Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30456
(730 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 139 6e-32
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 120 5e-26
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 116 8e-25
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 115 1e-24
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 109 5e-23
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 109 5e-23
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 103 3e-21
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 98 2e-19
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 98 2e-19
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 97 3e-19
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 96 7e-19
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 93 5e-18
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 93 6e-18
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 89 1e-16
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 89 1e-16
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 89 1e-16
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 89 1e-16
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 82 1e-14
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 80 5e-14
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 75 2e-12
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 71 2e-11
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 71 4e-11
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 68 3e-10
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 64 4e-09
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 60 4e-08
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 60 5e-08
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 57 4e-07
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 57 4e-07
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 56 7e-07
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 53 8e-06
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 53 8e-06
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.020
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 41 0.036
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.3
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 35 1.8
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 2.3
UniRef50_A2DPP4 Cluster: Phosphatidylinositol 3-and 4-kinase fam... 35 2.3
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 35 2.3
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 34 4.1
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 5.4
UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;... 33 5.4
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.4
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 33 5.4
UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;... 33 7.2
UniRef50_UPI0000383042 Cluster: hypothetical protein Magn0300385... 33 7.2
UniRef50_Q0FF01 Cluster: Probable fatty acid desaturase protein;... 33 7.2
UniRef50_A6QTK7 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 7.2
UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,... 33 9.5
UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA... 33 9.5
UniRef50_A0V889 Cluster: AsmA precursor; n=3; Comamonadaceae|Rep... 33 9.5
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza sa... 33 9.5
UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein OJ1031... 33 9.5
UniRef50_Q5VSH5 Cluster: Chromosome 1 open reading frame 122; n=... 33 9.5
UniRef50_P14653 Cluster: Homeobox protein Hox-B1; n=29; Euteleos... 33 9.5
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 139 bits (337), Expect = 6e-32
Identities = 63/73 (86%), Positives = 71/73 (97%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 689
+ E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGKMRNRRR+ RKG
Sbjct: 12 VSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNRRRLHRKG 71
Query: 690 PLIIFNKDQGLTR 728
PLII+NKDQGLTR
Sbjct: 72 PLIIYNKDQGLTR 84
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 120 bits (288), Expect = 5e-26
Identities = 51/52 (98%), Positives = 51/52 (98%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWH 112
Score = 114 bits (274), Expect = 2e-24
Identities = 50/74 (67%), Positives = 64/74 (86%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 686
++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRIQR+
Sbjct: 146 EVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
Query: 687 GPLIIFNKDQGLTR 728
GP II+N+D G+ +
Sbjct: 206 GPCIIYNEDNGIIK 219
Score = 80.6 bits (190), Expect = 4e-14
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +3
Query: 72 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 252 HK 257
H+
Sbjct: 60 HQ 61
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 116 bits (278), Expect = 8e-25
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 113 bits (271), Expect = 6e-24
Identities = 49/73 (67%), Positives = 64/73 (87%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 689
