Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30458
         (769 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical pr...   156   2e-38
Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical pr...    29   4.8  
U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AF100306-10|AAC68926.1|  798|Caenorhabditis elegans Hypothetical...    28   6.4  
Z72503-6|CAA96594.4|  273|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical
           protein T05E11.1 protein.
          Length = 210

 Score =  156 bits (378), Expect = 2e-38
 Identities = 74/90 (82%), Positives = 80/90 (88%)
 Frame = +2

Query: 257 GRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLV 436
           GR+  +RFRKA CPIVERL NSLMMHGRNNGKKLM VRIVKHAFEII+LLTGENP+QVLV
Sbjct: 60  GRFQVRRFRKAACPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLV 119

Query: 437 TAIINSGPREDSTRIGRAGTVRRQPLMFHP 526
            A+INSGPREDSTRIGRAGTVRRQ +   P
Sbjct: 120 NAVINSGPREDSTRIGRAGTVRRQAVDVAP 149



 Score =  133 bits (322), Expect = 1e-31
 Identities = 63/66 (95%), Positives = 66/66 (100%)
 Frame = +1

Query: 511 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELER 690
           VDV+PLRRVNQAIWLLCTGAREAAFRN+KTIAEC+ADELINAAKGSSNSYAIKKKDELER
Sbjct: 145 VDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDELER 204

Query: 691 VAKSNR 708
           VAKSNR
Sbjct: 205 VAKSNR 210



 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 27/42 (64%), Positives = 32/42 (76%)
 Frame = +3

Query: 129 AADIPEIKLYGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHS 254
           A + PE+ L+G+WS   V VSD+SL DYI VKEK AKYLPHS
Sbjct: 17  ATEAPEVALFGKWSLQSVNVSDISLVDYIPVKEKSAKYLPHS 58


>Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical
           protein F34D10.4 protein.
          Length = 692

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 20/68 (29%), Positives = 30/68 (44%)
 Frame = +1

Query: 529 RRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 708
           +RV   +    T    A  RN   + E  A+E I A +   N +A+K +   +  A SNR
Sbjct: 474 QRVQDTVQKARTAVGYAGTRNRSPLREADAEE-IAATEALKNRFAVKSRGTAKAKANSNR 532

Query: 709 *NILLSHL 732
              LL  +
Sbjct: 533 GAALLESI 540


>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical protein
            C25H3.8 protein.
          Length = 2148

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +3

Query: 57   AEENWNDDVAE--AGSVVVETMSLPQAADIPEIKLYGRWSCYDVQVSDMSLQ 206
            A +N++D + E  AG  V    +L    +   +K Y  + C+ ++V DMS+Q
Sbjct: 1697 AGQNYDDQMLELPAGIPVTGRPALKLEMNCTSMKHYDSFDCFRLKVCDMSVQ 1748


>AF100306-10|AAC68926.1|  798|Caenorhabditis elegans Hypothetical
           protein T24C4.7 protein.
          Length = 798

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = +2

Query: 446 INSGPREDSTRIGRAGTVRRQPLMFHPCAESTKQSGFCAQV----HVRLHSEILKQSQSV 613
           I S  + D T +G       + L+F  C  + + S FC ++    H R HS   +  +S 
Sbjct: 562 IESSQKYDLTAMGDIARESSRCLLFRNCLCTNQMSRFCCKLVGREHCRFHSVYPENDESY 621

Query: 614 LQMN 625
            +M+
Sbjct: 622 AKMD 625


>Z72503-6|CAA96594.4|  273|Caenorhabditis elegans Hypothetical
           protein C26C6.8 protein.
          Length = 273

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 536 STKQSGFCAQVHVRLHSEILKQSQSVLQ 619
           S  QSGF    HV++  EIL+Q+  V++
Sbjct: 178 SDNQSGFVPSSHVKIPHEILQQASRVIK 205


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,200,228
Number of Sequences: 27780
Number of extensions: 373145
Number of successful extensions: 993
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)