Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30459
(754 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 132 4e-32
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 131 9e-32
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 111 8e-26
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 91 2e-19
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 77 4e-15
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 34 0.025
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.076
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 31 0.18
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.18
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.31
SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces... 29 0.71
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.71
SPBC3B9.10 |vti1||SNARE Vti1|Schizosaccharomyces pombe|chr 2|||M... 29 0.71
SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription fact... 28 1.6
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 27 2.2
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 2.9
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 2.9
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 2.9
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 27 3.8
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 27 3.8
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 3.8
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 26 5.0
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.0
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 26 5.0
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.0
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 5.0
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 5.0
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 5.0
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 5.0
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 26 5.0
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 5.0
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 26 6.6
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 6.6
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 26 6.6
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 6.6
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 26 6.6
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 8.8
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 25 8.8
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 25 8.8
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 25 8.8
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 25 8.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 132 bits (320), Expect = 4e-32
Identities = 65/84 (77%), Positives = 68/84 (80%)
Frame = +3
Query: 3 VMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAP 182
VMT LIKRN YSDNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAP
Sbjct: 407 VMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAP 466
Query: 183 RGVPQIEVTFDIDANGILNVSAIE 254
RGVPQIEVTFD+DANGILNVSA+E
Sbjct: 467 RGVPQIEVTFDVDANGILNVSALE 490
Score = 105 bits (251), Expect = 9e-24
Identities = 49/93 (52%), Positives = 69/93 (74%)
Frame = +2
Query: 254 ESTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 433
+ T K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++
Sbjct: 491 KGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNS 550
Query: 434 MEDEKLKEKISDSDKQTILDKCNDTSSGWIPTS 532
++D LK+K+ SDK+T+ DK + W+ ++
Sbjct: 551 LDDPNLKDKVDASDKETV-DKAVKETIEWLDSN 582
Score = 53.2 bits (122), Expect = 4e-08
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +1
Query: 490 RQVQRHLKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 612
+ V+ ++WLDSN A K+E+E KQKELE + NPI+ K+YQ
Sbjct: 570 KAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 131 bits (317), Expect = 9e-32
Identities = 64/84 (76%), Positives = 68/84 (80%)
Frame = +3
Query: 3 VMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAP 182
VMT LIKRN Y+DNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAP
Sbjct: 407 VMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAP 466
Query: 183 RGVPQIEVTFDIDANGILNVSAIE 254
RGVPQIEVTFD+DANGILNVSA+E
Sbjct: 467 RGVPQIEVTFDVDANGILNVSALE 490
Score = 104 bits (250), Expect = 1e-23
Identities = 49/90 (54%), Positives = 67/90 (74%)
Frame = +2
Query: 254 ESTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 433
+ T K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++
Sbjct: 491 KGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNS 550
Query: 434 MEDEKLKEKISDSDKQTILDKCNDTSSGWI 523
++D LK+K+ SDK+ I DK + W+
Sbjct: 551 LDDPNLKDKVDASDKEAI-DKAVKETIEWL 579
Score = 55.6 bits (128), Expect = 7e-09
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +1
Query: 490 RQVQRHLKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 612
+ V+ ++WLD N A K+EYE KQKELEG+ NPI+ K+YQ
Sbjct: 570 KAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQ 610
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 111 bits (268), Expect = 8e-26
Identities = 54/84 (64%), Positives = 62/84 (73%)