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI R+G
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARRG 209
Query: 690 PLIIFNKDQGLTR 728
PL++++KD+GL +
Sbjct: 210 PLVVYDKDEGLRK 222
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/64 (59%), Positives = 48/64 (75%)
Frame = +3
Query: 66 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 245
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 246 AGHK 257
AGH+
Sbjct: 61 AGHQ 64
Score = 37.5 bits (83), Expect = 0.33
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +1
Query: 442 LGGSVAATGVPALVQARGHIIERFPSFP 525
L ++AA+GVPALVQ++GH+I+ FP
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFP 154
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 115 bits (277), Expect = 1e-24
Identities = 50/52 (96%), Positives = 51/52 (98%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 178 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +3
Query: 99 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGH+
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQ 178
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 109 bits (263), Expect = 5e-23
Identities = 46/52 (88%), Positives = 48/52 (92%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
QTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 37 QTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 88
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Frame = +3
Query: 510 IPELPLVVADKV---QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 680
+PE+PLV++ I KT AV L+ + A +D K S++LRAGKGK+R RR Q
Sbjct: 123 VPEVPLVISSTAFADAAIRKTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQ 182
Query: 681 RKGPLIIFNKDQ 716
R+GPL+I+N D+
Sbjct: 183 RRGPLVIYNPDE 194
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 109 bits (263), Expect = 5e-23
Identities = 46/52 (88%), Positives = 48/52 (92%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
QTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 60 QTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111
Score = 69.3 bits (162), Expect = 9e-11
Identities = 33/59 (55%), Positives = 40/59 (67%)
Frame = +3
Query: 81 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGH+
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQ 60
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Frame = +3
Query: 507 KIPELPLVVADKVQE---INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRI 677
++ E+PLV+ +V E I +T A L+ + A D+ KV S++LRAGKGK+R RR
Sbjct: 145 EVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRRHR 204
Query: 678 QRKGPLIIFN 707
QR+GPL++++
Sbjct: 205 QRRGPLVVYD 214
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 103 bits (248), Expect = 3e-21
Identities = 45/55 (81%), Positives = 47/55 (85%)
Frame = +2
Query: 242 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 406
G +TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRW 111
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/73 (39%), Positives = 47/73 (64%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 689
+ E+PLV ++ ++ + KTK A+ FL L ++ ++ KS +LRA GKMRNR+ G
Sbjct: 147 LKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRKYKISNG 206
Query: 690 PLIIFNKDQGLTR 728
PLII++ D G+ +
Sbjct: 207 PLIIYSXDSGIKK 219
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +3
Query: 72 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 252 HK 257
++
Sbjct: 60 YE 61
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 98.3 bits (234), Expect = 2e-19
Identities = 40/64 (62%), Positives = 51/64 (79%)
Frame = +2
Query: 218 EAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 397
+A + + G+ QTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ W
Sbjct: 49 QAYAVSKMSGY-QTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVW 107
Query: 398 RRWH 409
RRWH
Sbjct: 108 RRWH 111
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +3
Query: 84 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G++
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQ 60
Score = 38.7 bits (86), Expect = 0.14
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +3
Query: 516 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPL 695
E+P+VV D +++INKTK AV L + +++ ++ K G+ R+ R+ + GPL
Sbjct: 148 EVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKV------TGRARDGRKKRPVGPL 201
Query: 696 II 701
II
Sbjct: 202 II 203
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 97.9 bits (233), Expect = 2e-19
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = +2
Query: 260 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWH 111
Score = 77.4 bits (182), Expect = 3e-13
Identities = 32/70 (45%), Positives = 51/70 (72%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 689
+PE+PLVV D +Q KTK+A+ FL+ + A D+ +V S+ +RAG+GKMRNRR + R+G
Sbjct: 146 VPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRG 205
Query: 690 PLIIFNKDQG 719
P+++ ++G
Sbjct: 206 PMLVMPNNKG 215
