Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30457
         (770 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50198-2|AAA91260.2|  363|Caenorhabditis elegans Hypothetical pr...    89   2e-18
Z92803-13|CAB07249.2|  331|Caenorhabditis elegans Hypothetical p...    32   0.39 
AL021482-4|CAA16341.2|  331|Caenorhabditis elegans Hypothetical ...    32   0.39 
AF003136-4|AAK93853.2|  368|Caenorhabditis elegans Acyltransfera...    32   0.39 
AC024791-24|AAF60656.1|  627|Caenorhabditis elegans Hypothetical...    30   1.6  
AC024761-6|AAF59467.3|  599|Caenorhabditis elegans Hypothetical ...    30   2.1  
AC024761-5|AAU05550.1|  601|Caenorhabditis elegans Hypothetical ...    30   2.1  
AB096001-1|BAE53417.1|  676|Caenorhabditis elegans bHLH-PAS fact...    29   2.8  
Z68320-1|CAB63328.2|  278|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AL031630-11|CAA21001.1|  334|Caenorhabditis elegans Hypothetical...    29   3.7  
Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical p...    29   4.8  
AL110484-28|CAB54395.2|  419|Caenorhabditis elegans Hypothetical...    29   4.8  
AL032637-15|CAA21616.2|  370|Caenorhabditis elegans Hypothetical...    29   4.8  
AL032640-5|CAA21644.1|  475|Caenorhabditis elegans Hypothetical ...    28   6.4  
AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical ...    28   6.4  
AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical ...    28   6.4  
U61955-7|AAV58862.1|  456|Caenorhabditis elegans Hypothetical pr...    28   8.5  
U61955-6|AAC24408.2|  505|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>U50198-2|AAA91260.2|  363|Caenorhabditis elegans Hypothetical
           protein R04B3.2 protein.
          Length = 363

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 41/71 (57%), Positives = 51/71 (71%)
 Frame = +1

Query: 295 QGASVCEDQQCDGTVGYGGSPDENGETTLDALIMNGRTMNIGAVGGLRRIKHAISVARHV 474
           +G S CE  QCD TVGYGGSPDENGET LD+L+++   M +GAV  L RI+ A  VA  V
Sbjct: 57  EGLSTCEALQCDTTVGYGGSPDENGETCLDSLVIDADGMRVGAVANLHRIRDAARVAWGV 116

Query: 475 LDHTKHSFLVG 507
           ++ TKH+ LVG
Sbjct: 117 MNFTKHTLLVG 127



 Score = 84.6 bits (200), Expect = 7e-17
 Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 8/91 (8%)
 Frame = +3

Query: 513 ATQFAVEMGFQEESLTTSVSKKLWMKWHNEHHCQPNFWLNVSPDPTRNCGPYQKHEYSQH 692
           ATQFA  +GF+EE L+T  +K    KW  E  CQPNFW NVSPDP+ +CGPY+ +  ++ 
Sbjct: 130 ATQFAKTLGFKEEDLSTEETKSWISKWKTEK-CQPNFWKNVSPDPSSSCGPYKTNPLTKS 188

Query: 693 LLKKSHLN--------VDRFNHDTIGMVAID 761
           +   S +N        V++ NHDTIGMV  D
Sbjct: 189 MRYYSLVNQSDEAGYLVEKTNHDTIGMVVRD 219


>Z92803-13|CAB07249.2|  331|Caenorhabditis elegans Hypothetical
           protein K01G5.9 protein.
          Length = 331

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +1

Query: 340 GYGGSPDENGETTLDALIMNGRTMNIGAVGGLRRIKHAISVARHV 474
           G+G     + E   +A  M+ + ++ GAVG +  + H   VARH+
Sbjct: 50  GFGSHLTIDQEVECEASYMSSKNLSFGAVGAISNVFHPSRVARHL 94


>AL021482-4|CAA16341.2|  331|Caenorhabditis elegans Hypothetical
           protein K01G5.9 protein.
          Length = 331