Frame = +3
Query: 3 VMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAP 182
VMT LI RN DNQ VLIQV+EGER +TKDNNLLGKF+L GIPPAP
Sbjct: 436 VMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAP 495
Query: 183 RGVPQIEVTFDIDANGILNVSAIE 254
RGVPQIEVTF++DANG+L VSA++
Sbjct: 496 RGVPQIEVTFEVDANGVLTVSAVD 519
Score = 87.4 bits (207), Expect = 2e-18
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +2
Query: 251 RESTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 430
+ K K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K
Sbjct: 520 KSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKG 579
Query: 431 TM-EDEKLKEKISDSDKQTILDKCNDTSSGWI 523
+DE+L K+ DKQ +LD D + W+
Sbjct: 580 QFDDDEQLGGKVDPEDKQAVLDAVEDVAE-WL 610
Score = 30.7 bits (66), Expect = 0.23
Identities = 12/34 (35%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +1
Query: 511 KWLDSN-QLADKEEYEHKQKELEGIYNPIITKMY 609
+WL+ + + A KEE+E ++++L+ + +PI K+Y
Sbjct: 608 EWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 91.1 bits (216), Expect = 2e-19
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = +3
Query: 3 VMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAP 182
V T LI RN +D Q V I+VF+GER + +DN L+G F+LTGI PAP
Sbjct: 450 VFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVRDNKLIGNFQLTGIAPAP 509
Query: 183 RGVPQIEVTFDIDANGILNVSA 248
+G PQIEV+FD+DA+GI+NVSA
Sbjct: 510 KGQPQIEVSFDVDADGIINVSA 531
Score = 55.2 bits (127), Expect = 9e-09
Identities = 30/84 (35%), Positives = 47/84 (55%)
Frame = +2
Query: 254 ESTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 433
++TNK++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C ++S
Sbjct: 534 KATNKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESN 592
Query: 434 MEDEKLKEKISDSDKQTILDKCND 505
++ K+K+ + + K D
Sbjct: 593 LDIH--KDKLDQQAVEDLRSKITD 614
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 76.6 bits (180), Expect = 4e-15
Identities = 33/61 (54%), Positives = 45/61 (73%)
Frame = +3
Query: 72 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAI 251
+DNQ V V++GER +N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+
Sbjct: 435 ADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAV 494
Query: 252 E 254
E
Sbjct: 495 E 495
Score = 54.8 bits (126), Expect = 1e-08
Identities = 24/78 (30%), Positives = 46/78 (58%)
Frame = +2
Query: 254 ESTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 433
++T + I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY ++++T
Sbjct: 496 KTTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETT 555
Query: 434 MEDEKLKEKISDSDKQTI 487
+ + + K+ DK I
Sbjct: 556 ISEPNVMMKLKRGDKSKI 573
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 33.9 bits (74), Expect = 0.025
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 233 PQRFRYRESTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALES 409
P + R + K ++++ + RL E +E+ EAE DK ET+ KNALE
Sbjct: 527 PVKMRKVKKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEE 585
Query: 410 YCFSMKSTMED 442
Y + ++ ++D
Sbjct: 586 YIYDTRAKLDD 596
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.076
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = +2
Query: 314 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 493
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 494 K 496
K
Sbjct: 79 K 79
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 31.1 bits (67), Expect = 0.18
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +2
Query: 263 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 442
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 443 EKLKEKISD 469
KLK+K S+
Sbjct: 580 RKLKKKASN 588
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.18
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 296 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 475
+GR + + N+ E + DDKQ + KN+LE+ M+ + E K D +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 476 KQTILDKCND 505
+ LDK D
Sbjct: 1318 EMEDLDKMED 1327
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.31
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +2
Query: 161 DRDPT-GAAWRASN*GHLRHRCQRYPQRFRYRESTN-KENKITITNDKGRLSKEEIERMV 334
+ PT G+ A LR + + Q + + T + + +K + +KEE+E +
Sbjct: 1556 EHSPTQGSLENADEIARLRSQLESTKQYYEKEKETEILAARSELVAEKEK-TKEELENQL 1614
Query: 335 NEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 475
NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1615 NEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFD 1660
Score = 25.8 bits (54), Expect = 6.6
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = +2
Query: 251 RESTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 430
+E TNK ++T N + ++EIE + + + + E I K E +KS
Sbjct: 1437 QELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDAEQI-TKEQFE----QLKS 1491
Query: 431 TMEDEKLKEKISDSDKQ 481
E E+ +++++DS +
Sbjct: 1492 --EKERTEKELADSKNE 1506
>SPBC2F12.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 29.1 bits (62), Expect = 0.71
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = +2
Query: 296 KGRLSKEEIERMVNEAEKYRNEDDKQKET----IQAKNALESYCFSMKSTMEDEKLKEKI 463