Score = 66.1 bits (154), Expect = 8e-10
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +3
Query: 81 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSG 58
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 97.5 bits (232), Expect = 3e-19
Identities = 45/64 (70%), Positives = 47/64 (73%)
Frame = +2
Query: 218 EAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 397
+A + Q G Q SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K W
Sbjct: 51 QAHAVNPQAGM-QHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVW 109
Query: 398 RRWH 409
RRWH
Sbjct: 110 RRWH 113
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/75 (40%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 686
++P++PLVV DK++ KT A+ FL+R A+ D+ KV ++ +RAG K R ++ RK
Sbjct: 147 QVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGKKYRVRK 206
Query: 687 GPLII-FNKDQGLTR 728
GPL++ FN++ L +
Sbjct: 207 GPLVVYFNENAKLLK 221
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +3
Query: 87 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAG 60
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 96.3 bits (229), Expect = 7e-19
Identities = 40/64 (62%), Positives = 48/64 (75%)
Frame = +2
Query: 218 EAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 397
+A + G+ QTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ W
Sbjct: 49 QAYAISRMSGY-QTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTW 107
Query: 398 RRWH 409
R WH
Sbjct: 108 RHWH 111
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +3
Query: 78 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G++
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 662
+PELPLV+ D ++ + KT+ AV L + ++ +V ++R + KGK R
Sbjct: 146 VPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKR-KGKKR 195
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 93.5 bits (222), Expect = 5e-18
Identities = 41/52 (78%), Positives = 44/52 (84%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
Q SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 62 QHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFH 113
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRL-KAWSDILK-VYKSQRLRAGKGKMRNRRRIQR 683
+PELPLV+++++Q INKT AV F + K + +K + S +R GKGKMRNRRR+
Sbjct: 148 VPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRRVCA 207
Query: 684 KGPLIIFNKDQGLTR 728
GPL+++ +D G+ +
Sbjct: 208 VGPLVVYAEDNGIVK 222
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = +3
Query: 72 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 252 HK 257
H+
Sbjct: 61 HQ 62
Score = 34.7 bits (76), Expect = 2.3
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 442 LGGSVAATGVPALVQARGHIIERFPSFP 525
+ ++AATG P+LV ARGH I P P
Sbjct: 125 VAAAIAATGCPSLVMARGHRINNVPELP 152
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 93.1 bits (221), Expect = 6e-18
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = +2
Query: 257 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH
Sbjct: 57 TSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWH 107
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/68 (38%), Positives = 44/68 (64%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 689
IPE+P V+ D +++I KT+ + L L + I++ ++L++GKGKMRNRR + G
Sbjct: 142 IPEIPFVIEDSIEKIPKTRDLIKILTTLGI-NSIVRNKLKRKLKSGKGKMRNRRFKKPTG 200
Query: 690 PLIIFNKD 713
PL++F +
Sbjct: 201 PLLVFKNN 208
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 89.0 bits (211), Expect = 1e-16
Identities = 39/73 (53%), Positives = 57/73 (78%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 689
+PE+PLVV D I KT +AV L++L A++DI KV S+ +R+GKGKMRNRR +QR+G
Sbjct: 150 VPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMRNRRYVQRRG 209
Query: 690 PLIIFNKDQGLTR 728
PL+++++D G+TR
Sbjct: 210 PLVVYSEDNGVTR 222
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 129 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 215
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 89.0 bits (211), Expect = 1e-16
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 406
Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 58 QHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRW 108
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +3
Query: 519 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLI 698
LP++V+D + + KTK AV LR L ++ +V KS+ +R GKGKMRNRR QRKG LI
Sbjct: 147 LPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRRYTQRKGILI 206
Query: 699 I 701
+
Sbjct: 207 V 207
Score = 39.1 bits (87), Expect = 0.11
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = +3
Query: 93 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAG 56
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 88.6 bits (210), Expect = 1e-16
Identities = 39/63 (61%), Positives = 51/63 (80%)
Frame = +3
Query: 540 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFNKDQG 719
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR+G II+N+D G
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGSCIIYNEDNG 157