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +1

Query: 340 GYGGSPDENGETTLDALIMNGRTMNIGAVGGLRRIKHAISVARHV 474
           G+G     + E   +A  M+ + ++ GAVG +  + H   VARH+
Sbjct: 50  GFGSHLTIDQEVECEASYMSSKNLSFGAVGAISNVFHPSRVARHL 94


>AF003136-4|AAK93853.2|  368|Caenorhabditis elegans
           Acyltransferase-like protein 11 protein.
          Length = 368

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = +3

Query: 483 HKTFLFSWWLATQFAVEMGFQEESLTTSVSKKLWMKWHNEHHCQPNFWLNVSPDPTRNCG 662
           H   +F W++     + +    E +   V ++L  KW NE    P +WL + P+ TRN  
Sbjct: 133 HLVPMFGWYIFQHGYIYVRRFGEFIGAPVLRQL--KWLNES--DPPYWLLIFPEGTRNSA 188

Query: 663 PYQKH--EYSQHLLKKS 707
             +KH  E S   L+KS
Sbjct: 189 K-KKHLLESSNRFLEKS 204


>AC024791-24|AAF60656.1|  627|Caenorhabditis elegans Hypothetical
           protein Y47G6A.4 protein.
          Length = 627

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +3

Query: 627 LNVSPD-PTRNCGPYQKHEYSQHLLKK 704
           L +SP+ P   C PY+  E+ QHLLK+
Sbjct: 274 LGISPNGPADGCEPYEVFEWLQHLLKQ 300


>AC024761-6|AAF59467.3|  599|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.5a protein.
          Length = 599

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
 Frame = -1

Query: 485 VWSNTCLATDMACLILLKPPTAPIFIVLPFIIRASNVVSPFSSGLPPYPTVPSHCW---S 315
           V++ + +A  M        P  P+F ++P +     V  PF+ G  P   V +  W   S
Sbjct: 261 VFTTSTMAPVMFTFPTTTTPLMPLFPIIPNVHFKQGVGVPFAPGTLPTTKVDASKWNDPS 320

Query: 314 SQTDAPCSTASNAVPPLFR 258
           +   AP ST  +  P  +R
Sbjct: 321 AYATAP-STVDSTTPKTYR 338


>AC024761-5|AAU05550.1|  601|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.5b protein.
          Length = 601

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
 Frame = -1

Query: 485 VWSNTCLATDMACLILLKPPTAPIFIVLPFIIRASNVVSPFSSGLPPYPTVPSHCW---S 315
           V++ + +A  M        P  P+F ++P +     V  PF+ G  P   V +  W   S
Sbjct: 263 VFTTSTMAPVMFTFPTTTTPLMPLFPIIPNVHFKQGVGVPFAPGTLPTTKVDASKWNDPS 322

Query: 314 SQTDAPCSTASNAVPPLFR 258
           +   AP ST  +  P  +R
Sbjct: 323 AYATAP-STVDSTTPKTYR 340


>AB096001-1|BAE53417.1|  676|Caenorhabditis elegans bHLH-PAS factor
           protein.
          Length = 676

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 600 EHHCQPNFWLNVSPDPTRNCGPYQKHEYSQHLLKKSHLN 716
           +H  QPN  L ++P P  +C P   +  S  L    HLN
Sbjct: 614 QHQSQPNHPLQMTPIPPMSCPP-SNYGQSNFLFHHQHLN 651


>Z68320-1|CAB63328.2|  278|Caenorhabditis elegans Hypothetical
           protein W07A12.5 protein.
          Length = 278

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 328 DGTVGYGGSPDENGETTLDALIMNG 402
           DG  GY GSP ++G+  L+ +I +G
Sbjct: 103 DGNDGYPGSPGKSGQDALERMITDG 127


>AL031630-11|CAA21001.1|  334|Caenorhabditis elegans Hypothetical
           protein Y38H6C.12 protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 130 NEPNRNIFNLCISLFNECLFRNKYSHSDYYLVV 228
           N P++N+  L I   N C+   K +H D++L++
Sbjct: 158 NIPDQNLGKLMIMETNPCIPEEKINHPDFFLLI 190


>Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 146 IFLTYVLVYLTNVCSETNIPIVITTWSFTNSTVKAWEF 259
           IF  Y++VY  N   E N+P       F  +TVK++ F
Sbjct: 43  IFPLYIIVYRKNRKREKNLPTFPIVSHFHKATVKSYTF 80


>Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 146 IFLTYVLVYLTNVCSETNIPIVITTWSFTNSTVKAWEF 259
           IF  Y++VY  N   E N+P       F  +TVK++ F
Sbjct: 43  IFPLYIIVYRKNRKREKNLPTFPIVSHFHKATVKSYTF 80


>AL110484-28|CAB54395.2|  419|Caenorhabditis elegans Hypothetical
           protein Y38E10A.4 protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 350 PPYPTVPSHCWSSQTDAPCSTASNAVP 270
           PP P +PS C SS   AP + +S A P
Sbjct: 294 PPTPVIPSMCNSSMIMAPGTISSPAYP 320


>AL032637-15|CAA21616.2|  370|Caenorhabditis elegans Hypothetical
           protein Y43F8C.16 protein.
          Length = 370

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
 Frame = -1

Query: 479 SNTCLATDMACLILLKPPTAPIFIVLPFIIRASNVVSPFSSGLPPYPTVPSHCWSSQTDA 300
           S+T L T          PT+ +  +     R S + S  SS  P   TVPS   S+ T  
Sbjct: 252 SSTSLLTSTLASTTTLIPTSTMSTITLTSDRTSTITSTGSSNPPSTSTVPSTTTSTTTPK 311

Query: 299 PC--STASNAVPPL 264
           P   STA  +  P+
Sbjct: 312 PSSPSTAEASTTPV 325


>AL032640-5|CAA21644.1|  475|Caenorhabditis elegans Hypothetical
           protein Y43F8A.5 protein.
          Length = 475

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
 Frame = -1

Query: 569 YRGSEGFFLKAHFYCKLGG-------KPPTKKECFVWSNTCLATDMACLILLKPPTAPIF 411
           Y G+  FFL AHF   +         KP  +++C      C  TD+  L   KPPT+   
Sbjct: 186 YLGAASFFLVAHFIAFMSAVFMRDPEKPDLQEKCVKRKPFCHGTDL--LKDKKPPTSTNL 243

Query: 410 IVLPFIIRAS 381
            +L F    S
Sbjct: 244 KILYFSFACS 253


>AC024809-9|AAO12399.1|  700|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2b protein.
          Length = 700

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 384 CSXXXXXXXXXXSCGWLEKDQTCHICC 464
           CS          +C W++ ++T H+CC
Sbjct: 353 CSVCDTRQGACVTCSWVDCEETYHVCC 379


>AC024809-8|AAF59546.2|  741|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.2a protein.
          Length = 741

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 384 CSXXXXXXXXXXSCGWLEKDQTCHICC 464
           CS          +C W++ ++T H+CC
Sbjct: 394 CSVCDTRQGACVTCSWVDCEETYHVCC 420


>U61955-7|AAV58862.1|  456|Caenorhabditis elegans Hypothetical
           protein M03D4.4b protein.
          Length = 456

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = -1

Query: 479 SNTCLATDMACLILLKPPTAPIFIVLPFIIRASNVVSPFSSGLPPYPTVPSHCWSSQTD 303
           S++ LATD +C    +  T+P+ ++    +  S+V    SSG  P PT      SS  D
Sbjct: 334 SDSDLATDTSCASSPQK-TSPLQLLESSCLEQSSVSPSSSSGASPQPTASESSTSSCKD 391


>U61955-6|AAC24408.2|  505|Caenorhabditis elegans Hypothetical
           protein M03D4.4a protein.
          Length = 505

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = -1

Query: 479 SNTCLATDMACLILLKPPTAPIFIVLPFIIRASNVVSPFSSGLPPYPTVPSHCWSSQTD 303
           S++ LATD +C    +  T+P+ ++    +  S+V    SSG  P PT      SS  D
Sbjct: 383 SDSDLATDTSCASSPQK-TSPLQLLESSCLEQSSVSPSSSSGASPQPTASESSTSSCKD 440


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,403,479
Number of Sequences: 27780
Number of extensions: 404398
Number of successful extensions: 1049
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)