Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30454
         (328 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    82   2e-15
UniRef50_Q1YKB3 Cluster: Putative uncharacterized protein; n=1; ...    32   2.8  
UniRef50_Q0U1R0 Cluster: Predicted protein; n=1; Phaeosphaeria n...    32   2.8  
UniRef50_UPI000155C727 Cluster: PREDICTED: similar to laminin be...    31   3.7  
UniRef50_A3PZT1 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_O62471 Cluster: Putative uncharacterized protein qui-1;...    31   6.5  
UniRef50_A5AL10 Cluster: Putative uncharacterized protein; n=1; ...    30   8.6  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 82.2 bits (194), Expect = 2e-15
 Identities = 38/66 (57%), Positives = 47/66 (71%)
 Frame = +1

Query: 1   VNAVGGAVIYGTGGLLTPLVAPVLXXXXXXXXXXXXXXXXXXYYGNLMAGSIVSQLTAAA 180
           VN VGGA+IYGTGGLLTP+VAP+L                  YYGN++AGS++SQLT+AA
Sbjct: 9   VNLVGGAIIYGTGGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNVVAGSVISQLTSAA 68

Query: 181 MVAPTP 198
           M+APTP
Sbjct: 69  MLAPTP 74


>UniRef50_Q1YKB3 Cluster: Putative uncharacterized protein; n=1;
           Aurantimonas sp. SI85-9A1|Rep: Putative uncharacterized
           protein - Aurantimonas sp. SI85-9A1
          Length = 215

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +3

Query: 57  SGSRARFQLSGNS-GRKHSRCCTSILRKFNGR-QHCVTVDCCCHGSPH 194
           +G R+  + SGN  G+   R C     +  GR Q CV     CHGSP+
Sbjct: 71  AGQRSEPRHSGNERGKAEQRWCVDESNRRGGRSQLCVAAAMRCHGSPN 118


>UniRef50_Q0U1R0 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 82

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 93  SGRKHSRCCTSILRKFNGRQHCVTVDCCCHGSP 191
           SG     C       F+G  HCV+  CCC+G P
Sbjct: 36  SGTYQIACVECPCDGFDGPCHCVSDGCCCNGGP 68


>UniRef50_UPI000155C727 Cluster: PREDICTED: similar to laminin beta
            2-like chain; n=1; Ornithorhynchus anatinus|Rep:
            PREDICTED: similar to laminin beta 2-like chain -
            Ornithorhynchus anatinus
          Length = 1850

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 17/34 (50%), Positives = 19/34 (55%)
 Frame = -2

Query: 186  YHGSSSQL*HNAAGH*ISVVCLCSSGCASCRYSR 85
            YHGSS Q    A GH   +VCLC+ G A  R  R
Sbjct: 943  YHGSSCQ----ADGHTGQIVCLCAPGYAGSRCDR 972


>UniRef50_A3PZT1 Cluster: Putative uncharacterized protein; n=1;
           Mycobacterium sp. JLS|Rep: Putative uncharacterized
           protein - Mycobacterium sp. (strain JLS)
          Length = 82

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 111 RCCTSILRKFNGRQHCVTVDCCCHGSPHAMR 203
           R   S+ R+  GR HCV +DC    S  A R
Sbjct: 27  RSSVSVQRRRGGRDHCVAIDCFAGRSVQAKR 57


>UniRef50_O62471 Cluster: Putative uncharacterized protein qui-1; n=2;
            Caenorhabditis|Rep: Putative uncharacterized protein
            qui-1 - Caenorhabditis elegans
          Length = 1592

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -2

Query: 186  YHGSSSQL*HNAAGH*ISVVCLCSSGCASCRYSR*AETEHGSH*WSQQTPS 34
            YH +S QL     GH  +V CLCSS  +S   S   +       +SQ TP+
Sbjct: 896  YHIASEQLIGTFKGHTAAVTCLCSSNDSSLFVSTSFDKTVNVWVFSQSTPT 946


>UniRef50_A5AL10 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 495

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 9   GRRCCNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSILRKFNGRQH 155
           G RC  IW W ++     S A+ +L   SG  H R   S L++   R+H
Sbjct: 334 GSRCSRIWVWRNI-----SAAQLRLGRXSGLPHRRKKXSALQQILHREH 377


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,868,507
Number of Sequences: 1657284
Number of extensions: 6132773
Number of successful extensions: 14638
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14621
length of database: 575,637,011
effective HSP length: 85
effective length of database: 434,767,871
effective search space used: 9999661033
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)