Query: 720 LTR 728
+ +
Sbjct: 158 IIK 160
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +2
Query: 194 SRFYVQELEAALLREQGGWSQTSAESWGTGRAVARIPRVRGGG 322
S + + + + E G+ QTSAESWGTGRA +PRVRGGG
Sbjct: 32 SNLHKNDSQPYAVSESAGY-QTSAESWGTGRARGPMPRVRGGG 73
Score = 35.1 bits (77), Expect = 1.8
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 177 DLVNDVHVSMSKNSRQPYCVSKEAGHK 257
D+VN VH ++ KN QPY VS+ AG++
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQ 51
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 88.6 bits (210), Expect = 1e-16
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
Q SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 61 QHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWH 112
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/71 (52%), Positives = 52/71 (73%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 689
+PELPLVV+D V++I KTK+AV L LKA D+ +S+R+R G GK RNRR QR+G
Sbjct: 147 VPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRRYTQRRG 206
Query: 690 PLIIFNKDQGL 722
LI+ ++++GL
Sbjct: 207 VLIVHDQNEGL 217
Score = 41.1 bits (92), Expect = 0.027
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +3
Query: 90 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGH+
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQ 61
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 82.2 bits (194), Expect = 1e-14
Identities = 36/53 (67%), Positives = 46/53 (86%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 665
++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 9 EVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 80.2 bits (189), Expect = 5e-14
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 406
Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 61 QHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKW 111
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/73 (49%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = +3
Query: 498 HY*KIPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRR 674
H +P++PLVV K + I KTKQAV L+++ A+SD+LKV S+ +RAG+GKMR R+
Sbjct: 143 HIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRKI 202
Query: 675 IQRKGPLIIFNKD 713
+RKGPL+++ D
Sbjct: 203 KERKGPLVVYGND 215
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +3
Query: 81 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAG 59
Score = 33.1 bits (72), Expect = 7.2
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 454 VAATGVPALVQARGHIIERFPSFPWL*PTKS 546
+AA+ VPALV ARGH I P P + +KS
Sbjct: 128 IAASAVPALVSARGHHIAGVPQIPLVVNSKS 158
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 74.5 bits (175), Expect = 2e-12
Identities = 29/53 (54%), Positives = 40/53 (75%)
Frame = +2
Query: 251 SQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 61 NQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWN 113
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/68 (45%), Positives = 43/68 (63%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 689
+PELPLV+ D + + KT A+ L++ A+ D K S + GKGKMRNRR I RKG
Sbjct: 10 VPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRNRRYISRKG 69
Query: 690 PLIIFNKD 713
PLI++ +
Sbjct: 70 PLIVYGME 77
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 70.5 bits (165), Expect = 4e-11
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 406
+ SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 58 KVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRW 108
Score = 66.1 bits (154), Expect = 8e-10
Identities = 28/74 (37%), Positives = 48/74 (64%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 686
++ E+P+VV D VQEI +T+ AV L+++ + D+ +V R+ KGK R +K
Sbjct: 143 EVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFRRAAYKTKK 202
Query: 687 GPLIIFNKDQGLTR 728
GPL+I+N+D+G+ +
Sbjct: 203 GPLVIYNEDKGIVK 216
Score = 41.9 bits (94), Expect = 0.015
Identities = 20/60 (33%), Positives = 39/60 (65%)
Frame = +3
Query: 78 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG K
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 67.7 bits (158), Expect = 3e-10
Identities = 26/71 (36%), Positives = 49/71 (69%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 689
+P LP+VV D+++ +NK ++ F + + W+D+ + ++R+RAGKGK R RR ++ K
Sbjct: 141 VPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGRRYVKPKS 200
Query: 690 PLIIFNKDQGL 722
LI+ ++D+G+
Sbjct: 201 VLIVVDEDEGI 211
Score = 41.5 bits (93), Expect = 0.020
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRW 406
+TSAESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 55 RTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDW 105
Score = 35.1 bits (77), Expect = 1.8
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +3
Query: 87 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHK 257
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFR 55
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 63.7 bits (148), Expect = 4e-09
Identities = 29/68 (42%), Positives = 44/68 (64%)
Frame = +3
