D C PG S
Sbjct: 1029 CEHNTEGTHCERCKKGYYGDATKGSPYDCTPCPCPGAS 1066
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 32.3 bits (70), Expect = 0.23
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 365 PSCYNCNKTGHIARNCPEGGRES 433
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 31.9 bits (69), Expect = 0.31
Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +2
Query: 305 CYRCNGTGHIAREFAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGTS-PA 481
CY+C GH++++ QS N KT H N E G T N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEGQQIDF 371
Query: 482 TVPTAQDV 505
T T D+
Sbjct: 372 TFDTGSDI 379
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVVSRDSGF-NRQRE 242
CYKC GH +++C Q S +SG NR+ E
Sbjct: 313 CYKCKVVGHVSKDCPQS---STNSGVTNRKTE 341
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 31.9 bits (69), Expect = 0.31
Identities = 19/69 (27%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = -3
Query: 458 CSYSRSASQTPAPPRDSSVRCG-PSCCSCNTTARPGSVRTRALCAPCRYICSNGQPLPCN 282
C QT P CG P C C V T C C+ +C+N C
Sbjct: 68 CGSMGMCGQTCCPSAPPPCSCGTPGCMQCVQQTVLVPVTTTTCCKCCQPVCTNA----CT 123
Query: 281 PSQSVLCGC 255
CGC
Sbjct: 124 NGGGCSCGC 132
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.31
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 135 MSSSVCYKCNRTGHFARECTQGGV 206
+S CYKC GH+A C +G +
Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Frame = +2
Query: 266 GHFARDCKEEADRCYRCNGTGHIAREFAQSPDEPS-----CYNCNKTGHIARNCPEGGRE 430
GH A C + R N H + + PD+ + CY C + GH A C +G
Sbjct: 213 GHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANRCHKGALA 271
Query: 431 SATQTCY 451
+ T +
Sbjct: 272 FLSNTAH 278
Score = 27.5 bits (58), Expect = 6.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCP 415
+C+NC++ GH A CP
Sbjct: 205 TCHNCHERGHKATTCP 220
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 31.5 bits (68), Expect = 0.41
Identities = 19/75 (25%), Positives = 29/75 (38%)
Frame = +2
Query: 314 CNGTGHIAREFAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGTSPATVPT 493
C I A +P E C NK + R C G + C+K +PA T
Sbjct: 77 CQSACGIPHVLASNPTEEVCEKWNKCDDVKRQCAAAGGNYYAGANFQCSK--YTPAPTVT 134
Query: 494 AQDVLVCGKPGTSRA 538
+ V+ + TS++
Sbjct: 135 STTVVDTSESSTSQS 149
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.5 bits (68), Expect = 0.41
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +2
Query: 266 GHFARDCKEEADRCYRCNGTGHIAREFAQSPD---EPSCYNCNKTGHIARNC--PEG 421
G F + RC C H + E +P+ + C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.5 bits (68), Expect = 0.41
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +2
Query: 266 GHFARDCKEEADRCYRCNGTGHIAREFAQSPD---EPSCYNCNKTGHIARNC--PEG 421
G F + RC C H + E +P+ + C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 31.1 bits (67), Expect = 0.54
Identities = 9/41 (21%), Positives = 20/41 (48%)
Frame = +2
Query: 353 SPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGTS 475
+P + C+ C++ GH +CP+ + + N + +S
Sbjct: 1351 APTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSS 1391
Score = 27.9 bits (59), Expect = 5.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQ 197
C++C+R GHF C Q
Sbjct: 1357 CHQCHRIGHFVESCPQ 1372
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 0.72
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 11/76 (14%)
Frame = -3
Query: 467 RTCCSYSRSASQTPAPPRDSSVRCGPS-CCSC----NTTARPGSVRTRALCA-PCRY--- 315
RTCC A+ P PP P+ CC T R G C PC Y
Sbjct: 130 RTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCPNGDCGCGRPCCYYQN 189
Query: 314 --ICSNGQPLPCNPSQ 273
C+ GQ C P Q
Sbjct: 190 PTCCNQGQKACCPPEQ 205
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Frame = -3
Query: 464 TCCSYSRSASQTPAPPRDSSVRCGPS-----CCSCNTTARPGSVRTRALCAPCRYICSNG 300
+CC Y A P PP +S CGPS CC P +C
Sbjct: 79 SCCPYVPPAPLPPPPP-PASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLVCCKQ 137
Query: 299 QPLPCNPSQSVLCGCL 252
P+P NP ++ +
Sbjct: 138 APVPENPCCQIVAAAM 153
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -3
Query: 341 RALCAPCRYICSNGQPLPCNPSQSVLCGCLEA 246
R++C C C N P P NP ++ C A
Sbjct: 42 RSVCQECPSCCGNDGPQPFNPVFNIHFNCCGA 73
>AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical
protein H42K12.2 protein.