K +L EE ++ ++A+K N D++++ I K L + + E++ EK
Sbjct: 248 KNKLDNEEWDKAFSDAKKLSNMKDREEKLYIVPIDPKPILRAQAIPRRIQPEEQADYEK- 306
Query: 464 SDSDKQTILDKCNDTSSGWIPTSWPTRRSMSTSRKN 571
+D I+ SS +IP S PT++ T KN
Sbjct: 307 ELNDHVNIVK-----SSTYIPISIPTQKQKPTLPKN 337
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.71
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 296 KGRLSKEEIERMVNEAEKYRNEDD 367
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC3B9.10 |vti1||SNARE Vti1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 214
Score = 29.1 bits (62), Expect = 0.71
Identities = 24/105 (22%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Frame = +2
Query: 224 QRYPQRFRYRESTNKENKITITNDKGRLSK-EEIERMVNEAEKYRNEDDKQKETIQA--K 394
+ Y Q +R + + E K+ + G S + +R++NE ++ + + + I +
Sbjct: 2 ETYEQEYRLLRA-DIEEKLNDLSKSGENSVIQSCQRLLNEIDEVIGQMEIEITGIPTSER 60
Query: 395 NALESYCFSMKSTMEDEK--LKEKISDSDKQTILDKCNDTSSGWI 523
+ S +ST+E+ + LKE+I SD++ + ++TS +I
Sbjct: 61 GLVNGRIRSYRSTLEEWRRHLKEEIGKSDRKALFGNRDETSGDYI 105
>SPBPB8B6.04c |grt1|SPAPB8B6.04c, SPAPB8B6.04c|transcription factor
Grt1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 648
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 203 GHLRHRCQRYPQRFRYRESTNKENKITITNDKGRLSKEEIERM-VNEAEKYRNEDD 367
G + CQ+Y + YR+ K ++ ND ++ E+M + E RN +D
Sbjct: 27 GDVCFECQKYNENCVYRQFYRKIKRLKYNNDNSKIDNFSNEQMNIPEFISVRNLND 82
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 27.5 bits (58), Expect = 2.2
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 224 QRYPQRFRYRESTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKN 397
++YP ++Y +S + + +K SKE I V E Y + +K K +Q KN
Sbjct: 24 EQYPDAYKYYQSALDYFMMALKYEKNEKSKEIIRSKVIE---YLDRAEKLKVYLQEKN 78
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = +2
Query: 311 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 490
+EE E+ + E K R + DK++E + + LE + + + K+ + + +
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTKEGS 753
Query: 491 DKCNDTS 511
D C +S
Sbjct: 754 DGCTTSS 760
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 2.9
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -1
Query: 244 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 107
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 329 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 433
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 26.6 bits (56), Expect = 3.8
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Frame = +2
Query: 266 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 445
K N D+ + +EE E ++EK ++ K + KNA ++ M DE
Sbjct: 85 KANAFEAFADEQSVEEEEEE----DSEKPVRKNKKSSKKASPKNAFDALADDMDDLSLDE 140
Query: 446 KLKEKISDSDKQTILDKCNDTSS-----GWIPTSWPTRRSMSTSRKN 571
+ E S K+ K D S G I +S ++ S++N
Sbjct: 141 EESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKKSKEN 187
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 3.8
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 4/141 (2%)
Frame = +2
Query: 311 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK--LKEKISDSDKQT 484
+E E AE+ N + ++E Q K A+E + + E E+ + EK+ + ++
Sbjct: 791 REAEEEAARAAEEEANRELHEQEEAQ-KRAIEERTRAAREAKEREQREMAEKL-ERQRRI 848
Query: 485 ILDKCNDTSSGWIPTSWPTRRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRA--SRAE 658
++ + S + R ++ S + A+ R V +SP R SR
Sbjct: 849 QQERDEEISRKLAEKAAARRANIGASSPSPGAWR-RGGASAGGVSRDSPRYSRGGYSRGS 907
Query: 659 HPEPEVPPPGLEALAPPSRRS 721
P E P A PPSRR+
Sbjct: 908 VPPRETLAPSKGAYVPPSRRN 928
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 3.8
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 269 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 439
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 26.2 bits (55), Expect = 5.0
Identities = 16/75 (21%), Positives = 39/75 (52%)
Frame = +2
Query: 251 RESTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 430
+ ST+ + + DK + E+I + ++Y NED+ + +++ A S+ ++ +
Sbjct: 385 KHSTSLPSTEPVEVDKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPAAVSFS-TITN 443
Query: 431 TMEDEKLKEKISDSD 475
T++ + KI +S+
Sbjct: 444 TIQAKYSNRKIKNSN 458
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 5.0
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = +2
Query: 311 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 463
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 464 SDSDKQTILDKCND 505
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 26.2 bits (55), Expect = 5.0
Identities = 19/93 (20%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +2
Query: 314 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 490
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE + +
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKESSATQQNENQH 549
Query: 491 DKCNDTSSGWIPTSWPTRRSMSTSRKNWKAFTI 589
+ + + +++T RK W T+
Sbjct: 550 KRSSRKLLYEDKQAIQEAHTINTKRKLWPQSTL 582
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 5.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 314 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 484