Query: 510 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKG 689
+P +PLVV + KTK A+ ++ + D+ + S+ +RAG+GKMRNRR I RKG
Sbjct: 137 VPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNRRYITRKG 194
Query: 690 PLIIFNKD 713
PL+I+N +
Sbjct: 195 PLVIYNTE 202
Score = 52.8 bits (121), Expect = 8e-06
Identities = 27/51 (52%), Positives = 30/51 (58%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRW 406
Q +A SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 57 QCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRW 101
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = +3
Query: 87 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 251
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAG 55
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 60.5 bits (140), Expect = 4e-08
Identities = 24/71 (33%), Positives = 46/71 (64%)
Frame = +3
Query: 516 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPL 695
ELP VV+++++ + +TK R + ++D+ + + +R RAG+GKMR RR +++K L
Sbjct: 136 ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVKKKSVL 195
Query: 696 IIFNKDQGLTR 728
++ KD G+ +
Sbjct: 196 LVVGKDDGVVK 206
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/62 (46%), Positives = 41/62 (66%)
Frame = +3
Query: 516 ELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPL 695
+LP+VV D V+ INKTK A+ L+ L + DI + + + +RAG+GKMR RR Q K L
Sbjct: 140 KLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRRYKQPKSVL 199
Query: 696 II 701
I+
Sbjct: 200 IV 201
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/65 (38%), Positives = 39/65 (60%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 686
K+P LP+VV ++IN+ K+A L W D+ + + ++RAGKGKMR RR + K
Sbjct: 163 KVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRRYKEPK 222
Query: 687 GPLII 701
L++
Sbjct: 223 SVLVV 227
Score = 39.1 bits (87), Expect = 0.11
Identities = 22/57 (38%), Positives = 29/57 (50%)
Frame = +2
Query: 239 QGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 409
+G + S ES+G G +ARIPR +G R G F RGGR P K ++ H
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLH 129
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 57.2 bits (132), Expect = 4e-07
Identities = 21/73 (28%), Positives = 46/73 (63%)
Frame = +3
Query: 507 KIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRK 686
++ ++P V+ D+++ + TK+ + L DI++ K +++++GKGK+R R+ K
Sbjct: 136 ELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGRKYRTPK 195
Query: 687 GPLIIFNKDQGLT 725
GPL++ D+G++
Sbjct: 196 GPLVVVGNDRGIS 208
Score = 35.1 bits (77), Expect = 1.8
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 254 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 391
+T+AES+G+GR A +PRV+G S + AF GGR P +
Sbjct: 56 RTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPR 96
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 56.4 bits (130), Expect = 7e-07
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +3
Query: 531 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII-FN 707
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R ++ RKGPL++ FN
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKKYRVRKGPLVVYFN 60
Query: 708 KDQGLTR 728
++ L +
Sbjct: 61 ENAKLLK 67
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 52.8 bits (121), Expect = 8e-06
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +3
Query: 522 PLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLII 701
P+VV D + + T + FL+++ + D+ +V + R+RAGKGKMR R+ + GPLII
Sbjct: 147 PIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRKYKEPIGPLII 206
Score = 33.5 bits (73), Expect = 5.4
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 385
R+ +TSAES+G +AR+PRV+ SG+ A GGR+ P
Sbjct: 55 RDPNAGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFP 100
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 52.8 bits (121), Expect = 8e-06
Identities = 26/60 (43%), Positives = 40/60 (66%)
Frame = +3
Query: 528 VVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQRKGPLIIFN 707
+V D ++++ KTK+ L +L ++ +VY+ +R RAGKGK R R I+RKGPLI+ N
Sbjct: 154 IVVDGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKRRGRAYIERKGPLIVVN 212
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.5 bits (93), Expect = 0.020
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 319 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 423
W VR C+R HV WW +VR E L LAP QP
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 40.7 bits (91), Expect = 0.036
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 197 RFYVQELEAALL---REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 367
R ++ E A L R+ +TSA S G GR VAR+PR++G S + A NM RG
Sbjct: 46 RAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARG 100
Query: 368 GRMFAPTK 391
GR P +
Sbjct: 101 GRAAHPPR 108
Score = 39.5 bits (88), Expect = 0.082
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 492 RTHY*KIPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 668
R H LP+V+ V +I+ ++A L + + D+L+ + +R AGKGKMR R