Length = 233
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -3
Query: 467 RTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRA 336
RTCC SA+ P+ S + C P CNT AR ++R A
Sbjct: 149 RTCCGCVSSAASGPS---SSLILCFPGGRRCNTHARTEALRGTA 189
>AC024859-26|AAK29977.2| 300|Caenorhabditis elegans Hypothetical
protein Y71H2AM.2 protein.
Length = 300
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/73 (27%), Positives = 28/73 (38%)
Frame = -3
Query: 530 MCRACRTLARLVPSGQLREMCRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGS 351
+CR C L G+ ++ C S + PAPP VRC C+C + S
Sbjct: 60 LCRVCDVAVSL--EGRNQQHVVKCHSCDEATPIRPAPPGKKYVRCP---CNCLLICKASS 114
Query: 350 VRTRALCAPCRYI 312
R CR +
Sbjct: 115 TRIACPRNNCRRV 127
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/85 (25%), Positives = 34/85 (40%)
Frame = -3
Query: 500 LVPSGQLREMCRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAPC 321
++PS R +C + SA T + C SC SC+ + + PC
Sbjct: 168 VIPSSS-RNCQNSCQNQCSSACTTMTCRQTCQNTCLGSCNSCSGGGCNSNNSNLVVVTPC 226
Query: 320 RYICSNGQPLPCNPSQSVLCGCLEA 246
C++G C+ S S L C+ A
Sbjct: 227 ERSCNSGCRSTCS-STSTLSVCIPA 250
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 2/83 (2%)
Frame = -3
Query: 545 RRSREMCRACRTLARLVP--SGQLREMCRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCN 372
R S C + + + +P Q + C T + ++Q ++ GPSC SC
Sbjct: 37 RSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSGPSCSSCQ 96
Query: 371 TTARPGSVRTRALCAPCRYICSN 303
+ + R CSN
Sbjct: 97 SACSSACTTPTCIRTCQRNSCSN 119
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Frame = -3
Query: 458 CSYSRSASQTPAPPRDSSVRCGPSCCS-CNTTARPGSVRTRALCAPCRYICSNGQPLPCN 282
C R+ Q+ R P+C S C+ G T CR C G PCN
Sbjct: 466 CPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCG---TPGKNHHCREKCHEGPCPPCN 522
Query: 281 PSQSVLCGC 255
+ SV+C C
Sbjct: 523 LNTSVICRC 531
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 290 EEADRCYRCNGTGHIAREFAQSPDEPSCYNCNKTGH 397
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRESA 436
+C+NC K GH A C RE A
Sbjct: 203 TCFNCKKYGHRATECSAPQRECA 225
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 28.7 bits (61), Expect = 2.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 365 PSCYNCNKTGHIARNCPE 418
P C+ C + GHI+ CP+
Sbjct: 608 PQCFTCGEMGHISTYCPK 625
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 368 SCYNCNKTGHIARNCPEGGRESA 436
+C+NC K GH A C RE A
Sbjct: 203 TCFNCKKYGHRATECSAPQRECA 225
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 28.3 bits (60), Expect = 3.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 371 CYNCNKTGHIARNCPE 418
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/39 (25%), Positives = 15/39 (38%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKATAQ 266
C+ C GH AR C + + G+ Q A+
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSCQAE 614
Score = 27.1 bits (57), Expect = 8.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 371 CYNCNKTGHIARNC 412
C+ C GH+ARNC
Sbjct: 576 CHYCKNVGHMARNC 589
>AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 8 protein.
Length = 445
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = -3
Query: 497 VPSGQLREMCRTCCSYSRSASQTPAPPRDSSVRCGP--SCCSCNTTARP 357
V Q C+T C S S S A P ++ + P S CSC T P
Sbjct: 387 VQQQQPAAQCQTACQSSCSNSCQAAQPATTACQQSPQQSSCSCQTNYSP 435
>AF025458-5|AAB70974.1| 298|Caenorhabditis elegans Squat protein 2
protein.