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 5.0
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 290 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 466
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 467 DSDKQT 484
+D+ T
Sbjct: 695 -TDRLT 699
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 5.0
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 278 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 454
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 455 EKISDSDKQTILDKC 499
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.2 bits (55), Expect = 5.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 620 EESPEVCRASRAEHPEPE 673
EE+P AS EHPEP+
Sbjct: 244 EEAPAAAAASENEHPEPK 261
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 28 TLPSPLNRLRHSPPTLITNPEYSSKYLR 111
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 26.2 bits (55), Expect = 5.0
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 19/158 (12%)
Frame = +2
Query: 293 DKGRLSKEEIERMVNEAEKYR-NEDD--------KQKETIQAKNALESYCFSMKSTMED- 442
+ G K+ +R V +EK EDD K +T++A N S K +
Sbjct: 727 ESGSYLKDLPDRNVGNSEKVTFQEDDINSPKLQSKNNQTVEAVNTETSDKLQEKEANHEL 786
Query: 443 ---EKLKEKISDSDKQTILDKCNDTSSGWIPTSWP--TRR-SMSTSRKNWKAFTIR*LRR 604
EK++EK+++ DK ++ D D TS TR S +T K K I + +
Sbjct: 787 ENIEKIEEKLTEVDKVSLSDAFPDQEIKNSRTSVQNGTRSVSKNTPEKETKVDKIDNVSK 846
Query: 605 CTRVPEESPEVCRASRA---EHPEPEVPPPGLEALAPP 709
+ E SP C S A + E EV L ++ P
Sbjct: 847 --KDVETSPGSCETSSAFAKTYAEKEVTSINLPSVRKP 882
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 308 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 430
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 25.8 bits (54), Expect = 6.6
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = -3
Query: 248 SGNVEDTVGIDVEGDLNLRHATRRRWDPGQLEFTEQVVIFGH--STLTLKYLDEYSGLVI 75
+GN +D+ L+ RR+D G + F + + FG + T + Y+
Sbjct: 361 NGNQVKPTKLDLFSSGELKIFMNRRFDQGMVAFLDYLHQFGDFCAAKTPSAVLPYAIEND 420
Query: 74 RVGGECLSL-FSGDGSVT 24
R+GG+C+ L F+ D + T
Sbjct: 421 RIGGKCIRLAFNQDENWT 438
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 296 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 406
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 25.8 bits (54), Expect = 6.6
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 383 IQAKNA-LESYCFSMKS---TMEDEKLKEKISDSDKQTILDKCNDTSSGWIPTSW 535
+QA+ A LESY ++ T+ + K+++++SD KQ + +G T W
Sbjct: 114 LQARKANLESYRAKLEKEYKTLAENKIQQRLSDGTKQLVTIDGLQYITGVSDTKW 168
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 6.6
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +2
Query: 311 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 490
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 491 D 493
D
Sbjct: 451 D 451
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 6.6
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 257 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCF 418
+TNK N + N L EEI V + E + DD+ + E +A ++ E Y F
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 25.4 bits (53), Expect = 8.8
Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 5/95 (5%)
Frame = +2
Query: 464 SDSDKQTILDKCNDTS-----SGWIPTSWPTRRSMSTSRKNWKAFTIR*LRRCTRVPEES 628
S S + + LDK ND S P P + + S+ + T + T P+E
Sbjct: 370 SSSSEPSNLDKINDVKKNIEVSANEPQPRPVKEDVPKSQVGGETDTTDVINNST--PKEE 427
Query: 629 PEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPT 733
E ++ E PP E P S KP+
Sbjct: 428 TEESPSTELPETGKEQPPNKAEPAVPTEASSTKPS 462
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.4 bits (53), Expect = 8.8
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 272 NKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK 448
NK+ + G + + E E EAE ++ ++D+ ++E ++ L S S E+E+
Sbjct: 187 NKVLAARE-GLIDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEE 245
Query: 449 LKEKISDSDK 478
E SD D+
Sbjct: 246 SSESESDEDE 255
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 8.8
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +2
Query: 278 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 457
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 458 KISDSDKQTILDK 496
K S +K DK
Sbjct: 298 KQSKIEKYMKSDK 310
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.4 bits (53), Expect = 8.8
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 251 RESTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 364
+ S K + + K EE+E VNE E++R D
Sbjct: 263 KRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 25.4 bits (53), Expect = 8.8
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 359 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCND 505
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNN 283
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,766,740
Number of Sequences: 5004
Number of extensions: 54078
Number of successful extensions: 285
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 283
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 359287726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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