Sbjct: 142 RGHRFSAETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGR 201
Query: 669 RRIQRKGPLII 701
R K L +
Sbjct: 202 RYKVPKSVLFV 212
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 293 ARIPRVRGGGTHRSGQGAFGNMCRGG 370
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 373
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 2.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 365 HDTCYRRHPDRTYEYHHHGHAEFGRQH 285
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_A2DPP4 Cluster: Phosphatidylinositol 3-and 4-kinase family
protein; n=1; Trichomonas vaginalis G3|Rep:
Phosphatidylinositol 3-and 4-kinase family protein -
Trichomonas vaginalis G3
Length = 2286
Score = 34.7 bits (76), Expect = 2.3
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -3
Query: 725 SQTLILVEDYEGSLTLDTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQE-DDSLFGLVDL 549
SQ LI+ +Y L ++ F TS+ + V LK + C Q+ + S++ ++DL
Sbjct: 1065 SQKLIIDSEYLRGKILPIAFLSCFLNTSSDQ-KEVFLKQLNDCFSLGQKINSSIYKIIDL 1123
Query: 548 LDFVGYN 528
L+ +GYN
Sbjct: 1124 LEMLGYN 1130
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 34.7 bits (76), Expect = 2.3
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 278 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 391
TG ARI R++GGG R G+ RGGR P K
Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 33.9 bits (74), Expect = 4.1
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 374 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 261
Y H+D Y +H D + HHHG +G H + +H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.5 bits (73), Expect = 5.4
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 350 RRHPDRTYEYHHHGHAEFGRQHVQ-YPMIQHWF 255
R PD + +HHHGH G HV+ YP F
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYPATDSLF 213
>UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 220
Score = 33.5 bits (73), Expect = 5.4
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 215 LEAALLREQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSG 337
L A+ R GG +T+ + G G AR+P RGG RSG
Sbjct: 100 LSASSGRAAGGGRETATRAGGGGPRSARVPGCRGGARSRSG 140
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 33.5 bits (73), Expect = 5.4
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3
Query: 377 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 261
TY+ H Y +HP T+ YHH H + ++ Q+P + H
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTH 149
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 33.5 bits (73), Expect = 5.4
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Frame = +1
Query: 280 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 444
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 445 GGSVAATGVPA 477
G+ + PA
Sbjct: 139 HGAPSCLSTPA 149
>UniRef50_UPI0000E47A9F Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 468
Score = 33.1 bits (72), Expect = 7.2
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = -3
Query: 467 PVAATLPPRPLSXXXXXXXXXXXXXASWGRTYVHHDTCYRRHPDRTYEYHHHG-HAEFGR 291
P+A +PP PL + R HH + HP + HHH ++ GR
Sbjct: 356 PIAFAVPPPPLHTSTTTKHNSWHSGVATSR---HHQ---QYHPPHHQQQHHHNKNSSQGR 409
Query: 290 QHVQYPMIQH-WFVTSLLAHAVGLPRVLGHRN 198
H P H TS + G PR + H N
Sbjct: 410 HHNNIPFRSHQGRNTSYNSSNYGKPRFIPHMN 441
>UniRef50_UPI0000383042 Cluster: hypothetical protein Magn03003854;
n=1; Magnetospirillum magnetotacticum MS-1|Rep:
hypothetical protein Magn03003854 - Magnetospirillum
magnetotacticum MS-1
Length = 547
Score = 33.1 bits (72), Expect = 7.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 209 QELEAALLREQGGWSQTSAESWGTGRAVARIPRVRGGG 322
+E++A L+R GW A G RA+ R+ +VRG G
Sbjct: 420 EEIDARLIRLAEGWGGAGAPLIGLARALLRLAQVRGRG 457
>UniRef50_Q0FF01 Cluster: Probable fatty acid desaturase protein;
n=1; alpha proteobacterium HTCC2255|Rep: Probable fatty
acid desaturase protein - alpha proteobacterium HTCC2255
Length = 347
Score = 33.1 bits (72), Expect = 7.2
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -3
Query: 374 YVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFVTSLLAHAV 228
YV H H DR E+ H A G H P+I HWF ++ H V
Sbjct: 238 YVQHQF-EDTHWDREEEWDMHKAALEGSSHYDLPLILHWFSANIGIHHV 285
>UniRef50_A6QTK7 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 273
Score = 33.1 bits (72), Expect = 7.2
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +2
Query: 242 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSG 337
G WS+ AE G G AV R RV GGG G
Sbjct: 165 GSWSRPGAERRGAGMAVEREERVLGGGREVDG 196
>UniRef50_UPI0000E23B66 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein, partial - Pan troglodytes
Length = 366
Score = 32.7 bits (71), Expect = 9.5
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAVARIPRVRGGGT-HRSGQGAFGNMCRGGRMFAPTKPWR 400
R QGG A + G +A+A + RGGG RSG+G+ C G + P PWR
Sbjct: 244 RRQGGKKPQKAAAAGGQKALAAGAKSRGGGAKSRSGRGS--KRCGGQK---PLAPWR 295
>UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 1; n=2; Roseiflexus|Rep: HAD-superfamily
hydrolase, subfamily IA, variant 1 - Roseiflexus sp.