Length = 298
Score = 27.9 bits (59), Expect = 5.0
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = -3
Query: 476 EMCRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCN--TTARPGSVRTRALC-APCRYICS 306
E TCCS + + P PP D G N T + GS+ A+ PC IC
Sbjct: 99 EPAPTCCSCQQGPAGPPGPPGDDG-NGGQDGVRGNDGTDGKEGSLLESAIVNEPC-IICP 156
Query: 305 NGQPLP 288
G P P
Sbjct: 157 PGPPGP 162
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Frame = +2
Query: 350 QSPDEPSCY----NCNKTGHIARNCPEGGRESATQTCYNCNKSGTSPATVPTAQDVLV 511
Q P P C +C +T + C + + C C + SP P +V++
Sbjct: 228 QQPSAPQCQQCQSSCQQTQQCQQQCIPLCNQPSAPACQQCQSACQSPVVAPQVVNVML 285
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/65 (23%), Positives = 26/65 (40%)
Frame = -3
Query: 518 CRTLARLVPSGQLREMCRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTR 339
C + + Q ++ TC ++ Q AP ++ P C C TT + + +
Sbjct: 162 CAPQCQQASAPQCQQCQNTCQQFAPVCQQQCAP--QCTISSAPQCQQCQTTCQQFAPVCQ 219
Query: 338 ALCAP 324
CAP
Sbjct: 220 QQCAP 224
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 27.1 bits (57), Expect = 8.8
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = -3
Query: 500 LVPSGQLREMCRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRA-LCAP 324
L P + C++ C + +Q APP +C P C S T+ P R A L P
Sbjct: 326 LDPQQRCSSECQSVCQLA-CVTQKSAPPSSCLDKCSPQCDSACTS--PQVQRNSAQLFTP 382
Query: 323 C--RYICSNGQPLPCNPSQSVL 264
+ S+ QP+ N S + L
Sbjct: 383 SADQAPASSAQPIKINISLAPL 404
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -3
Query: 398 CGPSCCSCNTTARPGSVRTRALCAPCRYICSNGQPLP---CNPSQSVLC 261
C P+C S N R R C P ++ Q +P C +QS+ C
Sbjct: 42 CPPTCESPNPQCRVDCTRPSCTCLPGHVYSNSRQCIPANSCYQTQSLRC 90
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Frame = -3
Query: 446 RSASQTPAPPRDSSVRCG-PSCC--SCNTTARPGSVRTRALC----APCRYICS-NGQPL 291
R + T P D +++ +CC C ++ ++ + C + CR + + NG+P+
Sbjct: 285 RKNAVTVVPKADVTMKSHIKACCVIGCEKSSNSKTIMCKTCCRSFHSGCREVETLNGKPI 344
Query: 290 PCNPSQSVLCG 258
P + +S +CG
Sbjct: 345 PDDQCESCVCG 355
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Frame = -3
Query: 446 RSASQTPAPPRDSSVRCG-PSCC--SCNTTARPGSVRTRALC----APCRYICS-NGQPL 291
R + T P D +++ +CC C ++ ++ + C + CR + + NG+P+
Sbjct: 285 RKNAVTVVPKADVTMKSHIKACCVIGCEKSSNSKTIMCKTCCRSFHSGCREVETLNGKPI 344
Query: 290 PCNPSQSVLCG 258
P + +S +CG
Sbjct: 345 PDDQCESCVCG 355
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/74 (22%), Positives = 23/74 (31%)
Frame = -3
Query: 473 MCRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAPCRYICSNGQP 294
+C+ C + + P D P CSC A + +C C NG
Sbjct: 1837 LCKDACPFGSKCTYDITKPMD------PITCSCEQNAAAHNTDCSPICQKQPNWCHNGGR 1890
Query: 293 LPCNPSQSVLCGCL 252
P C CL
Sbjct: 1891 CLDTPGYPGKCKCL 1904
>AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2b protein.
Length = 700
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +2
Query: 281 DCKEEADRCYRCNGTGH-IAREFAQSPDEPSCYNCNKTGHIARNCP 415
D +E C CN H + + PD + C K H+ CP
Sbjct: 249 DVADEMVFCDMCNTCVHMVCAGIEELPDPAEPWKCAKCAHMGTPCP 294
>AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2a protein.
Length = 741
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +2
Query: 281 DCKEEADRCYRCNGTGH-IAREFAQSPDEPSCYNCNKTGHIARNCP 415
D +E C CN H + + PD + C K H+ CP
Sbjct: 290 DVADEMVFCDMCNTCVHMVCAGIEELPDPAEPWKCAKCAHMGTPCP 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,989,543
Number of Sequences: 27780
Number of extensions: 289397
Number of successful extensions: 1323
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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