RS-1
Length = 223
Score = 32.7 bits (71), Expect = 9.5
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 153 RTGGA-WLHPAPSHSSLSTPTLKVGLPIDSFRYFSEAIPP 37
R GG WLH A SH P +++GLP+ E +PP
Sbjct: 163 RIGGLRWLHAAQSHFHDVVPAVQMGLPVAWINRKHEPLPP 202
>UniRef50_A0V889 Cluster: AsmA precursor; n=3; Comamonadaceae|Rep:
AsmA precursor - Delftia acidovorans SPH-1
Length = 791
Score = 32.7 bits (71), Expect = 9.5
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +1
Query: 280 WTCCRPNSACPWWWYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGGSVA 459
WT RP S P W + + V W VR A L QPP+ + G V
Sbjct: 275 WTFKRPESTGPRWRFQVAQLSLRGGLVGWSDGVRQMAVRARLDSLVQPPSPDFPYGMRVG 334
Query: 460 ATG--VPALVQARGHI 501
TG A V+A+G I
Sbjct: 335 LTGRIAKATVEAQGLI 350
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 380 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 288
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
>UniRef50_Q7F729 Cluster: OSJNBa0004B13.22 protein; n=2; Oryza
sativa (japonica cultivar-group)|Rep: OSJNBa0004B13.22
protein - Oryza sativa subsp. japonica (Rice)
Length = 248
Score = 32.7 bits (71), Expect = 9.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 402 VGTVASTSDSGERPWRQRCCYRRPSARS 485
+GT AS G+RPW R C+ R RS
Sbjct: 106 IGTAASIFSGGQRPWACRSCHLRGGCRS 133
>UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein
OJ1031_C12.31; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1031_C12.31 - Oryza sativa subsp. japonica (Rice)
Length = 214
Score = 32.7 bits (71), Expect = 9.5
Identities = 36/107 (33%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Frame = +2
Query: 62 RNESIGSPTFSVGVLREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQ 241
R ++G P VG R GA + P +G GP R + ELEA + +
Sbjct: 32 RRGAVGRPG-GVGARRR--GGAAAASGPAACGRGGVVEGPS---GRRH-GELEAVAAKWR 84
Query: 242 GGWSQTSAESWGTGRAVARIPRVRGGGTH-RSGQGAFGNMCRGGRMF 379
G TS +G A A PR GGG+ RSG A+ RGG F
Sbjct: 85 SGGVATSRRWRPSGIAAAWRPRGGGGGSEWRSGAAAW--RARGGAAF 129
>UniRef50_Q5VSH5 Cluster: Chromosome 1 open reading frame 122; n=2;
Eutheria|Rep: Chromosome 1 open reading frame 122 - Homo
sapiens (Human)
Length = 159
Score = 32.7 bits (71), Expect = 9.5
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 233 REQGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGN--MCRGGRMFAPTKPWRRW 406
RE+G W + SA A++R R+ R G G+ G R GR AP+ W RW
Sbjct: 18 REEGAWPRASAGPDRLSLALSRAGRLPAWTAGRRGWGSAGGHPHSRPGRS-APSSCWTRW 76
>UniRef50_P14653 Cluster: Homeobox protein Hox-B1; n=29;
Euteleostomi|Rep: Homeobox protein Hox-B1 - Homo sapiens
(Human)
Length = 301
Score = 32.7 bits (71), Expect = 9.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 518 ASPGCSRQSPGDQQDQTGCHLPEAPQGMV 604
A PGC +++ GD DQ+ C PEA V
Sbjct: 271 APPGCPKEAAGDASDQSTCTSPEASPSSV 299
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,729,146
Number of Sequences: 1657284
Number of extensions: 15176320
Number of successful extensions: 52864
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 48585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52377
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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